| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is hemR [H]
Identifier: 15602441
GI number: 15602441
Start: 662872
End: 665100
Strand: Direct
Name: hemR [H]
Synonym: PM0576
Alternate gene names: 15602441
Gene position: 662872-665100 (Clockwise)
Preceding gene: 15602433
Following gene: 15602447
Centisome position: 29.36
GC content: 32.84
Gene sequence:
>2229_bases ATGGATAAAAATTTAATGAAGGGATGTGTATTCTTATCAATAGTCGGTTGCGGTATCCAAATAGGGCTAGCATCAAATCC AAATCCTCCAGATGTGGATGAGTTATTACCTATTATTGTGAATGCTGATGAAGATAATAAATTACCAGGTCGTTCTGTAT TAAAACAGAAAAATATCGATCAACAACAAGCAGATAATGCTGCTGACTTAATAAATATTTTGCCTGGTGTAAATATGGCG GGAGGATTTCGCCCTGGTGGTCAAACATTAAATATTAATGGAATGGGTGATGCTGAAGATGTTAGAGTTCAACTAGACGG CGCAACAAAAAGTTTCGAAAAATATCAACAAGGCTCTATTTTTATTGAACCTGAGTTATTAAGAAAGGTGACAGTAGACA AAGGAAATTATTCTCCTCAATATGGCAATGGTGGCTTTGCTGGTACTGTAAAATTTGAAACAAAAGATGCAACTGATTTT TTGAAAGAAAATCAGAAAATAGGTGGATTATTTAAATATGGAAATAATAGCAATAATAACCAGAAAACTTATAGTACAGC CCTAGTTTTACAGAATGAACAAAAAAATATTGATTTGTTATTATTTGGTTCTGTAAGAAATGCAAGCAATTATACAAGAC CTGATAAAAGTAAAATTCTTTTTTCAAAAAACAATCAAAAAAGTGGATTAATAAAAGTAAATTGGCAAATTACTCCTGAA CATTTATTAACTTTATTCAGTGTTTATGGCATTCATAAAGGGTGGGAACCTTGGGCAGCAAAAAGAGATGTGATGTCGAG ACCAACAGAAACAGAAATAAAACGCTATGGGATTGATGTTGCGTGGAAACGTAAACTTGTTTATCGAGATCAAAAAGATG AAAGTTATTCATTGAAATATCGCTATTTACCTGAAAATAATAAGTGGATTAATTTATCTGTTCAGCTGAGTTATAGTAAA ACAGAACAGAATGATACTCGCCATGAGAAAGTCACTTCTTCATTCCTAGGTACATTAGGAAATAAAAGTTGGATAACTTA TTCAGATCTTACTTTTGATATAAGTAACACAAGTACTCTAAATATTGGGCGTGCTGAGCATGAACTACTATTTGGTTTAC AGTGGTTAAAAAATAAAAGAAATACCCTTATGTATCATAAAGAGGGAGTCAAGAAGGCAGACTATAATTATGGCTATTTT CAGCCTTATTATATGCCTTCTGGACGCCAGTATACACATGCATTTTATTTACAAGATCAAATAAAATGGCAGAATTTCCT CTTTACAGGAGGGATAAGATATGACCATATCAATAATATAGGGCAGAAAAATTTAGCGCCACGATATAATGATATCTCTG CAGGACATGATTATAGCCAGAAAAATTATAATGGTTGGTCTTATTATTTAGGTCTTAAGTATGATGTAAATCATTATTTA AGTTTATTTACGAATTTTAGTAAAACTTGGCGAGCACCTGTTATTGATGAACAGTATGAGACACAATATAGTCAAGCTTC TGTATCTGCGACTTCTTTGAATTTAGAAAAAGAAATGATTAATCAAACCAGAGTGGGTGGAATTATTACTCTCAATCATC TATTTCAGGAAAATGATGCTTTTCAATTTAGAACTACTTATTTTTACAATCGCGGCAAGAATGAAATCTTCAAAACGAGA GGGGTTAATTGCGTAGAAAATGCTTTAGATGTTGATAATAGTGTTTGTCCTAAAATTATTAGTAATTACCGTAATTTACC TGGTTATGTTATTCAAGGAGCGGAATTAGAAGCTTATTATCAATCATCGTATTTATTTGGTGGACTGACATATTCTTATG TAAAAGGAAAACGCGATACTTCACCAAGAAATCCATGGAGTAAAACATCTACATGGATCGCAGAAACACCACCTAGAAAA GCAACCGCTACTTTAGGTTTTAATATTCCGGAATATTATTTTACGGCAGGTTGGCGTGCTGAGTTTGTGAGAAAGCAAGA TAGATCACCACTATCTAATGATTCTAAAGCATCATATTGGGCATTACCTTCTTCAAAAGGATATAGCCTACATAGTGTAT TCTTCTCTTGGAGTCCTACAAAGATTAAAGGAATGAATTTCAAAGTTACTGTTGATAATTTATTTAACCGACCCTATTAT CCTTACTTAGGAGAATTAGCTTCAGGAACAGGTAGGAATGTCAAATTTAGCCTGACTCAGCAATTTTAA
Upstream 100 bases:
>100_bases GAAAGGCAAAAAATTGTATAGGATAACTTGTTTTTTATTGCCATTTATTTAGAATTAGAATCTTTAATAATAAAAATGAT TATCATTAAGGTTAATAGTT
Downstream 100 bases:
>100_bases AATATAGCCCGATTGAATCCAAATCGGGCTATATTTTTTTATGTGGTCGCTTGTTTCATTTTTTGCGTAAACTGCGCTAG TTCAGCTAAGCAGGCTTGTG
Product: HemR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 742; Mature: 742
Protein sequence:
>742_residues MDKNLMKGCVFLSIVGCGIQIGLASNPNPPDVDELLPIIVNADEDNKLPGRSVLKQKNIDQQQADNAADLINILPGVNMA GGFRPGGQTLNINGMGDAEDVRVQLDGATKSFEKYQQGSIFIEPELLRKVTVDKGNYSPQYGNGGFAGTVKFETKDATDF LKENQKIGGLFKYGNNSNNNQKTYSTALVLQNEQKNIDLLLFGSVRNASNYTRPDKSKILFSKNNQKSGLIKVNWQITPE HLLTLFSVYGIHKGWEPWAAKRDVMSRPTETEIKRYGIDVAWKRKLVYRDQKDESYSLKYRYLPENNKWINLSVQLSYSK TEQNDTRHEKVTSSFLGTLGNKSWITYSDLTFDISNTSTLNIGRAEHELLFGLQWLKNKRNTLMYHKEGVKKADYNYGYF QPYYMPSGRQYTHAFYLQDQIKWQNFLFTGGIRYDHINNIGQKNLAPRYNDISAGHDYSQKNYNGWSYYLGLKYDVNHYL SLFTNFSKTWRAPVIDEQYETQYSQASVSATSLNLEKEMINQTRVGGIITLNHLFQENDAFQFRTTYFYNRGKNEIFKTR GVNCVENALDVDNSVCPKIISNYRNLPGYVIQGAELEAYYQSSYLFGGLTYSYVKGKRDTSPRNPWSKTSTWIAETPPRK ATATLGFNIPEYYFTAGWRAEFVRKQDRSPLSNDSKASYWALPSSKGYSLHSVFFSWSPTKIKGMNFKVTVDNLFNRPYY PYLGELASGTGRNVKFSLTQQF
Sequences:
>Translated_742_residues MDKNLMKGCVFLSIVGCGIQIGLASNPNPPDVDELLPIIVNADEDNKLPGRSVLKQKNIDQQQADNAADLINILPGVNMA GGFRPGGQTLNINGMGDAEDVRVQLDGATKSFEKYQQGSIFIEPELLRKVTVDKGNYSPQYGNGGFAGTVKFETKDATDF LKENQKIGGLFKYGNNSNNNQKTYSTALVLQNEQKNIDLLLFGSVRNASNYTRPDKSKILFSKNNQKSGLIKVNWQITPE HLLTLFSVYGIHKGWEPWAAKRDVMSRPTETEIKRYGIDVAWKRKLVYRDQKDESYSLKYRYLPENNKWINLSVQLSYSK TEQNDTRHEKVTSSFLGTLGNKSWITYSDLTFDISNTSTLNIGRAEHELLFGLQWLKNKRNTLMYHKEGVKKADYNYGYF QPYYMPSGRQYTHAFYLQDQIKWQNFLFTGGIRYDHINNIGQKNLAPRYNDISAGHDYSQKNYNGWSYYLGLKYDVNHYL SLFTNFSKTWRAPVIDEQYETQYSQASVSATSLNLEKEMINQTRVGGIITLNHLFQENDAFQFRTTYFYNRGKNEIFKTR GVNCVENALDVDNSVCPKIISNYRNLPGYVIQGAELEAYYQSSYLFGGLTYSYVKGKRDTSPRNPWSKTSTWIAETPPRK ATATLGFNIPEYYFTAGWRAEFVRKQDRSPLSNDSKASYWALPSSKGYSLHSVFFSWSPTKIKGMNFKVTVDNLFNRPYY PYLGELASGTGRNVKFSLTQQF >Mature_742_residues MDKNLMKGCVFLSIVGCGIQIGLASNPNPPDVDELLPIIVNADEDNKLPGRSVLKQKNIDQQQADNAADLINILPGVNMA GGFRPGGQTLNINGMGDAEDVRVQLDGATKSFEKYQQGSIFIEPELLRKVTVDKGNYSPQYGNGGFAGTVKFETKDATDF LKENQKIGGLFKYGNNSNNNQKTYSTALVLQNEQKNIDLLLFGSVRNASNYTRPDKSKILFSKNNQKSGLIKVNWQITPE HLLTLFSVYGIHKGWEPWAAKRDVMSRPTETEIKRYGIDVAWKRKLVYRDQKDESYSLKYRYLPENNKWINLSVQLSYSK TEQNDTRHEKVTSSFLGTLGNKSWITYSDLTFDISNTSTLNIGRAEHELLFGLQWLKNKRNTLMYHKEGVKKADYNYGYF QPYYMPSGRQYTHAFYLQDQIKWQNFLFTGGIRYDHINNIGQKNLAPRYNDISAGHDYSQKNYNGWSYYLGLKYDVNHYL SLFTNFSKTWRAPVIDEQYETQYSQASVSATSLNLEKEMINQTRVGGIITLNHLFQENDAFQFRTTYFYNRGKNEIFKTR GVNCVENALDVDNSVCPKIISNYRNLPGYVIQGAELEAYYQSSYLFGGLTYSYVKGKRDTSPRNPWSKTSTWIAETPPRK ATATLGFNIPEYYFTAGWRAEFVRKQDRSPLSNDSKASYWALPSSKGYSLHSVFFSWSPTKIKGMNFKVTVDNLFNRPYY PYLGELASGTGRNVKFSLTQQF
Specific function: Heme receptor [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR011276 - InterPro: IPR010949 - InterPro: IPR010917 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 84911; Mature: 84911
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKNLMKGCVFLSIVGCGIQIGLASNPNPPDVDELLPIIVNADEDNKLPGRSVLKQKNID CCCHHHHHHHEEEEECCCEEEEECCCCCCCCHHHHCEEEEECCCCCCCCCHHHHHHCCCC QQQADNAADLINILPGVNMAGGFRPGGQTLNINGMGDAEDVRVQLDGATKSFEKYQQGSI HHHCCCHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCHHHHHHHHCCCE FIEPELLRKVTVDKGNYSPQYGNGGFAGTVKFETKDATDFLKENQKIGGLFKYGNNSNNN EECHHHHHEEEECCCCCCCCCCCCCEEEEEEEECCCHHHHHHCCCCCCCEEEECCCCCCC QKTYSTALVLQNEQKNIDLLLFGSVRNASNYTRPDKSKILFSKNNQKSGLIKVNWQITPE CEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECHH HLLTLFSVYGIHKGWEPWAAKRDVMSRPTETEIKRYGIDVAWKRKLVYRDQKDESYSLKY HHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCEEEEEEEEECCCCCCEEEEE RYLPENNKWINLSVQLSYSKTEQNDTRHEKVTSSFLGTLGNKSWITYSDLTFDISNTSTL EECCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECEEEEECCCCEE NIGRAEHELLFGLQWLKNKRNTLMYHKEGVKKADYNYGYFQPYYMPSGRQYTHAFYLQDQ ECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECC IKWQNFLFTGGIRYDHINNIGQKNLAPRYNDISAGHDYSQKNYNGWSYYLGLKYDVNHYL CCEEEEEEECCEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECHHHHH SLFTNFSKTWRAPVIDEQYETQYSQASVSATSLNLEKEMINQTRVGGIITLNHLFQENDA HHHHHHHHHCCCCCCCCHHHHHHHHCEEEEEEECHHHHHHHHHHCCCEEEEEHHHCCCCC FQFRTTYFYNRGKNEIFKTRGVNCVENALDVDNSVCPKIISNYRNLPGYVIQGAELEAYY EEEEEEEEEECCCCHHHHHCCCHHHHHHHCCCCCHHHHHHHHHCCCCCEEEECCEEEEEE QSSYLFGGLTYSYVKGKRDTSPRNPWSKTSTWIAETPPRKATATLGFNIPEYYFTAGWRA ECCEEECCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCHHEEECCCHH EFVRKQDRSPLSNDSKASYWALPSSKGYSLHSVFFSWSPTKIKGMNFKVTVDNLFNRPYY HHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCEEECCEEEEEHHHHHCCCCC PYLGELASGTGRNVKFSLTQQF CHHHHHHCCCCCCEEEEEECCC >Mature Secondary Structure MDKNLMKGCVFLSIVGCGIQIGLASNPNPPDVDELLPIIVNADEDNKLPGRSVLKQKNID CCCHHHHHHHEEEEECCCEEEEECCCCCCCCHHHHCEEEEECCCCCCCCCHHHHHHCCCC QQQADNAADLINILPGVNMAGGFRPGGQTLNINGMGDAEDVRVQLDGATKSFEKYQQGSI HHHCCCHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCHHHHHHHHCCCE FIEPELLRKVTVDKGNYSPQYGNGGFAGTVKFETKDATDFLKENQKIGGLFKYGNNSNNN EECHHHHHEEEECCCCCCCCCCCCCEEEEEEEECCCHHHHHHCCCCCCCEEEECCCCCCC QKTYSTALVLQNEQKNIDLLLFGSVRNASNYTRPDKSKILFSKNNQKSGLIKVNWQITPE CEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECHH HLLTLFSVYGIHKGWEPWAAKRDVMSRPTETEIKRYGIDVAWKRKLVYRDQKDESYSLKY HHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCEEEEEEEEECCCCCCEEEEE RYLPENNKWINLSVQLSYSKTEQNDTRHEKVTSSFLGTLGNKSWITYSDLTFDISNTSTL EECCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECEEEEECCCCEE NIGRAEHELLFGLQWLKNKRNTLMYHKEGVKKADYNYGYFQPYYMPSGRQYTHAFYLQDQ ECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECC IKWQNFLFTGGIRYDHINNIGQKNLAPRYNDISAGHDYSQKNYNGWSYYLGLKYDVNHYL CCEEEEEEECCEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECHHHHH SLFTNFSKTWRAPVIDEQYETQYSQASVSATSLNLEKEMINQTRVGGIITLNHLFQENDA HHHHHHHHHCCCCCCCCHHHHHHHHCEEEEEEECHHHHHHHHHHCCCEEEEEHHHCCCCC FQFRTTYFYNRGKNEIFKTRGVNCVENALDVDNSVCPKIISNYRNLPGYVIQGAELEAYY EEEEEEEEEECCCCHHHHHCCCHHHHHHHCCCCCHHHHHHHHHCCCCCEEEECCEEEEEE QSSYLFGGLTYSYVKGKRDTSPRNPWSKTSTWIAETPPRKATATLGFNIPEYYFTAGWRA ECCEEECCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCHHEEECCCHH EFVRKQDRSPLSNDSKASYWALPSSKGYSLHSVFFSWSPTKIKGMNFKVTVDNLFNRPYY HHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCEEECCEEEEEHHHHHCCCCC PYLGELASGTGRNVKFSLTQQF CHHHHHHCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA