| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is ycjX [C]
Identifier: 15602775
GI number: 15602775
Start: 1068625
End: 1070031
Strand: Reverse
Name: ycjX [C]
Synonym: PM0910
Alternate gene names: 15602775
Gene position: 1070031-1068625 (Counterclockwise)
Preceding gene: 15602781
Following gene: 15602774
Centisome position: 47.4
GC content: 41.51
Gene sequence:
>1407_bases ATGTTAAATTATGTACAAAAAGAAGTCAGTGAAATCATTAATCGTGGTTTAGATCGTCGTTTACGGTTGGCTGTGACAGG GCTGAGCCGTAGTGGAAAGACCGCATTTATTACCAGTTTTATCAATCAGTTACTGCACATTAATCGTGTCGATAATCAAC ACATTCCGTTGTTTGAACCCGCACGCCATCATGCCATCATTGCCGTGAAACGGGTGCCTCAAGTGAACCTAAATATTCCT CGTTTTGATTATGAACAGAATGTAAAAGGATTGATGCAAGATCCACCTGTTTGGCCTCATTCTACACGTGGAGTGAGTGA AACACGATTAGCTATTCGTTATCAACGGAATACGGGATTATGGCGACATATCAAAGAAAAAGGTACGCTTTATCTCGATA TTTTTGATTATCCAGGAGAATGGTTATTAGATTTGCCTTTGCTGAGCCTAAACTATCAGCAGTGGTCAGTAGAAATGCAA CGGATCACGCAAAACCAACGTACGGATCTCGCAAAAGATTGGTTAGCTGCGGTGAATCGTTTAGATCTCAGTGCGAGTGC AGACGAAGATGTGTTGGCACAATTGGCAAAAACATATACTGATTATTTACTTGCTTGTAAACAAGAAGGGCTCCATTTTA TTCAACCGGGTCGTTTTGTATTGCCTGGTGAATTAGAGGGGGCTCCGGCATTACAGTTTTTTCCATTGTTGCATCTCTCA GCCGCAGATTGGCAGAAATTAATGCAAGAGAAAAAACAAGGTAGCTATTTTGCCGTGTTGACACAACGTTATGAGTACTA TCGCCAGCATATTGTGAAAGCCTTTTATCGTGATTATTTTTCGACTTTTGACCGGCAAGTTATCTTAGCGGATTGTTTGA CGCCGTTAAATCATAGTCAGCAAGCCTTTTTAGATATGCAAGAGGCATTACAGCAGTTATTTAAAAATTTTCATTATGGT CAGCGGACGTTATTAAATCGTTTATTTTCTCCTCGTATTGATAAACTCATGTTTATTGCTACCAAAGCAGATCACATAAC AAGCGATCAGTTGCCCAACTTGGTGAGCTTGATGCGTCAACTTGTCCAAGAAGGAGGGCGTTATGTGGAATATGAAGGTA TTACCACCGATTACACCGCCATTGCAGCGATTCGAGCCACAGAACAAGTGACCGTGAATCAACATGGGCAAAGTTTTAAA GCATTACGCGGCGTGCGTTCAAGAGATAGGCAGCGTGTGACTTTATATCCGGGAACTGTGCCGAGTAAGTTACCGCAAGC CAGTTTTTGGCAACATCAGCCATTTGAATTTGATCAATTTGAGCCGCAGTTATTAGCCTCGGGCGAAAACATACCGCATT TACGTATGGATTCGGTATTACAGTTTCTGTTAGGTGATAAGTTTTAG
Upstream 100 bases:
>100_bases GGCTTACGACTGATCTTGAATAAATCCGATTAAGAAAAAATTCAGGTTTTTTTATTATCTTGGATTTACATATAGCGAAC CGGAAGAAAAGAAACGTAGT
Downstream 100 bases:
>100_bases TGAGGTAGAGTATACATATGAATGAAAAACGTCTTTTTACTGAAGCACAGACGGAAAATGAGGCTGTGGATTTTACCCCT AAACGCGAATTTCATGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MLNYVQKEVSEIINRGLDRRLRLAVTGLSRSGKTAFITSFINQLLHINRVDNQHIPLFEPARHHAIIAVKRVPQVNLNIP RFDYEQNVKGLMQDPPVWPHSTRGVSETRLAIRYQRNTGLWRHIKEKGTLYLDIFDYPGEWLLDLPLLSLNYQQWSVEMQ RITQNQRTDLAKDWLAAVNRLDLSASADEDVLAQLAKTYTDYLLACKQEGLHFIQPGRFVLPGELEGAPALQFFPLLHLS AADWQKLMQEKKQGSYFAVLTQRYEYYRQHIVKAFYRDYFSTFDRQVILADCLTPLNHSQQAFLDMQEALQQLFKNFHYG QRTLLNRLFSPRIDKLMFIATKADHITSDQLPNLVSLMRQLVQEGGRYVEYEGITTDYTAIAAIRATEQVTVNQHGQSFK ALRGVRSRDRQRVTLYPGTVPSKLPQASFWQHQPFEFDQFEPQLLASGENIPHLRMDSVLQFLLGDKF
Sequences:
>Translated_468_residues MLNYVQKEVSEIINRGLDRRLRLAVTGLSRSGKTAFITSFINQLLHINRVDNQHIPLFEPARHHAIIAVKRVPQVNLNIP RFDYEQNVKGLMQDPPVWPHSTRGVSETRLAIRYQRNTGLWRHIKEKGTLYLDIFDYPGEWLLDLPLLSLNYQQWSVEMQ RITQNQRTDLAKDWLAAVNRLDLSASADEDVLAQLAKTYTDYLLACKQEGLHFIQPGRFVLPGELEGAPALQFFPLLHLS AADWQKLMQEKKQGSYFAVLTQRYEYYRQHIVKAFYRDYFSTFDRQVILADCLTPLNHSQQAFLDMQEALQQLFKNFHYG QRTLLNRLFSPRIDKLMFIATKADHITSDQLPNLVSLMRQLVQEGGRYVEYEGITTDYTAIAAIRATEQVTVNQHGQSFK ALRGVRSRDRQRVTLYPGTVPSKLPQASFWQHQPFEFDQFEPQLLASGENIPHLRMDSVLQFLLGDKF >Mature_468_residues MLNYVQKEVSEIINRGLDRRLRLAVTGLSRSGKTAFITSFINQLLHINRVDNQHIPLFEPARHHAIIAVKRVPQVNLNIP RFDYEQNVKGLMQDPPVWPHSTRGVSETRLAIRYQRNTGLWRHIKEKGTLYLDIFDYPGEWLLDLPLLSLNYQQWSVEMQ RITQNQRTDLAKDWLAAVNRLDLSASADEDVLAQLAKTYTDYLLACKQEGLHFIQPGRFVLPGELEGAPALQFFPLLHLS AADWQKLMQEKKQGSYFAVLTQRYEYYRQHIVKAFYRDYFSTFDRQVILADCLTPLNHSQQAFLDMQEALQQLFKNFHYG QRTLLNRLFSPRIDKLMFIATKADHITSDQLPNLVSLMRQLVQEGGRYVEYEGITTDYTAIAAIRATEQVTVNQHGQSFK ALRGVRSRDRQRVTLYPGTVPSKLPQASFWQHQPFEFDQFEPQLLASGENIPHLRMDSVLQFLLGDKF
Specific function: Unknown
COG id: COG3106
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli ycjX [H]
Homologues:
Organism=Escherichia coli, GI1787581, Length=467, Percent_Identity=49.678800856531, Blast_Score=487, Evalue=1e-139,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007413 [H]
Pfam domain/function: PF04317 DUF463 [H]
EC number: NA
Molecular weight: Translated: 54366; Mature: 54366
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNYVQKEVSEIINRGLDRRLRLAVTGLSRSGKTAFITSFINQLLHINRVDNQHIPLFEP CCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC ARHHAIIAVKRVPQVNLNIPRFDYEQNVKGLMQDPPVWPHSTRGVSETRLAIRYQRNTGL CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHEEEEEEECCCCH WRHIKEKGTLYLDIFDYPGEWLLDLPLLSLNYQQWSVEMQRITQNQRTDLAKDWLAAVNR HHHHHHCCCEEEEEECCCCCEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDLSASADEDVLAQLAKTYTDYLLACKQEGLHFIQPGRFVLPGELEGAPALQFFPLLHLS CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEECCCCCCCCCCHHHHHHHHCC AADWQKLMQEKKQGSYFAVLTQRYEYYRQHIVKAFYRDYFSTFDRQVILADCLTPLNHSQ HHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCH QAFLDMQEALQQLFKNFHYGQRTLLNRLFSPRIDKLMFIATKADHITSDQLPNLVSLMRQ HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHEEEEEECCCCCCHHCCHHHHHHHHH LVQEGGRYVEYEGITTDYTAIAAIRATEQVTVNQHGQSFKALRGVRSRDRQRVTLYPGTV HHHCCCCEEEECCCCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCEEEECCCCC PSKLPQASFWQHQPFEFDQFEPQLLASGENIPHLRMDSVLQFLLGDKF CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MLNYVQKEVSEIINRGLDRRLRLAVTGLSRSGKTAFITSFINQLLHINRVDNQHIPLFEP CCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC ARHHAIIAVKRVPQVNLNIPRFDYEQNVKGLMQDPPVWPHSTRGVSETRLAIRYQRNTGL CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHEEEEEEECCCCH WRHIKEKGTLYLDIFDYPGEWLLDLPLLSLNYQQWSVEMQRITQNQRTDLAKDWLAAVNR HHHHHHCCCEEEEEECCCCCEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDLSASADEDVLAQLAKTYTDYLLACKQEGLHFIQPGRFVLPGELEGAPALQFFPLLHLS CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEECCCCCCCCCCHHHHHHHHCC AADWQKLMQEKKQGSYFAVLTQRYEYYRQHIVKAFYRDYFSTFDRQVILADCLTPLNHSQ HHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCH QAFLDMQEALQQLFKNFHYGQRTLLNRLFSPRIDKLMFIATKADHITSDQLPNLVSLMRQ HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHEEEEEECCCCCCHHCCHHHHHHHHH LVQEGGRYVEYEGITTDYTAIAAIRATEQVTVNQHGQSFKALRGVRSRDRQRVTLYPGTV HHHCCCCEEEECCCCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCEEEECCCCC PSKLPQASFWQHQPFEFDQFEPQLLASGENIPHLRMDSVLQFLLGDKF CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]