| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is hflX [H]
Identifier: 15602772
GI number: 15602772
Start: 1065096
End: 1066442
Strand: Direct
Name: hflX [H]
Synonym: PM0907
Alternate gene names: 15602772
Gene position: 1065096-1066442 (Clockwise)
Preceding gene: 15602771
Following gene: 15602776
Centisome position: 47.18
GC content: 41.2
Gene sequence:
>1347_bases TTGAACACATTTATTGCAAGTGCGGTAGATCTTCAGAATGAATCGACCGCACTTTCTTCATTACCTTCACCACATTCTGA ATCCCTTTTTGATCGTGCGATCATTGTTCATTGTTTCTTAGCGCAAGATCGCAATAACGATGACTTGTTAGAATTCAAAT TATTAGCCAAGTCCGCCAACGTTGACATTCTCTCTGTTATCACCAGCACTCGTCATACACCCCAAGCTAAATATTTCGTT GGGCAAGGCAAAGCGGAAGAAATCGCAGAAGCGGTGCAAAATACGCAAGCCGATGTCGTCTTAGTCAACCACGCACTCAC CCCTGCACAAACACGTAATTTAGAAAGCCTTTGTCAATGTCGCGTTGTAGATCGCACTGGAGTGATTCTCGATATTTTTG CCCAAAGAGCACGCTCACATGAAGGTAAATTACAAGTTGAATTAGCGCAACTAAAACACTTATCAACTCGTCTTGTTCGC CGAAAAACAGGGCTTGATCAACAAAAAGGAGCGGTAGGACTACGCGGACCGGGTGAAACACAGTTAGAAACTGATCGTCG TTTAATTAAAGTGCGCATTTCTCAGCTTCAAAGCCGTTTGGCAAAAGTGGAAAAGCAACGCCATCAGAATCGCCAAACAA GACAAAAAGCAGATATCCCGACGATTTCCTTAGTTGGTTATACTAATGCGGGAAAATCCACCTTGTTTAATTTAATCACC CAAGCCAATGTGTACGCAGCCGATCAGCTGTTTGCGACGCTCGACCCCACCCTACGCCGTCTGCAAATTCAAGATGTCGG GACCACGATTTTAGCGGATACAGTAGGCTTTATTCGCCATTTACCTCATGATTTAGTTTCTGCTTTCAAATCAACATTAC AAGAAACTACGGAAGCTGCCCTTTTATTACATGTTATTGATTGTGCAGATCCGCGTAAATTAGAGAATATTCACGCAGTT GAAGCCGTGTTAAAAGAAATTAATGCAGGTGATATTCCAACCTTATTAGTATATAACAAGATCGATCAAGTAGCTCATAT CGAACCACATATTGAATATGATCAAGAACAGCGCCCTATCGCAGTTTACATGTCCGCACAAACAGGCATCGGACTGCATT TATTATTGGATGCCATCAGTCTATGTTTAAAAAATGAAATTTTGGATTTAGCGCTTACTTTGCCAGTACATACGGGTAAA ATACGCCATGCCTTATACCAACAGGACTGTATTCAGCATGAACAGATTAACGAACAAGGTGAATTCTTATTAGCGATTCG TATTGATAAAGTCGCATGGCTAAAATTATTGAAACAATTTCCAGAACTCGAGACTTTTATATGTTAA
Upstream 100 bases:
>100_bases TCAGTGTCTCATCACAATAATAGCAATAATTCCAATCAACAGAATTATCAACAAGAGCAACAAACTGACAGCAACGTAGA AAAAGCAGAATAGTTTCAAG
Downstream 100 bases:
>100_bases ACGTGGCTAAAAACAAAAAAGGACAAATTCACTTTTGTCCTTTTTTGTTTACTTATTAATACCGTATTGCCGCAACTTAT TCGCGATTGCAGTATGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MNTFIASAVDLQNESTALSSLPSPHSESLFDRAIIVHCFLAQDRNNDDLLEFKLLAKSANVDILSVITSTRHTPQAKYFV GQGKAEEIAEAVQNTQADVVLVNHALTPAQTRNLESLCQCRVVDRTGVILDIFAQRARSHEGKLQVELAQLKHLSTRLVR RKTGLDQQKGAVGLRGPGETQLETDRRLIKVRISQLQSRLAKVEKQRHQNRQTRQKADIPTISLVGYTNAGKSTLFNLIT QANVYAADQLFATLDPTLRRLQIQDVGTTILADTVGFIRHLPHDLVSAFKSTLQETTEAALLLHVIDCADPRKLENIHAV EAVLKEINAGDIPTLLVYNKIDQVAHIEPHIEYDQEQRPIAVYMSAQTGIGLHLLLDAISLCLKNEILDLALTLPVHTGK IRHALYQQDCIQHEQINEQGEFLLAIRIDKVAWLKLLKQFPELETFIC
Sequences:
>Translated_448_residues MNTFIASAVDLQNESTALSSLPSPHSESLFDRAIIVHCFLAQDRNNDDLLEFKLLAKSANVDILSVITSTRHTPQAKYFV GQGKAEEIAEAVQNTQADVVLVNHALTPAQTRNLESLCQCRVVDRTGVILDIFAQRARSHEGKLQVELAQLKHLSTRLVR RKTGLDQQKGAVGLRGPGETQLETDRRLIKVRISQLQSRLAKVEKQRHQNRQTRQKADIPTISLVGYTNAGKSTLFNLIT QANVYAADQLFATLDPTLRRLQIQDVGTTILADTVGFIRHLPHDLVSAFKSTLQETTEAALLLHVIDCADPRKLENIHAV EAVLKEINAGDIPTLLVYNKIDQVAHIEPHIEYDQEQRPIAVYMSAQTGIGLHLLLDAISLCLKNEILDLALTLPVHTGK IRHALYQQDCIQHEQINEQGEFLLAIRIDKVAWLKLLKQFPELETFIC >Mature_448_residues MNTFIASAVDLQNESTALSSLPSPHSESLFDRAIIVHCFLAQDRNNDDLLEFKLLAKSANVDILSVITSTRHTPQAKYFV GQGKAEEIAEAVQNTQADVVLVNHALTPAQTRNLESLCQCRVVDRTGVILDIFAQRARSHEGKLQVELAQLKHLSTRLVR RKTGLDQQKGAVGLRGPGETQLETDRRLIKVRISQLQSRLAKVEKQRHQNRQTRQKADIPTISLVGYTNAGKSTLFNLIT QANVYAADQLFATLDPTLRRLQIQDVGTTILADTVGFIRHLPHDLVSAFKSTLQETTEAALLLHVIDCADPRKLENIHAV EAVLKEINAGDIPTLLVYNKIDQVAHIEPHIEYDQEQRPIAVYMSAQTGIGLHLLLDAISLCLKNEILDLALTLPVHTGK IRHALYQQDCIQHEQINEQGEFLLAIRIDKVAWLKLLKQFPELETFIC
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310124269, Length=279, Percent_Identity=32.9749103942652, Blast_Score=117, Evalue=3e-26, Organism=Homo sapiens, GI310124267, Length=279, Percent_Identity=32.9749103942652, Blast_Score=117, Evalue=3e-26, Organism=Homo sapiens, GI310124171, Length=279, Percent_Identity=32.9749103942652, Blast_Score=117, Evalue=3e-26, Organism=Homo sapiens, GI310124169, Length=279, Percent_Identity=32.9749103942652, Blast_Score=117, Evalue=3e-26, Organism=Homo sapiens, GI310133118, Length=285, Percent_Identity=32.280701754386, Blast_Score=114, Evalue=3e-25, Organism=Homo sapiens, GI310133116, Length=285, Percent_Identity=32.280701754386, Blast_Score=113, Evalue=3e-25, Organism=Escherichia coli, GI1790615, Length=425, Percent_Identity=61.6470588235294, Blast_Score=526, Evalue=1e-150, Organism=Caenorhabditis elegans, GI17561038, Length=323, Percent_Identity=26.625386996904, Blast_Score=111, Evalue=7e-25, Organism=Drosophila melanogaster, GI24650079, Length=353, Percent_Identity=29.4617563739377, Blast_Score=102, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 50105; Mature: 50105
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTFIASAVDLQNESTALSSLPSPHSESLFDRAIIVHCFLAQDRNNDDLLEFKLLAKSAN CCCHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC VDILSVITSTRHTPQAKYFVGQGKAEEIAEAVQNTQADVVLVNHALTPAQTRNLESLCQC CHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCHHHCCHHHHHHE RVVDRTGVILDIFAQRARSHEGKLQVELAQLKHLSTRLVRRKTGLDQQKGAVGLRGPGET EECCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCC QLETDRRLIKVRISQLQSRLAKVEKQRHQNRQTRQKADIPTISLVGYTNAGKSTLFNLIT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHH QANVYAADQLFATLDPTLRRLQIQDVGTTILADTVGFIRHLPHDLVSAFKSTLQETTEAA HCCHHHHHHHHHHHCHHHHHEEHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LLLHVIDCADPRKLENIHAVEAVLKEINAGDIPTLLVYNKIDQVAHIEPHIEYDQEQRPI HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCE AVYMSAQTGIGLHLLLDAISLCLKNEILDLALTLPVHTGKIRHALYQQDCIQHEQINEQG EEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHCCCCC EFLLAIRIDKVAWLKLLKQFPELETFIC CEEEEEEEHHHHHHHHHHHCCCHHHHCC >Mature Secondary Structure MNTFIASAVDLQNESTALSSLPSPHSESLFDRAIIVHCFLAQDRNNDDLLEFKLLAKSAN CCCHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC VDILSVITSTRHTPQAKYFVGQGKAEEIAEAVQNTQADVVLVNHALTPAQTRNLESLCQC CHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCHHHCCHHHHHHE RVVDRTGVILDIFAQRARSHEGKLQVELAQLKHLSTRLVRRKTGLDQQKGAVGLRGPGET EECCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCC QLETDRRLIKVRISQLQSRLAKVEKQRHQNRQTRQKADIPTISLVGYTNAGKSTLFNLIT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHH QANVYAADQLFATLDPTLRRLQIQDVGTTILADTVGFIRHLPHDLVSAFKSTLQETTEAA HCCHHHHHHHHHHHCHHHHHEEHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LLLHVIDCADPRKLENIHAVEAVLKEINAGDIPTLLVYNKIDQVAHIEPHIEYDQEQRPI HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCE AVYMSAQTGIGLHLLLDAISLCLKNEILDLALTLPVHTGKIRHALYQQDCIQHEQINEQG EEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHCCCCC EFLLAIRIDKVAWLKLLKQFPELETFIC CEEEEEEEHHHHHHHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]