Definition Pasteurella multocida subsp. multocida str. Pm70, complete genome.
Accession NC_002663
Length 2,257,487

Click here to switch to the map view.

The map label for this gene is ycjX [C]

Identifier: 15602775

GI number: 15602775

Start: 1068625

End: 1070031

Strand: Reverse

Name: ycjX [C]

Synonym: PM0910

Alternate gene names: 15602775

Gene position: 1070031-1068625 (Counterclockwise)

Preceding gene: 15602781

Following gene: 15602774

Centisome position: 47.4

GC content: 41.51

Gene sequence:

>1407_bases
ATGTTAAATTATGTACAAAAAGAAGTCAGTGAAATCATTAATCGTGGTTTAGATCGTCGTTTACGGTTGGCTGTGACAGG
GCTGAGCCGTAGTGGAAAGACCGCATTTATTACCAGTTTTATCAATCAGTTACTGCACATTAATCGTGTCGATAATCAAC
ACATTCCGTTGTTTGAACCCGCACGCCATCATGCCATCATTGCCGTGAAACGGGTGCCTCAAGTGAACCTAAATATTCCT
CGTTTTGATTATGAACAGAATGTAAAAGGATTGATGCAAGATCCACCTGTTTGGCCTCATTCTACACGTGGAGTGAGTGA
AACACGATTAGCTATTCGTTATCAACGGAATACGGGATTATGGCGACATATCAAAGAAAAAGGTACGCTTTATCTCGATA
TTTTTGATTATCCAGGAGAATGGTTATTAGATTTGCCTTTGCTGAGCCTAAACTATCAGCAGTGGTCAGTAGAAATGCAA
CGGATCACGCAAAACCAACGTACGGATCTCGCAAAAGATTGGTTAGCTGCGGTGAATCGTTTAGATCTCAGTGCGAGTGC
AGACGAAGATGTGTTGGCACAATTGGCAAAAACATATACTGATTATTTACTTGCTTGTAAACAAGAAGGGCTCCATTTTA
TTCAACCGGGTCGTTTTGTATTGCCTGGTGAATTAGAGGGGGCTCCGGCATTACAGTTTTTTCCATTGTTGCATCTCTCA
GCCGCAGATTGGCAGAAATTAATGCAAGAGAAAAAACAAGGTAGCTATTTTGCCGTGTTGACACAACGTTATGAGTACTA
TCGCCAGCATATTGTGAAAGCCTTTTATCGTGATTATTTTTCGACTTTTGACCGGCAAGTTATCTTAGCGGATTGTTTGA
CGCCGTTAAATCATAGTCAGCAAGCCTTTTTAGATATGCAAGAGGCATTACAGCAGTTATTTAAAAATTTTCATTATGGT
CAGCGGACGTTATTAAATCGTTTATTTTCTCCTCGTATTGATAAACTCATGTTTATTGCTACCAAAGCAGATCACATAAC
AAGCGATCAGTTGCCCAACTTGGTGAGCTTGATGCGTCAACTTGTCCAAGAAGGAGGGCGTTATGTGGAATATGAAGGTA
TTACCACCGATTACACCGCCATTGCAGCGATTCGAGCCACAGAACAAGTGACCGTGAATCAACATGGGCAAAGTTTTAAA
GCATTACGCGGCGTGCGTTCAAGAGATAGGCAGCGTGTGACTTTATATCCGGGAACTGTGCCGAGTAAGTTACCGCAAGC
CAGTTTTTGGCAACATCAGCCATTTGAATTTGATCAATTTGAGCCGCAGTTATTAGCCTCGGGCGAAAACATACCGCATT
TACGTATGGATTCGGTATTACAGTTTCTGTTAGGTGATAAGTTTTAG

Upstream 100 bases:

>100_bases
GGCTTACGACTGATCTTGAATAAATCCGATTAAGAAAAAATTCAGGTTTTTTTATTATCTTGGATTTACATATAGCGAAC
CGGAAGAAAAGAAACGTAGT

Downstream 100 bases:

>100_bases
TGAGGTAGAGTATACATATGAATGAAAAACGTCTTTTTACTGAAGCACAGACGGAAAATGAGGCTGTGGATTTTACCCCT
AAACGCGAATTTCATGGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MLNYVQKEVSEIINRGLDRRLRLAVTGLSRSGKTAFITSFINQLLHINRVDNQHIPLFEPARHHAIIAVKRVPQVNLNIP
RFDYEQNVKGLMQDPPVWPHSTRGVSETRLAIRYQRNTGLWRHIKEKGTLYLDIFDYPGEWLLDLPLLSLNYQQWSVEMQ
RITQNQRTDLAKDWLAAVNRLDLSASADEDVLAQLAKTYTDYLLACKQEGLHFIQPGRFVLPGELEGAPALQFFPLLHLS
AADWQKLMQEKKQGSYFAVLTQRYEYYRQHIVKAFYRDYFSTFDRQVILADCLTPLNHSQQAFLDMQEALQQLFKNFHYG
QRTLLNRLFSPRIDKLMFIATKADHITSDQLPNLVSLMRQLVQEGGRYVEYEGITTDYTAIAAIRATEQVTVNQHGQSFK
ALRGVRSRDRQRVTLYPGTVPSKLPQASFWQHQPFEFDQFEPQLLASGENIPHLRMDSVLQFLLGDKF

Sequences:

>Translated_468_residues
MLNYVQKEVSEIINRGLDRRLRLAVTGLSRSGKTAFITSFINQLLHINRVDNQHIPLFEPARHHAIIAVKRVPQVNLNIP
RFDYEQNVKGLMQDPPVWPHSTRGVSETRLAIRYQRNTGLWRHIKEKGTLYLDIFDYPGEWLLDLPLLSLNYQQWSVEMQ
RITQNQRTDLAKDWLAAVNRLDLSASADEDVLAQLAKTYTDYLLACKQEGLHFIQPGRFVLPGELEGAPALQFFPLLHLS
AADWQKLMQEKKQGSYFAVLTQRYEYYRQHIVKAFYRDYFSTFDRQVILADCLTPLNHSQQAFLDMQEALQQLFKNFHYG
QRTLLNRLFSPRIDKLMFIATKADHITSDQLPNLVSLMRQLVQEGGRYVEYEGITTDYTAIAAIRATEQVTVNQHGQSFK
ALRGVRSRDRQRVTLYPGTVPSKLPQASFWQHQPFEFDQFEPQLLASGENIPHLRMDSVLQFLLGDKF
>Mature_468_residues
MLNYVQKEVSEIINRGLDRRLRLAVTGLSRSGKTAFITSFINQLLHINRVDNQHIPLFEPARHHAIIAVKRVPQVNLNIP
RFDYEQNVKGLMQDPPVWPHSTRGVSETRLAIRYQRNTGLWRHIKEKGTLYLDIFDYPGEWLLDLPLLSLNYQQWSVEMQ
RITQNQRTDLAKDWLAAVNRLDLSASADEDVLAQLAKTYTDYLLACKQEGLHFIQPGRFVLPGELEGAPALQFFPLLHLS
AADWQKLMQEKKQGSYFAVLTQRYEYYRQHIVKAFYRDYFSTFDRQVILADCLTPLNHSQQAFLDMQEALQQLFKNFHYG
QRTLLNRLFSPRIDKLMFIATKADHITSDQLPNLVSLMRQLVQEGGRYVEYEGITTDYTAIAAIRATEQVTVNQHGQSFK
ALRGVRSRDRQRVTLYPGTVPSKLPQASFWQHQPFEFDQFEPQLLASGENIPHLRMDSVLQFLLGDKF

Specific function: Unknown

COG id: COG3106

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycjX [H]

Homologues:

Organism=Escherichia coli, GI1787581, Length=467, Percent_Identity=49.678800856531, Blast_Score=487, Evalue=1e-139,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007413 [H]

Pfam domain/function: PF04317 DUF463 [H]

EC number: NA

Molecular weight: Translated: 54366; Mature: 54366

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNYVQKEVSEIINRGLDRRLRLAVTGLSRSGKTAFITSFINQLLHINRVDNQHIPLFEP
CCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
ARHHAIIAVKRVPQVNLNIPRFDYEQNVKGLMQDPPVWPHSTRGVSETRLAIRYQRNTGL
CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHEEEEEEECCCCH
WRHIKEKGTLYLDIFDYPGEWLLDLPLLSLNYQQWSVEMQRITQNQRTDLAKDWLAAVNR
HHHHHHCCCEEEEEECCCCCEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDLSASADEDVLAQLAKTYTDYLLACKQEGLHFIQPGRFVLPGELEGAPALQFFPLLHLS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEECCCCCCCCCCHHHHHHHHCC
AADWQKLMQEKKQGSYFAVLTQRYEYYRQHIVKAFYRDYFSTFDRQVILADCLTPLNHSQ
HHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCH
QAFLDMQEALQQLFKNFHYGQRTLLNRLFSPRIDKLMFIATKADHITSDQLPNLVSLMRQ
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHEEEEEECCCCCCHHCCHHHHHHHHH
LVQEGGRYVEYEGITTDYTAIAAIRATEQVTVNQHGQSFKALRGVRSRDRQRVTLYPGTV
HHHCCCCEEEECCCCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCEEEECCCCC
PSKLPQASFWQHQPFEFDQFEPQLLASGENIPHLRMDSVLQFLLGDKF
CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MLNYVQKEVSEIINRGLDRRLRLAVTGLSRSGKTAFITSFINQLLHINRVDNQHIPLFEP
CCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
ARHHAIIAVKRVPQVNLNIPRFDYEQNVKGLMQDPPVWPHSTRGVSETRLAIRYQRNTGL
CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHEEEEEEECCCCH
WRHIKEKGTLYLDIFDYPGEWLLDLPLLSLNYQQWSVEMQRITQNQRTDLAKDWLAAVNR
HHHHHHCCCEEEEEECCCCCEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDLSASADEDVLAQLAKTYTDYLLACKQEGLHFIQPGRFVLPGELEGAPALQFFPLLHLS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEECCCCCCCCCCHHHHHHHHCC
AADWQKLMQEKKQGSYFAVLTQRYEYYRQHIVKAFYRDYFSTFDRQVILADCLTPLNHSQ
HHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCH
QAFLDMQEALQQLFKNFHYGQRTLLNRLFSPRIDKLMFIATKADHITSDQLPNLVSLMRQ
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHEEEEEECCCCCCHHCCHHHHHHHHH
LVQEGGRYVEYEGITTDYTAIAAIRATEQVTVNQHGQSFKALRGVRSRDRQRVTLYPGTV
HHHCCCCEEEECCCCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCEEEECCCCC
PSKLPQASFWQHQPFEFDQFEPQLLASGENIPHLRMDSVLQFLLGDKF
CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]