| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is yxxF [H]
Identifier: 15602326
GI number: 15602326
Start: 537170
End: 538030
Strand: Reverse
Name: yxxF [H]
Synonym: PM0461
Alternate gene names: 15602326
Gene position: 538030-537170 (Counterclockwise)
Preceding gene: 15602327
Following gene: 15602323
Centisome position: 23.83
GC content: 44.25
Gene sequence:
>861_bases ATGGCGATAATTAAGGATAATTACAGCTTAGCATTGCTTAAGGTACACGGCACCGCAGTGTTATTTGGTGCCTCTGGTGT TTTTGGCGCATTAGCCACCACAGGTGCAGAAATGATTGTCTTAGGGCGTGTCTTAATTGCCTTTGCTGCGCTTTCACTTT TTTTCTTACTCCGTCGGCAAAAACTGATCCCCATGCAAGGGCGTGAAATCGCCAGCCAGTGTCTTTCTGGGGTGTTATTA GGTGTACATTGGGTGAGTTTTTACCAAGGGATAAAAATAGGTGGTGTGGCGATTGGTACTTTAGGCTTTGCCAGTTTCCC CGCCTTCGTTGCTTTGTTTGAAATGCTGTTCTTTAAAGAGCGGTTAAAAACAAAAGAATACTTTTTGCTGATCGCGATTT CGCTTGGGCTGATTTTGATTACCCCTGCCTTTGAGTTTGGTCATCAAGCTACACAAGGGTTACTGTGGGGCATTTTTTCC GCCCTCAGTTATGGCATATTAGCGGTCATCAATCGCAAAAACGTCAGCAAAATATCAGGTTCACAATCCAGTTGGTGTCA ATATTTAGTGGTCGCCATTATGCTGTTGCCCTTTTCTGCACACCAGTTACCTGATGTGTCTTGGCAAGATTGGTTTTGGA TCGCTTGTATTGGCTTACTTTGCACAACCTTGGCTTATACCCTATTTGTTTCTAGCTTAGATACGATCAATGCGCGCACT GCTGCGATGATCATTTCTCTTGAACCGGTATATGCCATTGCGATCGCGTGGATTTGGCTAGACGAAGAACCGAGTCTGCG TATGTTACTCGGTGGAGCATTAATTATTGTCTCCGTCGCGATTGTCAATTTGAAAAAATAG
Upstream 100 bases:
>100_bases TGAAGCAGGCTTTATGTCACTCGCCCATTCTGATCAAGATATTGAGCGCACTTTGCAAGCTGCCGATCAAGTTTTCTCTC AGTTAGCTTAAAGGCAGTGT
Downstream 100 bases:
>100_bases ATAACCTTAAAAAAACAGACCGCACTTTTACATGGGATTTATACATCACTTGATAAACACCTCCCTCAACGTGCGGTCAT TTTGGAAAACGTTTTCTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MAIIKDNYSLALLKVHGTAVLFGASGVFGALATTGAEMIVLGRVLIAFAALSLFFLLRRQKLIPMQGREIASQCLSGVLL GVHWVSFYQGIKIGGVAIGTLGFASFPAFVALFEMLFFKERLKTKEYFLLIAISLGLILITPAFEFGHQATQGLLWGIFS ALSYGILAVINRKNVSKISGSQSSWCQYLVVAIMLLPFSAHQLPDVSWQDWFWIACIGLLCTTLAYTLFVSSLDTINART AAMIISLEPVYAIAIAWIWLDEEPSLRMLLGGALIIVSVAIVNLKK
Sequences:
>Translated_286_residues MAIIKDNYSLALLKVHGTAVLFGASGVFGALATTGAEMIVLGRVLIAFAALSLFFLLRRQKLIPMQGREIASQCLSGVLL GVHWVSFYQGIKIGGVAIGTLGFASFPAFVALFEMLFFKERLKTKEYFLLIAISLGLILITPAFEFGHQATQGLLWGIFS ALSYGILAVINRKNVSKISGSQSSWCQYLVVAIMLLPFSAHQLPDVSWQDWFWIACIGLLCTTLAYTLFVSSLDTINART AAMIISLEPVYAIAIAWIWLDEEPSLRMLLGGALIIVSVAIVNLKK >Mature_285_residues AIIKDNYSLALLKVHGTAVLFGASGVFGALATTGAEMIVLGRVLIAFAALSLFFLLRRQKLIPMQGREIASQCLSGVLLG VHWVSFYQGIKIGGVAIGTLGFASFPAFVALFEMLFFKERLKTKEYFLLIAISLGLILITPAFEFGHQATQGLLWGIFSA LSYGILAVINRKNVSKISGSQSSWCQYLVVAIMLLPFSAHQLPDVSWQDWFWIACIGLLCTTLAYTLFVSSLDTINARTA AMIISLEPVYAIAIAWIWLDEEPSLRMLLGGALIIVSVAIVNLKK
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31214; Mature: 31082
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIIKDNYSLALLKVHGTAVLFGASGVFGALATTGAEMIVLGRVLIAFAALSLFFLLRRQ CEEEECCCCEEEEEEECEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH KLIPMQGREIASQCLSGVLLGVHWVSFYQGIKIGGVAIGTLGFASFPAFVALFEMLFFKE HCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEHHHHHHHHHHHHHHHHHHHHHH RLKTKEYFLLIAISLGLILITPAFEFGHQATQGLLWGIFSALSYGILAVINRKNVSKISG HHCCHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHCCC SQSSWCQYLVVAIMLLPFSAHQLPDVSWQDWFWIACIGLLCTTLAYTLFVSSLDTINART CHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH AAMIISLEPVYAIAIAWIWLDEEPSLRMLLGGALIIVSVAIVNLKK EEEEEEECHHHEEHEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AIIKDNYSLALLKVHGTAVLFGASGVFGALATTGAEMIVLGRVLIAFAALSLFFLLRRQ EEEECCCCEEEEEEECEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH KLIPMQGREIASQCLSGVLLGVHWVSFYQGIKIGGVAIGTLGFASFPAFVALFEMLFFKE HCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEHHHHHHHHHHHHHHHHHHHHHH RLKTKEYFLLIAISLGLILITPAFEFGHQATQGLLWGIFSALSYGILAVINRKNVSKISG HHCCHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHCCC SQSSWCQYLVVAIMLLPFSAHQLPDVSWQDWFWIACIGLLCTTLAYTLFVSSLDTINART CHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH AAMIISLEPVYAIAIAWIWLDEEPSLRMLLGGALIIVSVAIVNLKK EEEEEEECHHHEEHEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7704263; 9384377; 8316082 [H]