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The map label for this gene is pal

Identifier: 15602831

GI number: 15602831

Start: 1138982

End: 1139434

Strand: Reverse

Name: pal

Synonym: PM0966

Alternate gene names: 15602831

Gene position: 1139434-1138982 (Counterclockwise)

Preceding gene: 15602832

Following gene: 15602830

Centisome position: 50.47

GC content: 39.07

Gene sequence:

>453_bases
ATGAAAAAACTAACTAAAGTATTATTAGTTGCTGGTTCTGTTGCTGTATTAGCTGCTTGTGGTTCATCTAAAAAAGATGA
AAGCGCTGGTCAAATGTTTGGCGGTTATTCAGTACAAGATTTACAACAACGTTATAATACCGTGTATTTCGGCTTCGATA
AATACAATATCGAAGGTGAATATGTACAAATTTTAGATGCACATGCGGCGTTCTTAAATGCAACACCAGCAACGAAAGTC
GTTGTTGAAGGTAACACCGATGAACGCGGTACACCAGAATATAACATCGCATTAGGTCAACGTCGTGCAGATGCAGTAAA
ACATTATTTATCAGCGAAAGGTGTACAAGCTGGTCAAGTATCAACAGTTTCTTACGGTGAAGAGAAACCTGCTGTGTTAG
GTCACGATGAAGCAGCTTACTCTAAAAACCGTCGTGCTGTGTTAGCATACTAA

Upstream 100 bases:

>100_bases
ACGGTCGTTTTAAAGCACGGTTACCAGGAAATGATGGACAAGTTAAATTCCCAGCTTGGTCACCTTATTTAACTAAATAA
AAAACTCTAAGGAGAAAACA

Downstream 100 bases:

>100_bases
TTTATTTTTCTGTCTAAAAACTGGGTGCATTCGCGCCCAGTTTTTTTATGTGTGGAATTTTACTTGTAGTGAGAAAGGCG
AGAATTACGGTCTTTTGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: OMP P6; P6-like; Peptidoglycan-associated lipoprotein

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MKKLTKVLLVAGSVAVLAACGSSKKDESAGQMFGGYSVQDLQQRYNTVYFGFDKYNIEGEYVQILDAHAAFLNATPATKV
VVEGNTDERGTPEYNIALGQRRADAVKHYLSAKGVQAGQVSTVSYGEEKPAVLGHDEAAYSKNRRAVLAY

Sequences:

>Translated_150_residues
MKKLTKVLLVAGSVAVLAACGSSKKDESAGQMFGGYSVQDLQQRYNTVYFGFDKYNIEGEYVQILDAHAAFLNATPATKV
VVEGNTDERGTPEYNIALGQRRADAVKHYLSAKGVQAGQVSTVSYGEEKPAVLGHDEAAYSKNRRAVLAY
>Mature_150_residues
MKKLTKVLLVAGSVAVLAACGSSKKDESAGQMFGGYSVQDLQQRYNTVYFGFDKYNIEGEYVQILDAHAAFLNATPATKV
VVEGNTDERGTPEYNIALGQRRADAVKHYLSAKGVQAGQVSTVSYGEEKPAVLGHDEAAYSKNRRAVLAY

Specific function: Thought to play a role in bacterial envelope integrity. Links the outer membrane to the peptidoglycan layer

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain

Homologues:

Organism=Escherichia coli, GI1786962, Length=171, Percent_Identity=52.046783625731, Blast_Score=167, Evalue=4e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAL_PASMU (Q51886)

Other databases:

- EMBL:   U16849
- EMBL:   AE004439
- RefSeq:   NP_245903.1
- ProteinModelPortal:   Q51886
- SMR:   Q51886
- GeneID:   1244313
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM0966
- HOGENOM:   HBG751251
- OMA:   ASKGETE
- ProtClustDB:   CLSK870313
- BioCyc:   PMUL272843:PM0966-MONOMER
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169
- Gene3D:   G3DSA:3.30.1330.60
- PRINTS:   PR01021
- TIGRFAMs:   TIGR02802

Pfam domain/function: PF00691 OmpA; SSF103088 OmpA/MotB_C

EC number: NA

Molecular weight: Translated: 16213; Mature: 16213

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: PS01068 OMPA_1; PS51123 OMPA_2; PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLTKVLLVAGSVAVLAACGSSKKDESAGQMFGGYSVQDLQQRYNTVYFGFDKYNIEGE
CCHHHHHHHHHCCHHEEEECCCCCCCCCCHHHCCCCCHHHHHHHHCEEEECCEEECCCCC
YVQILDAHAAFLNATPATKVVVEGNTDERGTPEYNIALGQRRADAVKHYLSAKGVQAGQV
EEEEEEHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCE
STVSYGEEKPAVLGHDEAAYSKNRRAVLAY
EEECCCCCCCCEECCCHHHHCCCCEEEEEC
>Mature Secondary Structure
MKKLTKVLLVAGSVAVLAACGSSKKDESAGQMFGGYSVQDLQQRYNTVYFGFDKYNIEGE
CCHHHHHHHHHCCHHEEEECCCCCCCCCCHHHCCCCCHHHHHHHHCEEEECCEEECCCCC
YVQILDAHAAFLNATPATKVVVEGNTDERGTPEYNIALGQRRADAVKHYLSAKGVQAGQV
EEEEEEHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCE
STVSYGEEKPAVLGHDEAAYSKNRRAVLAY
EEECCCCCCCCEECCCHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7868272; 11248100