| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is yeaD [C]
Identifier: 15602466
GI number: 15602466
Start: 698907
End: 699731
Strand: Direct
Name: yeaD [C]
Synonym: PM0601
Alternate gene names: 15602466
Gene position: 698907-699731 (Clockwise)
Preceding gene: 15602465
Following gene: 15602467
Centisome position: 30.96
GC content: 37.33
Gene sequence:
>825_bases ATGATCCAATATAAAAAGATTAAGCAAATTAGCCCTGAATTAACTTTATCTTACTATAACCAAATTCCCGTTTTAGAATT AAATCATCCTCATTTGGGAGAGGCTAAAGTTGCATTACAAGGTGCACAATTATTAAGCTGGAAACCTAAAAGTGAACAAC AAGACATATTATGGTTAAGCCCAATAGAACCTTTTTTGCTCGGGCAAGCGATTCGCGGTGGGATACCTATTTGTTACCCT TGGTTTGGTGCAACGAAAAAGCCAATACATGGGACTGCTCGTTTAGCGTTATGGAAACTGAGCCATTTTGATATTGATAT TGAACACGCTCGTATTGAGTTAGTGTTGTTAGACCAACAACATATTGTTGAAGCCAAAGTTGTGATGTTGTTTAGTGAAA AGTGCGAACTTATTTTTACGCATTATGGTAAACAAGCAGCACAAGCGGCATTCCATACTTATTTTCATGTGGGCAATATT GAGCAAGTTGAGATAATGCATTTACCAACGGTTTGTTTCAACGCAGTGACACAACAACAAGAACAGGTGCCATCTTCTCG TCGTATTACACAACATACTGATTGTATTTATACGCTAGAAGCACCAACAAATTATATTCTCGATCATCAATTTAATCGCC AAATTGAAGTCACACATCAAAATGCGACAGAAACGGTTTTATGGAATCCATGGCATAGCGTCATGAGTGCAATGCAAGAG CAAGATTATCAAAATATGCTTTGTCTTGAAACAGCTCGAATCTATCAGCTTTTGCATTTTGGTGAATCAATCCGTGTGAC CTTAGCAAGGAAAAAATCAAACTAG
Upstream 100 bases:
>100_bases TTCTTATCAATATTTTTTCCGTCAGACAGCAGAAGACATGCAACAGATGAGCAATCAGATTCGTTTTGCTAAAACATAAT AAAAAATGAAGGAGTCAATC
Downstream 100 bases:
>100_bases GGTTGTTGCATAAATACTTAAAATACAGTAGAATTTCGTTCGTTTTTGTTCTTTTAGAACAACATAGACTTTTCTTCTGC TAAGCAGATGAACGCAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Putative D-hexose-6-phosphate mutarotase [H]
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MIQYKKIKQISPELTLSYYNQIPVLELNHPHLGEAKVALQGAQLLSWKPKSEQQDILWLSPIEPFLLGQAIRGGIPICYP WFGATKKPIHGTARLALWKLSHFDIDIEHARIELVLLDQQHIVEAKVVMLFSEKCELIFTHYGKQAAQAAFHTYFHVGNI EQVEIMHLPTVCFNAVTQQQEQVPSSRRITQHTDCIYTLEAPTNYILDHQFNRQIEVTHQNATETVLWNPWHSVMSAMQE QDYQNMLCLETARIYQLLHFGESIRVTLARKKSN
Sequences:
>Translated_274_residues MIQYKKIKQISPELTLSYYNQIPVLELNHPHLGEAKVALQGAQLLSWKPKSEQQDILWLSPIEPFLLGQAIRGGIPICYP WFGATKKPIHGTARLALWKLSHFDIDIEHARIELVLLDQQHIVEAKVVMLFSEKCELIFTHYGKQAAQAAFHTYFHVGNI EQVEIMHLPTVCFNAVTQQQEQVPSSRRITQHTDCIYTLEAPTNYILDHQFNRQIEVTHQNATETVLWNPWHSVMSAMQE QDYQNMLCLETARIYQLLHFGESIRVTLARKKSN >Mature_274_residues MIQYKKIKQISPELTLSYYNQIPVLELNHPHLGEAKVALQGAQLLSWKPKSEQQDILWLSPIEPFLLGQAIRGGIPICYP WFGATKKPIHGTARLALWKLSHFDIDIEHARIELVLLDQQHIVEAKVVMLFSEKCELIFTHYGKQAAQAAFHTYFHVGNI EQVEIMHLPTVCFNAVTQQQEQVPSSRRITQHTDCIYTLEAPTNYILDHQFNRQIEVTHQNATETVLWNPWHSVMSAMQE QDYQNMLCLETARIYQLLHFGESIRVTLARKKSN
Specific function: Unknown
COG id: COG0676
COG function: function code G; Uncharacterized enzymes related to aldose 1-epimerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Glucose-6-phosphate 1-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI87081973, Length=283, Percent_Identity=33.5689045936396, Blast_Score=144, Evalue=5e-36, Organism=Saccharomyces cerevisiae, GI6323746, Length=250, Percent_Identity=28.4, Blast_Score=75, Evalue=1e-14, Organism=Drosophila melanogaster, GI19921284, Length=262, Percent_Identity=25.9541984732824, Blast_Score=84, Evalue=1e-16,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008183 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: =5.1.3.15 [H]
Molecular weight: Translated: 31707; Mature: 31707
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQYKKIKQISPELTLSYYNQIPVLELNHPHLGEAKVALQGAQLLSWKPKSEQQDILWLS CCCCHHHHHCCCCEEEEECCCCCEEEECCCCCCCCCEEEECCHHEECCCCCCCCCEEEEC PIEPFLLGQAIRGGIPICYPWFGATKKPIHGTARLALWKLSHFDIDIEHARIELVLLDQQ CCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEEEECCEEEEEEEEEEEEEECCH HIVEAKVVMLFSEKCELIFTHYGKQAAQAAFHTYFHVGNIEQVEIMHLPTVCFNAVTQQQ HHHHHHHEEEECCCCCEEEECCCHHHHHHHHHHHEECCCCCEEEEEECCHHHHHHHHHHH EQVPSSRRITQHTDCIYTLEAPTNYILDHQFNRQIEVTHQNATETVLWNPWHSVMSAMQE HHCCCCCCCEECCCEEEEEECCCCEEECCCCCCEEEEEECCCCCEEEECCHHHHHHHHHH QDYQNMLCLETARIYQLLHFGESIRVTLARKKSN HHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC >Mature Secondary Structure MIQYKKIKQISPELTLSYYNQIPVLELNHPHLGEAKVALQGAQLLSWKPKSEQQDILWLS CCCCHHHHHCCCCEEEEECCCCCEEEECCCCCCCCCEEEECCHHEECCCCCCCCCEEEEC PIEPFLLGQAIRGGIPICYPWFGATKKPIHGTARLALWKLSHFDIDIEHARIELVLLDQQ CCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEEEECCEEEEEEEEEEEEEECCH HIVEAKVVMLFSEKCELIFTHYGKQAAQAAFHTYFHVGNIEQVEIMHLPTVCFNAVTQQQ HHHHHHHEEEECCCCCEEEECCCHHHHHHHHHHHEECCCCCEEEEEECCHHHHHHHHHHH EQVPSSRRITQHTDCIYTLEAPTNYILDHQFNRQIEVTHQNATETVLWNPWHSVMSAMQE HHCCCCCCCEECCCEEEEEECCCCEEECCCCCCEEEEEECCCCCEEEECCHHHHHHHHHH QDYQNMLCLETARIYQLLHFGESIRVTLARKKSN HHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]