| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is wcaI [H]
Identifier: 15602875
GI number: 15602875
Start: 1191517
End: 1192737
Strand: Direct
Name: wcaI [H]
Synonym: PM1010
Alternate gene names: 15602875
Gene position: 1191517-1192737 (Clockwise)
Preceding gene: 15602874
Following gene: 15602876
Centisome position: 52.78
GC content: 38.33
Gene sequence:
>1221_bases ATGAAGATTTTACTATTAACTCAATGGTTTGAGCCCGAGCCAGCTATTAAAGGGTTGGCATTTGCAAAAGAATTAAAAGC GCAGGGACATGACGTACAAGTCTTAACTGGCTTTCCGAATTATCCCGGCGGAAAAATATATGAAGGTTATAAACTTCGAT TTTTCCAAAAAGAATGCATTGAAGGCATTCCTGTATTAAGGGTGGCGCTCTACCCAAGCCATGATAGCTCAGCCATAAAA CGCATTCTCAATTATGTCAGCTTTGCCTTTATGGCAATGTTATTCGGTATCTTTGCGACCAAAAAATGTGATGTTATTTA TGCCTATCACCCTCCTTTAACAACAGGCATCGCCGCCATCATGATTAAACTTTTTAGACGGACACCCGTTATCTATGATA TTCAAGATTTATGGCCAGATACTTTAAAAGCCACTGGCATGCTAACGCATGATCGATTACTAAAAATCGTCGATTACGTC TGCCAATGTGTTTATAAATGTGTTGATCATATTGTGGTTTTAAGCCCCGGCTTTAAAGAAAAACTCATCCAAAAATCCGT TCCCGCAAATAAAATCAGCGTGATCTATAACTGGTGTAACGAAACTGCGCTAATCAACACTGAAACGTCACAGACTGTTC ATTTATGTCACCAAAAATTCAATGTTCTTTTTGCTGGCAATATGGGAAAAGCGCAAGCCCTCGATACGATACTGGATGTC GCAGCTAATATGCATCCTTATCCTGATATTCATTTTACCTTTATCGGTTCTGGTACAGAAACAACACGCTTAAACACGAG AAAAGATGATGAAAATTTAACGAATGTGACTTTTATACCACGTGTACCGATGTCTCAAATCGGTCATGTATTACAACAAG CAGATTTATTACTAGTTCATCTGAAGCAAGACGCGTTATTTGAAATCACGGTTCCCTCAAAAATACAGGCGTATATGGCA ATAGGAAAACCCATTTTAGTTGCGGTACCAGGAGATGCGAGCAATTTAGTGAGGCTCGCACAATGTGGAGAAACCGCGCT ATCAGAAAATATCGAGAGCATACAACGTGCCATTTTGAAAATGTATCACTTGCCGGCACAAACACGCCATCTTTTAGGCA AAAATGGGAATACTTTCTATTTTAATGAATTATCTTTGCAAAAGGGTACTGAGAAATTTATTGAATTGTTTAAAAAAATA AAACCTGAAAAATCAGTTTGA
Upstream 100 bases:
>100_bases TAGTCGCAGATTACAGTATGCCGAATGTAAGTGCCAAAGTGATACGTATCCTTTTAAGTTATACCGATTATGTTAACCGC GTTATTTGGAAAAAATACTG
Downstream 100 bases:
>100_bases TATTCAGCTCACAACTTCGTAAACAGCTTAGGAGAGTGGAACAATGCTAAAACGTTTTCTCGATATTGTGATTTCAGCCA CTGCGCTAATTTTACTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MKILLLTQWFEPEPAIKGLAFAKELKAQGHDVQVLTGFPNYPGGKIYEGYKLRFFQKECIEGIPVLRVALYPSHDSSAIK RILNYVSFAFMAMLFGIFATKKCDVIYAYHPPLTTGIAAIMIKLFRRTPVIYDIQDLWPDTLKATGMLTHDRLLKIVDYV CQCVYKCVDHIVVLSPGFKEKLIQKSVPANKISVIYNWCNETALINTETSQTVHLCHQKFNVLFAGNMGKAQALDTILDV AANMHPYPDIHFTFIGSGTETTRLNTRKDDENLTNVTFIPRVPMSQIGHVLQQADLLLVHLKQDALFEITVPSKIQAYMA IGKPILVAVPGDASNLVRLAQCGETALSENIESIQRAILKMYHLPAQTRHLLGKNGNTFYFNELSLQKGTEKFIELFKKI KPEKSV
Sequences:
>Translated_406_residues MKILLLTQWFEPEPAIKGLAFAKELKAQGHDVQVLTGFPNYPGGKIYEGYKLRFFQKECIEGIPVLRVALYPSHDSSAIK RILNYVSFAFMAMLFGIFATKKCDVIYAYHPPLTTGIAAIMIKLFRRTPVIYDIQDLWPDTLKATGMLTHDRLLKIVDYV CQCVYKCVDHIVVLSPGFKEKLIQKSVPANKISVIYNWCNETALINTETSQTVHLCHQKFNVLFAGNMGKAQALDTILDV AANMHPYPDIHFTFIGSGTETTRLNTRKDDENLTNVTFIPRVPMSQIGHVLQQADLLLVHLKQDALFEITVPSKIQAYMA IGKPILVAVPGDASNLVRLAQCGETALSENIESIQRAILKMYHLPAQTRHLLGKNGNTFYFNELSLQKGTEKFIELFKKI KPEKSV >Mature_406_residues MKILLLTQWFEPEPAIKGLAFAKELKAQGHDVQVLTGFPNYPGGKIYEGYKLRFFQKECIEGIPVLRVALYPSHDSSAIK RILNYVSFAFMAMLFGIFATKKCDVIYAYHPPLTTGIAAIMIKLFRRTPVIYDIQDLWPDTLKATGMLTHDRLLKIVDYV CQCVYKCVDHIVVLSPGFKEKLIQKSVPANKISVIYNWCNETALINTETSQTVHLCHQKFNVLFAGNMGKAQALDTILDV AANMHPYPDIHFTFIGSGTETTRLNTRKDDENLTNVTFIPRVPMSQIGHVLQQADLLLVHLKQDALFEITVPSKIQAYMA IGKPILVAVPGDASNLVRLAQCGETALSENIESIQRAILKMYHLPAQTRHLLGKNGNTFYFNELSLQKGTEKFIELFKKI KPEKSV
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788363, Length=389, Percent_Identity=25.4498714652956, Blast_Score=92, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 45747; Mature: 45747
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILLLTQWFEPEPAIKGLAFAKELKAQGHDVQVLTGFPNYPGGKIYEGYKLRFFQKECI CEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEECCCEEEEEHHHHH EGIPVLRVALYPSHDSSAIKRILNYVSFAFMAMLFGIFATKKCDVIYAYHPPLTTGIAAI CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHH MIKLFRRTPVIYDIQDLWPDTLKATGMLTHDRLLKIVDYVCQCVYKCVDHIVVLSPGFKE HHHHHHCCCCEEEHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHH KLIQKSVPANKISVIYNWCNETALINTETSQTVHLCHQKFNVLFAGNMGKAQALDTILDV HHHHHCCCCCCEEEEEEECCCCEEEECCCHHHHHHHHHHCCEEEECCCCHHHHHHHHHHH AANMHPYPDIHFTFIGSGTETTRLNTRKDDENLTNVTFIPRVPMSQIGHVLQQADLLLVH HHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCEEEEE LKQDALFEITVPSKIQAYMAIGKPILVAVPGDASNLVRLAQCGETALSENIESIQRAILK ECCCCEEEEECCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCHHHHHHHHHHHHHHHHH MYHLPAQTRHLLGKNGNTFYFNELSLQKGTEKFIELFKKIKPEKSV HHHCCHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKILLLTQWFEPEPAIKGLAFAKELKAQGHDVQVLTGFPNYPGGKIYEGYKLRFFQKECI CEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEECCCEEEEEHHHHH EGIPVLRVALYPSHDSSAIKRILNYVSFAFMAMLFGIFATKKCDVIYAYHPPLTTGIAAI CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHH MIKLFRRTPVIYDIQDLWPDTLKATGMLTHDRLLKIVDYVCQCVYKCVDHIVVLSPGFKE HHHHHHCCCCEEEHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHH KLIQKSVPANKISVIYNWCNETALINTETSQTVHLCHQKFNVLFAGNMGKAQALDTILDV HHHHHCCCCCCEEEEEEECCCCEEEECCCHHHHHHHHHHCCEEEECCCCHHHHHHHHHHH AANMHPYPDIHFTFIGSGTETTRLNTRKDDENLTNVTFIPRVPMSQIGHVLQQADLLLVH HHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCEEEEE LKQDALFEITVPSKIQAYMAIGKPILVAVPGDASNLVRLAQCGETALSENIESIQRAILK ECCCCEEEEECCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCHHHHHHHHHHHHHHHHH MYHLPAQTRHLLGKNGNTFYFNELSLQKGTEKFIELFKKIKPEKSV HHHCCHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7815923; 8759852; 9097040; 9278503 [H]