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The map label for this gene is ychA [C]

Identifier: 15602422

GI number: 15602422

Start: 640745

End: 641539

Strand: Direct

Name: ychA [C]

Synonym: PM0557

Alternate gene names: 15602422

Gene position: 640745-641539 (Clockwise)

Preceding gene: 15602421

Following gene: 15602423

Centisome position: 28.38

GC content: 39.25

Gene sequence:

>795_bases
ATGAACTATGTGAAAAAAGCCCTATATGATGAAATGTTGAGTTTTTACCATACAACACTCGGTATGGAACATGAAGATCG
GTTACGTCTTCGTGGGCAGATAGGCCATTTAGTCCGTGTAGCAAGAAAAGAAATTCCAGATACCTTGGAAACTAAAGCGA
AAATTCATCTTCTTTTGCAGCTATTTTATGGCGAGTGGGGATTTCATTGTGATCCAGAGTCGTATTTTTTATCGTCCAAT
TTATACCTCAATGATGTTTTAGAAACACGTCGCGGTATGCCGGTGAGTCTAGGTGCAATTTTGTTATATATTGCAGATAA
GCTCAATTTACCGCTTTACCCGGTCAATTTCCCAACCCAATTAGTGATTCGTGCGGAAGTAGAAGGAGAAGTTGCCTTTA
TTAACCCATGGGATGGGCAATATATTTCGCAAGCGTTATTACATAAATGGTACGAAGGAGCGATGGGATTTGGTATGACA
TTGACACCCACTGAATTAGCGATTGCGAATGTGGGCGATTTACTAGGGCGTTTTCGTCAACTTGCCAAGAATGCGTTAAT
TCGGGAAGAAAAAAATGATGAAGCCTTTTGTTATATTGCACGTTTAATTCATTATAATCCTGAAGATCCTTATGAAATTC
GTGATAGAGGATTGGTTTTAGCGCAAATGGGCTGCTACCATGTGGCAACAGAGGATTTTCAGTATTTTATCGATCAATGC
CCTCAGGACCCAACCGCGCTTTTACTGAAAAATCAGTTAGAAGAGTTAAAACAAGATACTTATCCTATACATTAA

Upstream 100 bases:

>100_bases
TGCGGTCAATTTTTCAAAAAAATTTATGGCATAACGTTGCGACGCTAAAAGATTATAGTGGGAATGAAAGGGTAACCTTA
GGTTGTTGGAGGTGAGTAGA

Downstream 100 bases:

>100_bases
GAAGGAAAACATGATGCAAAATAAAGTGATTCGCTTAGGCGAAATTGAGATTTCTAATGATAAACCCTTTGTTTTGTTTG
GGGGAATGAACGTATTAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MNYVKKALYDEMLSFYHTTLGMEHEDRLRLRGQIGHLVRVARKEIPDTLETKAKIHLLLQLFYGEWGFHCDPESYFLSSN
LYLNDVLETRRGMPVSLGAILLYIADKLNLPLYPVNFPTQLVIRAEVEGEVAFINPWDGQYISQALLHKWYEGAMGFGMT
LTPTELAIANVGDLLGRFRQLAKNALIREEKNDEAFCYIARLIHYNPEDPYEIRDRGLVLAQMGCYHVATEDFQYFIDQC
PQDPTALLLKNQLEELKQDTYPIH

Sequences:

>Translated_264_residues
MNYVKKALYDEMLSFYHTTLGMEHEDRLRLRGQIGHLVRVARKEIPDTLETKAKIHLLLQLFYGEWGFHCDPESYFLSSN
LYLNDVLETRRGMPVSLGAILLYIADKLNLPLYPVNFPTQLVIRAEVEGEVAFINPWDGQYISQALLHKWYEGAMGFGMT
LTPTELAIANVGDLLGRFRQLAKNALIREEKNDEAFCYIARLIHYNPEDPYEIRDRGLVLAQMGCYHVATEDFQYFIDQC
PQDPTALLLKNQLEELKQDTYPIH
>Mature_264_residues
MNYVKKALYDEMLSFYHTTLGMEHEDRLRLRGQIGHLVRVARKEIPDTLETKAKIHLLLQLFYGEWGFHCDPESYFLSSN
LYLNDVLETRRGMPVSLGAILLYIADKLNLPLYPVNFPTQLVIRAEVEGEVAFINPWDGQYISQALLHKWYEGAMGFGMT
LTPTELAIANVGDLLGRFRQLAKNALIREEKNDEAFCYIARLIHYNPEDPYEIRDRGLVLAQMGCYHVATEDFQYFIDQC
PQDPTALLLKNQLEELKQDTYPIH

Specific function: Unknown

COG id: COG2912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0162 family

Homologues:

Organism=Escherichia coli, GI1787465, Length=233, Percent_Identity=39.0557939914163, Blast_Score=185, Evalue=2e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y557_PASMU (Q9CN81)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_245494.1
- GeneID:   1243904
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM0557
- NMPDR:   fig|272843.1.peg.557
- HOGENOM:   HBG644081
- OMA:   FINPWDG
- ProtClustDB:   CLSK870157
- BioCyc:   PMUL272843:PM0557-MONOMER
- InterPro:   IPR008940
- Gene3D:   G3DSA:1.25.40.120

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30577; Mature: 30577

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYVKKALYDEMLSFYHTTLGMEHEDRLRLRGQIGHLVRVARKEIPDTLETKAKIHLLLQ
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LFYGEWGFHCDPESYFLSSNLYLNDVLETRRGMPVSLGAILLYIADKLNLPLYPVNFPTQ
HHHCCCCCCCCCHHHEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCCCCE
LVIRAEVEGEVAFINPWDGQYISQALLHKWYEGAMGFGMTLTPTELAIANVGDLLGRFRQ
EEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
LAKNALIREEKNDEAFCYIARLIHYNPEDPYEIRDRGLVLAQMGCYHVATEDFQYFIDQC
HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHCCEEEEECCCHHHHHHHHHHHHHHC
PQDPTALLLKNQLEELKQDTYPIH
CCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNYVKKALYDEMLSFYHTTLGMEHEDRLRLRGQIGHLVRVARKEIPDTLETKAKIHLLLQ
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LFYGEWGFHCDPESYFLSSNLYLNDVLETRRGMPVSLGAILLYIADKLNLPLYPVNFPTQ
HHHCCCCCCCCCHHHEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCCCCE
LVIRAEVEGEVAFINPWDGQYISQALLHKWYEGAMGFGMTLTPTELAIANVGDLLGRFRQ
EEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
LAKNALIREEKNDEAFCYIARLIHYNPEDPYEIRDRGLVLAQMGCYHVATEDFQYFIDQC
HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHCCEEEEECCCHHHHHHHHHHHHHHC
PQDPTALLLKNQLEELKQDTYPIH
CCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100