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The map label for this gene is yedY [H]

Identifier: 15602402

GI number: 15602402

Start: 613696

End: 614727

Strand: Direct

Name: yedY [H]

Synonym: PM0537

Alternate gene names: 15602402

Gene position: 613696-614727 (Clockwise)

Preceding gene: 15602400

Following gene: 15602403

Centisome position: 27.18

GC content: 40.99

Gene sequence:

>1032_bases
ATGGTCATATCCATTAAATTAAAAAAACAGAAAAAGAAAGACCGAATTACTTGTCTTTATTGGGGGAATACTATGCATAA
ATTAAACGAAAATGATGTCACACCGGAACATATTTTTTTCGAACGTCGTAAAATCATTCAAAGTATGGGATTAATGGGGG
CGGCTTCATTATTGCCACGTTTCTCATTGGCTGCGGAGAAACAAGATTCTCGTCAAGCCTTACATTTTGCGAAAGATCAC
AATCCGCAAAACTTGCTGTTGACGCCTGAAAATAAAGTGATCGGTTATAACAATTTTTATGAATTTGGGGTGGATAAAGC
TTCTCCAGCCAAATATGCCTCTGCATTAAAAACGGAGCCTTGGACGTTGCGCATTGAAGGCGAAGTCGAAAAACCGATGA
CGTTTGATGTGCATCAGTTAATGCAGCAGCTACCATTGGAAGAGCGTATCTACCGTTTTCGTTGTGTTGAAGCGTGGTCG
ATGGTGATTCCTTGGATTGGTTTTGAACTGAATAAGTTATTGGCGTTAGTTCAGCCAACCAGTCAGGCGAAATATGTCGA
ATTTGAAACCTTGTATGAACCAGACAGTATGCCGGGACAAAAAAATCACTTTTTTGGTGGTGGCTTGATTTATCCTTATG
TAGAAGGGTTAACAATGGCAGAAGCTATGCATCCTTTAACGTTATTATCAGTGGGACTGTATGGCAAAACGTTAGCCCCT
CAGAATGGTGCCCCGATTCGTTTAGTCGTCCCTTGGAAATATGGCTTTAAGAATATTAAATCCATCGTGAAGATTACGCT
TAAATCAGAACAACCGATGACAACCTGGCATCACGCGGCTCCACATGAGTATGGTTTTTATGCCAATGTGAATCCCGAAG
TGGATCATCCACGTTGGTCACAAGCAAGTGAGCGCGTGATTGGTTCAGGTGGCTTATTGAGCGTGAAACGTCAGCCAACA
TTGCTGTTTAATGGTTATGCTGAACAGGTAGCACATTTATATCAAGATTTGGATTTAAGGACTTATTTCTGA

Upstream 100 bases:

>100_bases
TCATAACATGAATTGGGATAAACATTAGGACAATTCAGCCAGTTTGTTGCTTTCTTTTTTCATGTGATTTTGTGTAAGAA
GGTGAGCTTGATATCGTCTA

Downstream 100 bases:

>100_bases
TGTTAAGTTTGTTCAGAATTATCATTCATGTGTGTTGTTTAGGTCCAGTTGCTTGGCTAGCTTGGGTTTTGCTCAGTGGT
GATGAAAGCCAGCTCGGTGC

Product: putative sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MVISIKLKKQKKKDRITCLYWGNTMHKLNENDVTPEHIFFERRKIIQSMGLMGAASLLPRFSLAAEKQDSRQALHFAKDH
NPQNLLLTPENKVIGYNNFYEFGVDKASPAKYASALKTEPWTLRIEGEVEKPMTFDVHQLMQQLPLEERIYRFRCVEAWS
MVIPWIGFELNKLLALVQPTSQAKYVEFETLYEPDSMPGQKNHFFGGGLIYPYVEGLTMAEAMHPLTLLSVGLYGKTLAP
QNGAPIRLVVPWKYGFKNIKSIVKITLKSEQPMTTWHHAAPHEYGFYANVNPEVDHPRWSQASERVIGSGGLLSVKRQPT
LLFNGYAEQVAHLYQDLDLRTYF

Sequences:

>Translated_343_residues
MVISIKLKKQKKKDRITCLYWGNTMHKLNENDVTPEHIFFERRKIIQSMGLMGAASLLPRFSLAAEKQDSRQALHFAKDH
NPQNLLLTPENKVIGYNNFYEFGVDKASPAKYASALKTEPWTLRIEGEVEKPMTFDVHQLMQQLPLEERIYRFRCVEAWS
MVIPWIGFELNKLLALVQPTSQAKYVEFETLYEPDSMPGQKNHFFGGGLIYPYVEGLTMAEAMHPLTLLSVGLYGKTLAP
QNGAPIRLVVPWKYGFKNIKSIVKITLKSEQPMTTWHHAAPHEYGFYANVNPEVDHPRWSQASERVIGSGGLLSVKRQPT
LLFNGYAEQVAHLYQDLDLRTYF
>Mature_343_residues
MVISIKLKKQKKKDRITCLYWGNTMHKLNENDVTPEHIFFERRKIIQSMGLMGAASLLPRFSLAAEKQDSRQALHFAKDH
NPQNLLLTPENKVIGYNNFYEFGVDKASPAKYASALKTEPWTLRIEGEVEKPMTFDVHQLMQQLPLEERIYRFRCVEAWS
MVIPWIGFELNKLLALVQPTSQAKYVEFETLYEPDSMPGQKNHFFGGGLIYPYVEGLTMAEAMHPLTLLSVGLYGKTLAP
QNGAPIRLVVPWKYGFKNIKSIVKITLKSEQPMTTWHHAAPHEYGFYANVNPEVDHPRWSQASERVIGSGGLLSVKRQPT
LLFNGYAEQVAHLYQDLDLRTYF

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=328, Percent_Identity=64.0243902439024, Blast_Score=426, Evalue=1e-120,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 39375; Mature: 39375

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVISIKLKKQKKKDRITCLYWGNTMHKLNENDVTPEHIFFERRKIIQSMGLMGAASLLPR
CEEEEEECCCCCCCCEEEEEECCCCEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH
FSLAAEKQDSRQALHFAKDHNPQNLLLTPENKVIGYNNFYEFGVDKASPAKYASALKTEP
HHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCEECCCCHHCCCCCCCCHHHHHHHHCCCC
WTLRIEGEVEKPMTFDVHQLMQQLPLEERIYRFRCVEAWSMVIPWIGFELNKLLALVQPT
EEEEECCCCCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
SQAKYVEFETLYEPDSMPGQKNHFFGGGLIYPYVEGLTMAEAMHPLTLLSVGLYGKTLAP
CCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCC
QNGAPIRLVVPWKYGFKNIKSIVKITLKSEQPMTTWHHAAPHEYGFYANVNPEVDHPRWS
CCCCCEEEEEECHHCHHHHHHHHEEEECCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCC
QASERVIGSGGLLSVKRQPTLLFNGYAEQVAHLYQDLDLRTYF
CHHHHEECCCCEEEEECCCEEEECCHHHHHHHHHHCCCCEECC
>Mature Secondary Structure
MVISIKLKKQKKKDRITCLYWGNTMHKLNENDVTPEHIFFERRKIIQSMGLMGAASLLPR
CEEEEEECCCCCCCCEEEEEECCCCEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH
FSLAAEKQDSRQALHFAKDHNPQNLLLTPENKVIGYNNFYEFGVDKASPAKYASALKTEP
HHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCEECCCCHHCCCCCCCCHHHHHHHHCCCC
WTLRIEGEVEKPMTFDVHQLMQQLPLEERIYRFRCVEAWSMVIPWIGFELNKLLALVQPT
EEEEECCCCCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
SQAKYVEFETLYEPDSMPGQKNHFFGGGLIYPYVEGLTMAEAMHPLTLLSVGLYGKTLAP
CCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCC
QNGAPIRLVVPWKYGFKNIKSIVKITLKSEQPMTTWHHAAPHEYGFYANVNPEVDHPRWS
CCCCCEEEEEECHHCHHHHHHHHEEEECCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCC
QASERVIGSGGLLSVKRQPTLLFNGYAEQVAHLYQDLDLRTYF
CHHHHEECCCCEEEEECCCEEEECCHHHHHHHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]