Click here to switch to the map view.

The map label for this gene is ycjF [C]

Identifier: 15602774

GI number: 15602774

Start: 1067531

End: 1068607

Strand: Reverse

Name: ycjF [C]

Synonym: PM0909

Alternate gene names: 15602774

Gene position: 1068607-1067531 (Counterclockwise)

Preceding gene: 15602775

Following gene: 15602773

Centisome position: 47.34

GC content: 41.41

Gene sequence:

>1077_bases
ATGAATGAAAAACGTCTTTTTACTGAAGCACAGACGGAAAATGAGGCTGTGGATTTTACCCCTAAACGCGAATTTCATGG
TGAGATGCATATTGAAAAAGACGAGCCTGTGATAGAGGATAGGTTTGTTGAACAGACTTTTGAGCATATTGTGCAACCGC
GATCTCGCTGGTGGAAAACAGGTTTGGCACTGACCGCACTTTTATTTTGTTTTGCAGTGATTGCTCAATCAATTCAATGG
TTAGTGGACACTTGGCAGCAAAACCAATGGATTTACTTTGTGTTTTCATTAGTGACATGCTTGGTGGTACTATTAGGGGT
CTCATCACTGGGTAAAGAGTGGCTACGCCTCGTCAAGTTGAAAAAAAGACTTTCATTACAGCAAAAAAGCCAACAAATAT
TGCGAGAAAGTGCGGTCAATTTAGGGCAAGATTTTTGTGCTGAAAAACATCAGCAGATTAAAGCATTGTGTACAGAGATG
GCGCAGATGCTTAAGCTCTCTTCAGAAGATCCAGGTTTAATACAATGGCAAAACCAATTGCATGACGCATATTCAGCGCA
AGAAGTGGCGCATTTATTTAGTCAGACCGTGTTACATCCCTTTGATGTACAAATTAAAAAATTGATCAGCAAAAGTGCGC
TAGAGGCGGCAGTGATCGTCGCAGTCAGCCCATTAGCGGTGATCGATATGTTTTTTCTGTCTTGGCGTAACATTCGTTTG
GTCAATCAAATTGCCCAAATTTATGGGATTGAGCTAGGTTATTGGAGCCGCTTACGTTTATTAAAAATGGTACTCCTTAA
TCTTGCTTTTGCAGGTGCGACAGAAGTTGTGCAAGATATTGGTTTAGACTGGTTGTCACAGGATTTGACCGCAAAACTGT
CGGCGCGTGCAGCCCAAGGCATCGGTGTTGGCTTATTAACAGCACGTTTAGGGATTAAAGCTATGGAATTTTGCCGCCCT
TTAGCTTTTCAAGCTGGTGAGAAACCGCGTTTAAATCATATACAACAGGAACTCTTGGGCCAATTAAGAAGTACGTTTTT
TCGTTCCAATAAAACGAAAGTCAAACAGCAAGTTTAA

Upstream 100 bases:

>100_bases
CGCAGTTATTAGCCTCGGGCGAAAACATACCGCATTTACGTATGGATTCGGTATTACAGTTTCTGTTAGGTGATAAGTTT
TAGTGAGGTAGAGTATACAT

Downstream 100 bases:

>100_bases
AATGTAAATTTATCTTTCCAGTGTTTCTTTAATCTTTACAGTTTTAGTGCTATCATAGAGCCATTTTTTACGAGTGAGGA
AATGTTATGTCCTTGAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MNEKRLFTEAQTENEAVDFTPKREFHGEMHIEKDEPVIEDRFVEQTFEHIVQPRSRWWKTGLALTALLFCFAVIAQSIQW
LVDTWQQNQWIYFVFSLVTCLVVLLGVSSLGKEWLRLVKLKKRLSLQQKSQQILRESAVNLGQDFCAEKHQQIKALCTEM
AQMLKLSSEDPGLIQWQNQLHDAYSAQEVAHLFSQTVLHPFDVQIKKLISKSALEAAVIVAVSPLAVIDMFFLSWRNIRL
VNQIAQIYGIELGYWSRLRLLKMVLLNLAFAGATEVVQDIGLDWLSQDLTAKLSARAAQGIGVGLLTARLGIKAMEFCRP
LAFQAGEKPRLNHIQQELLGQLRSTFFRSNKTKVKQQV

Sequences:

>Translated_358_residues
MNEKRLFTEAQTENEAVDFTPKREFHGEMHIEKDEPVIEDRFVEQTFEHIVQPRSRWWKTGLALTALLFCFAVIAQSIQW
LVDTWQQNQWIYFVFSLVTCLVVLLGVSSLGKEWLRLVKLKKRLSLQQKSQQILRESAVNLGQDFCAEKHQQIKALCTEM
AQMLKLSSEDPGLIQWQNQLHDAYSAQEVAHLFSQTVLHPFDVQIKKLISKSALEAAVIVAVSPLAVIDMFFLSWRNIRL
VNQIAQIYGIELGYWSRLRLLKMVLLNLAFAGATEVVQDIGLDWLSQDLTAKLSARAAQGIGVGLLTARLGIKAMEFCRP
LAFQAGEKPRLNHIQQELLGQLRSTFFRSNKTKVKQQV
>Mature_358_residues
MNEKRLFTEAQTENEAVDFTPKREFHGEMHIEKDEPVIEDRFVEQTFEHIVQPRSRWWKTGLALTALLFCFAVIAQSIQW
LVDTWQQNQWIYFVFSLVTCLVVLLGVSSLGKEWLRLVKLKKRLSLQQKSQQILRESAVNLGQDFCAEKHQQIKALCTEM
AQMLKLSSEDPGLIQWQNQLHDAYSAQEVAHLFSQTVLHPFDVQIKKLISKSALEAAVIVAVSPLAVIDMFFLSWRNIRL
VNQIAQIYGIELGYWSRLRLLKMVLLNLAFAGATEVVQDIGLDWLSQDLTAKLSARAAQGIGVGLLTARLGIKAMEFCRP
LAFQAGEKPRLNHIQQELLGQLRSTFFRSNKTKVKQQV

Specific function: Unknown

COG id: COG3768

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0283 family

Homologues:

Organism=Escherichia coli, GI1787582, Length=343, Percent_Identity=39.6501457725948, Blast_Score=258, Evalue=4e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y909_PASMU (Q9CMC3)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_245846.1
- GeneID:   1244256
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM0909
- NMPDR:   fig|272843.1.peg.909
- HOGENOM:   HBG678275
- OMA:   IVGLYAH
- ProtClustDB:   PRK05415
- BioCyc:   PMUL272843:PM0909-MONOMER
- HAMAP:   MF_01085
- InterPro:   IPR021147
- InterPro:   IPR006507
- TIGRFAMs:   TIGR01620

Pfam domain/function: PF05128 DUF697

EC number: NA

Molecular weight: Translated: 40977; Mature: 40977

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd746b4c)-; HASH(0xda97818)-; HASH(0xdcc7848)-;

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEKRLFTEAQTENEAVDFTPKREFHGEMHIEKDEPVIEDRFVEQTFEHIVQPRSRWWKT
CCCCHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GLALTALLFCFAVIAQSIQWLVDTWQQNQWIYFVFSLVTCLVVLLGVSSLGKEWLRLVKL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKRLSLQQKSQQILRESAVNLGQDFCAEKHQQIKALCTEMAQMLKLSSEDPGLIQWQNQL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
HDAYSAQEVAHLFSQTVLHPFDVQIKKLISKSALEAAVIVAVSPLAVIDMFFLSWRNIRL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNQIAQIYGIELGYWSRLRLLKMVLLNLAFAGATEVVQDIGLDWLSQDLTAKLSARAAQG
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHC
IGVGLLTARLGIKAMEFCRPLAFQAGEKPRLNHIQQELLGQLRSTFFRSNKTKVKQQV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCH
>Mature Secondary Structure
MNEKRLFTEAQTENEAVDFTPKREFHGEMHIEKDEPVIEDRFVEQTFEHIVQPRSRWWKT
CCCCHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GLALTALLFCFAVIAQSIQWLVDTWQQNQWIYFVFSLVTCLVVLLGVSSLGKEWLRLVKL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKRLSLQQKSQQILRESAVNLGQDFCAEKHQQIKALCTEMAQMLKLSSEDPGLIQWQNQL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
HDAYSAQEVAHLFSQTVLHPFDVQIKKLISKSALEAAVIVAVSPLAVIDMFFLSWRNIRL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNQIAQIYGIELGYWSRLRLLKMVLLNLAFAGATEVVQDIGLDWLSQDLTAKLSARAAQG
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHC
IGVGLLTARLGIKAMEFCRPLAFQAGEKPRLNHIQQELLGQLRSTFFRSNKTKVKQQV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11248100