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The map label for this gene is nlpC [C]

Identifier: 15602492

GI number: 15602492

Start: 729782

End: 730261

Strand: Reverse

Name: nlpC [C]

Synonym: PM0627

Alternate gene names: 15602492

Gene position: 730261-729782 (Counterclockwise)

Preceding gene: 15602493

Following gene: 15602490

Centisome position: 32.35

GC content: 38.33

Gene sequence:

>480_bases
ATGTTATTAAAGCAATGTGTATTCGTAAGTCTGTTTTGTCTACTATCTGCCTGTGGTCATCATAGCAATACGGGGAAAAT
CAGTTATAAGGGGCAACTCAATGATCCGATTATGGTGATTGCCTTATTGAGTGAGCAACAACGTGAGTGGGCAGGAACGC
CCTATCGTTTAGGTGGACAAAGTCGTGCCGGTATTGATTGCTCTGGTTTTGTACAAAAAACGTTTTTAGATCGCTTTGAT
ATTCTTTTACCGAGAATGACGGTACAGCAAGCTAATTATGGAAAATTAGTGTCTAAACAAGATATCCAAACTGGTGATTT
AGTGTTTTTTAAAACCGGTCGAGGTCCAAATGGCTATCATGTTGGTATTTATGTCAAAGATGATTTGTTTTTGCATGCCT
CAACCAAAGGAGGGGTAATCTATTCTTCTTTAAATAGCCCCTATTGGTCAAAAAAATATTGGCAAGCAAGACGCATTTAA

Upstream 100 bases:

>100_bases
CCAAAGAGTTAATTTTCGCTTTTGAAGTACGCTTTCAAATCGTTAAGCTATCTGTAGGCTAACTATGGATAGCTTTCCTT
TTGGTAGAAAAAATATGAAG

Downstream 100 bases:

>100_bases
TACGGTGATTGGCGAAAGATTATAATTCGCCAAGTAAATCATCAATCGCTTGTGATAACAAACTTCGATCATGGCGATAG
CTAATATCATCTGCCTGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MLLKQCVFVSLFCLLSACGHHSNTGKISYKGQLNDPIMVIALLSEQQREWAGTPYRLGGQSRAGIDCSGFVQKTFLDRFD
ILLPRMTVQQANYGKLVSKQDIQTGDLVFFKTGRGPNGYHVGIYVKDDLFLHASTKGGVIYSSLNSPYWSKKYWQARRI

Sequences:

>Translated_159_residues
MLLKQCVFVSLFCLLSACGHHSNTGKISYKGQLNDPIMVIALLSEQQREWAGTPYRLGGQSRAGIDCSGFVQKTFLDRFD
ILLPRMTVQQANYGKLVSKQDIQTGDLVFFKTGRGPNGYHVGIYVKDDLFLHASTKGGVIYSSLNSPYWSKKYWQARRI
>Mature_159_residues
MLLKQCVFVSLFCLLSACGHHSNTGKISYKGQLNDPIMVIALLSEQQREWAGTPYRLGGQSRAGIDCSGFVQKTFLDRFD
ILLPRMTVQQANYGKLVSKQDIQTGDLVFFKTGRGPNGYHVGIYVKDDLFLHASTKGGVIYSSLNSPYWSKKYWQARRI

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1788001, Length=157, Percent_Identity=50.9554140127389, Blast_Score=156, Evalue=5e-40,
Organism=Escherichia coli, GI1788501, Length=123, Percent_Identity=50.4065040650407, Blast_Score=137, Evalue=4e-34,
Organism=Escherichia coli, GI1787944, Length=113, Percent_Identity=38.9380530973451, Blast_Score=73, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 17902; Mature: 17902

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLKQCVFVSLFCLLSACGHHSNTGKISYKGQLNDPIMVIALLSEQQREWAGTPYRLGGQ
CCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEEECCHHHHHHCCCCEEECCC
SRAGIDCSGFVQKTFLDRFDILLPRMTVQQANYGKLVSKQDIQTGDLVFFKTGRGPNGYH
CCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEE
VGIYVKDDLFLHASTKGGVIYSSLNSPYWSKKYWQARRI
EEEEEECCEEEEECCCCCEEEECCCCCCCCCHHHHCCCC
>Mature Secondary Structure
MLLKQCVFVSLFCLLSACGHHSNTGKISYKGQLNDPIMVIALLSEQQREWAGTPYRLGGQ
CCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEEECCHHHHHHCCCCEEECCC
SRAGIDCSGFVQKTFLDRFDILLPRMTVQQANYGKLVSKQDIQTGDLVFFKTGRGPNGYH
CCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEE
VGIYVKDDLFLHASTKGGVIYSSLNSPYWSKKYWQARRI
EEEEEECCEEEEECCCCCEEEECCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]