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The map label for this gene is ybfF [C]

Identifier: 15602220

GI number: 15602220

Start: 414796

End: 415584

Strand: Reverse

Name: ybfF [C]

Synonym: PM0355

Alternate gene names: 15602220

Gene position: 415584-414796 (Counterclockwise)

Preceding gene: 15602230

Following gene: 15602219

Centisome position: 18.41

GC content: 40.18

Gene sequence:

>789_bases
ATGTCTGAGAACAATTTACTTCACTTTCAATTTCATCAGTTAAAACAAGAAATTAATGCGCCGACTTTCGTTTTTATTCA
TGGTTTATTTGGTGATATGAATAATTTAGGCATTATCGCCAGAGCCTTTAGTGAAAAATATCCCATTTTACGTGTCGATT
TACGCAACCACGGACAAAGCTTTCACCACGAAGAGATGAATTATACGCTCATGGCAGAAGATCTCGCCAATGTCATTCAT
ACCCTTCAGCTCGAAAAAGTCATTTTAATTGGGCATTCCATGGGAGGAAAAACTGCCATGAAAATGACCGCACTTTATCC
CCATCTCGTCGAAAAATTGATTGTCATTGATATTGCGCCAGTCAAGTATGGTCACCATGGGCATGACGCTGTTTTTGCGG
GGCTATTTGCCACCAAACAAGCAAAACCGAAAACACGACAAGAAGCAAAACACTATTTAGCACAATATATTCCTGAGGAA
GCGATCCAACAATTCATGCTGAAATCCTTTGATGCCAATGCCAAAGAATATTTCCGTTTTAACCTCAGCGCATTACATGC
CAATTATCCTCACATCATGGATTGGCAACCTTGTCACTGTACCGTACCTACCCTCTTTATCCGTGGCGGACAATCAAACT
ATATCAAAACAGAAGACACACAACCTATTCTCGCACAATTTCCACAAGCCACCGCCTTTACTATAAATGGTTGTGGACAC
TGGGTTCACGCGGAAAAACCTGAGTTTGTCATACGCGCAATTGAAAGATTTTTAATATCAAACAAATAG

Upstream 100 bases:

>100_bases
ATCAACTTCAATAATTTTCATTTTTTCCTCCACTTGCTTGATCTCTTTCAGATTTTGCAACATTATAACGACTTCTTTAC
AAATACTCTATATACAAATT

Downstream 100 bases:

>100_bases
CCAAAGCGCGCAGAAATTCGTGTTTTAATCCCACATAAATTGTGTTATAGTTCAGCATTAATTTAGTTGTGGCTTATCAT
TCTCACTTAGCCACAGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MSENNLLHFQFHQLKQEINAPTFVFIHGLFGDMNNLGIIARAFSEKYPILRVDLRNHGQSFHHEEMNYTLMAEDLANVIH
TLQLEKVILIGHSMGGKTAMKMTALYPHLVEKLIVIDIAPVKYGHHGHDAVFAGLFATKQAKPKTRQEAKHYLAQYIPEE
AIQQFMLKSFDANAKEYFRFNLSALHANYPHIMDWQPCHCTVPTLFIRGGQSNYIKTEDTQPILAQFPQATAFTINGCGH
WVHAEKPEFVIRAIERFLISNK

Sequences:

>Translated_262_residues
MSENNLLHFQFHQLKQEINAPTFVFIHGLFGDMNNLGIIARAFSEKYPILRVDLRNHGQSFHHEEMNYTLMAEDLANVIH
TLQLEKVILIGHSMGGKTAMKMTALYPHLVEKLIVIDIAPVKYGHHGHDAVFAGLFATKQAKPKTRQEAKHYLAQYIPEE
AIQQFMLKSFDANAKEYFRFNLSALHANYPHIMDWQPCHCTVPTLFIRGGQSNYIKTEDTQPILAQFPQATAFTINGCGH
WVHAEKPEFVIRAIERFLISNK
>Mature_261_residues
SENNLLHFQFHQLKQEINAPTFVFIHGLFGDMNNLGIIARAFSEKYPILRVDLRNHGQSFHHEEMNYTLMAEDLANVIHT
LQLEKVILIGHSMGGKTAMKMTALYPHLVEKLIVIDIAPVKYGHHGHDAVFAGLFATKQAKPKTRQEAKHYLAQYIPEEA
IQQFMLKSFDANAKEYFRFNLSALHANYPHIMDWQPCHCTVPTLFIRGGQSNYIKTEDTQPILAQFPQATAFTINGCGHW
VHAEKPEFVIRAIERFLISNK

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

Organism=Homo sapiens, GI23200008, Length=268, Percent_Identity=33.5820895522388, Blast_Score=156, Evalue=1e-38,
Organism=Homo sapiens, GI23200012, Length=256, Percent_Identity=34.375, Blast_Score=154, Evalue=5e-38,
Organism=Homo sapiens, GI223941839, Length=267, Percent_Identity=27.3408239700375, Blast_Score=97, Evalue=1e-20,
Organism=Escherichia coli, GI1786902, Length=245, Percent_Identity=45.7142857142857, Blast_Score=224, Evalue=6e-60,
Organism=Caenorhabditis elegans, GI17508535, Length=256, Percent_Identity=34.765625, Blast_Score=137, Evalue=7e-33,
Organism=Caenorhabditis elegans, GI17507063, Length=250, Percent_Identity=27.6, Blast_Score=87, Evalue=7e-18,
Organism=Saccharomyces cerevisiae, GI6321468, Length=268, Percent_Identity=31.7164179104478, Blast_Score=101, Evalue=9e-23,
Organism=Drosophila melanogaster, GI24640348, Length=269, Percent_Identity=28.6245353159851, Blast_Score=100, Evalue=9e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR012908 [H]

Pfam domain/function: PF00561 Abhydrolase_1; PF07819 PGAP1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 30024; Mature: 29893

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENNLLHFQFHQLKQEINAPTFVFIHGLFGDMNNLGIIARAFSEKYPILRVDLRNHGQS
CCCCCEEEHHHHHHHHHHCCCEEEEEEEHHCCCCCCHHHEEHHCCCCCEEEEEHHHCCCC
FHHEEMNYTLMAEDLANVIHTLQLEKVILIGHSMGGKTAMKMTALYPHLVEKLIVIDIAP
CCHHHCCEEEEHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEEC
VKYGHHGHDAVFAGLFATKQAKPKTRQEAKHYLAQYIPEEAIQQFMLKSFDANAKEYFRF
CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHEE
NLSALHANYPHIMDWQPCHCTVPTLFIRGGQSNYIKTEDTQPILAQFPQATAFTINGCGH
EHHHEECCCCCCCCCCCCEEECCEEEEECCCCCCEECCCCCHHHHHCCCCEEEEECCCCC
WVHAEKPEFVIRAIERFLISNK
CCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SENNLLHFQFHQLKQEINAPTFVFIHGLFGDMNNLGIIARAFSEKYPILRVDLRNHGQS
CCCCEEEHHHHHHHHHHCCCEEEEEEEHHCCCCCCHHHEEHHCCCCCEEEEEHHHCCCC
FHHEEMNYTLMAEDLANVIHTLQLEKVILIGHSMGGKTAMKMTALYPHLVEKLIVIDIAP
CCHHHCCEEEEHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEEC
VKYGHHGHDAVFAGLFATKQAKPKTRQEAKHYLAQYIPEEAIQQFMLKSFDANAKEYFRF
CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHEE
NLSALHANYPHIMDWQPCHCTVPTLFIRGGQSNYIKTEDTQPILAQFPQATAFTINGCGH
EHHHEECCCCCCCCCCCCEEECCEEEEECCCCCCEECCCCCHHHHHCCCCEEEEECCCCC
WVHAEKPEFVIRAIERFLISNK
CCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]