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The map label for this gene is rfbP [H]

Identifier: 15602876

GI number: 15602876

Start: 1192781

End: 1193383

Strand: Direct

Name: rfbP [H]

Synonym: PM1011

Alternate gene names: 15602876

Gene position: 1192781-1193383 (Clockwise)

Preceding gene: 15602875

Following gene: 15602877

Centisome position: 52.84

GC content: 39.14

Gene sequence:

>603_bases
ATGCTAAAACGTTTTCTCGATATTGTGATTTCAGCCACTGCGCTAATTTTACTTTCTCCCCTATTTTTAATTATTGCTTA
TCAAGTAAAAAAAAATCTAGGGACGCCTATTTTATTTCATCAGATGCGCCCTGGGCGATATGGTAAAGCATTTAACATGA
TCAAATTCCGCACAATGAAGGACAGCAGAAATGAAAAAGGCGAACTTTTACCTGATAGTGAACGATTAACACCCTTTGGT
CATTTCCTACGTTCAAGTAGCCTAGATGAGTTACCGGAATTATGGAATGTCTTAAAAGGCGATATGAGTTTAGTTGGACC
TCGTCCTCTCTTAATGGAATATCTCCCCTTATACAATGCTGAACAAGCTAAACGGCATAACGTGCGCCCCGGCATTACCG
GTTATGCCCAAGTTAACGGGCGTAATGCAATCAGTTGGGAACAAAAATTCAAATTAGATGTTTGGTACGTAGAAAATCAA
TCGTTGTGGCTAGATATCAAGATTCTCTTGAAAACCCTCAACGTCGTCATTTTTCGCAAAAATGTTAACGATCAATCGGG
GCATTCGATGCCGAGATTTTTAGGTGATACGGAGAAAAAATAA

Upstream 100 bases:

>100_bases
GGTACTGAGAAATTTATTGAATTGTTTAAAAAAATAAAACCTGAAAAATCAGTTTGATATTCAGCTCACAACTTCGTAAA
CAGCTTAGGAGAGTGGAACA

Downstream 100 bases:

>100_bases
GATGAATACTTCTGTAACATGTACGCTTGTTGAGATCGATCATGAATGGGATAACAAGATTCAATCCTTTGACTTCGATA
TTTATCACATGTCTGGTTGG

Product: RfbP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MLKRFLDIVISATALILLSPLFLIIAYQVKKNLGTPILFHQMRPGRYGKAFNMIKFRTMKDSRNEKGELLPDSERLTPFG
HFLRSSSLDELPELWNVLKGDMSLVGPRPLLMEYLPLYNAEQAKRHNVRPGITGYAQVNGRNAISWEQKFKLDVWYVENQ
SLWLDIKILLKTLNVVIFRKNVNDQSGHSMPRFLGDTEKK

Sequences:

>Translated_200_residues
MLKRFLDIVISATALILLSPLFLIIAYQVKKNLGTPILFHQMRPGRYGKAFNMIKFRTMKDSRNEKGELLPDSERLTPFG
HFLRSSSLDELPELWNVLKGDMSLVGPRPLLMEYLPLYNAEQAKRHNVRPGITGYAQVNGRNAISWEQKFKLDVWYVENQ
SLWLDIKILLKTLNVVIFRKNVNDQSGHSMPRFLGDTEKK
>Mature_200_residues
MLKRFLDIVISATALILLSPLFLIIAYQVKKNLGTPILFHQMRPGRYGKAFNMIKFRTMKDSRNEKGELLPDSERLTPFG
HFLRSSSLDELPELWNVLKGDMSLVGPRPLLMEYLPLYNAEQAKRHNVRPGITGYAQVNGRNAISWEQKFKLDVWYVENQ
SLWLDIKILLKTLNVVIFRKNVNDQSGHSMPRFLGDTEKK

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=196, Percent_Identity=39.2857142857143, Blast_Score=128, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 23160; Mature: 23160

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRFLDIVISATALILLSPLFLIIAYQVKKNLGTPILFHQMRPGRYGKAFNMIKFRTMK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEEEECC
DSRNEKGELLPDSERLTPFGHFLRSSSLDELPELWNVLKGDMSLVGPRPLLMEYLPLYNA
CCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCHHHHHHHCCCCC
EQAKRHNVRPGITGYAQVNGRNAISWEQKFKLDVWYVENQSLWLDIKILLKTLNVVIFRK
HHHHHCCCCCCCCEEEEECCCCCCCHHHHEEEEEEEEECCCEEEHHHHHHHHHHEEEEEC
NVNDQSGHSMPRFLGDTEKK
CCCCCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MLKRFLDIVISATALILLSPLFLIIAYQVKKNLGTPILFHQMRPGRYGKAFNMIKFRTMK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEEEECC
DSRNEKGELLPDSERLTPFGHFLRSSSLDELPELWNVLKGDMSLVGPRPLLMEYLPLYNA
CCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCHHHHHHHCCCCC
EQAKRHNVRPGITGYAQVNGRNAISWEQKFKLDVWYVENQSLWLDIKILLKTLNVVIFRK
HHHHHCCCCCCCCEEEEECCCCCCCHHHHEEEEEEEEECCCEEEHHHHHHHHHHEEEEEC
NVNDQSGHSMPRFLGDTEKK
CCCCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]