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The map label for this gene is yjcD [C]

Identifier: 15602152

GI number: 15602152

Start: 327076

End: 328389

Strand: Direct

Name: yjcD [C]

Synonym: PM0287

Alternate gene names: 15602152

Gene position: 327076-328389 (Clockwise)

Preceding gene: 15602148

Following gene: 15602161

Centisome position: 14.49

GC content: 43.07

Gene sequence:

>1314_bases
ATGTCGTTAGAAAAACATTTTGAGATGACGAAACGTGGCTCAAATGTGCGTCAAGAAGTCATTGCCGGTTTAACCACCTT
CTTAGCTATGGTGTATTCGGTGATTGTGGTACCAAATATGTTGGGCGCAGCAGGTTTTCCTGCTGAATCTGTGTTTATTG
CGACCTGTTTAGTGGCAGGTTTAGGTTCGTTATTGATTGGTTTATGGGCAAATGTGCCTATGGCGATTGGTTGTGCGATC
TCCTTAACCGCATTTACGGCATTTAGCTTAGTATTAGGTCAACAAGTCAGCATTCCTGTCGCATTAGGTGCCGTTTTCTT
AATGGGGGTGGTGTTTACTATTATTTCTGCAACGGGGATTCGTGCTTGGATTTTACGTAATTTGCCAAGTAGCATTGCAC
ATGGTGCTGGGATTGGTATCGGTTTATTTCTTTTATTAATTGCGGCGAATGGTGTGGGGCTTGTAGTGAGTAATCAAGCG
GGCTTACCGGTAAAAATGGGTGAATTTACATCGTTTCCCGTATTAATGTCATTAATTGGCTTAGCGTTGATCATTGGCCT
AGAAAAAATGAGAGTGAAAGGCGCGATTTTATGGGTGATTATTGCGATCACATTAGTCGGCTTGGTTTTTGATCCGAATG
TTAAATTTGGCGGTAGCATTTTTAAAATGCCAACTTTTGGTGAAAACTCATTATTCCTTGAATTAGATTTAATGGGTGCA
TTACAACCGGCTATTTTGCCTGTAGTGTTTGCCCTTGTGATGACCGCGGTATTTGATGCGACAGGTACGATTCGTGCGGT
GGCAGGTCAAGCCAATTTATTAGACAAAGAGGGGCAAATTATCAATGGCGGGAAAGCCTTAACTTCAGACTCTGTCAGCA
GTATTTTTTCTGGTATTTTCGGTACTGCGCCGGCTGCGGTATATATTGAATCGGCAGCAGGAACAGCCGCAGGCGGTAAA
ACGGGCTTAACCGCTGTCGTGGTAGGCGTGTTATTCCTATTAATGTTGTTTTTCCAACCTTTAGCTTTCTTAGTCCCGGG
TTATGCCACTGCGCCTGCCTTGATGTATGTTGGTTTATTGATGTTAAGTAACGTCAGTAAATTAGATTTTGATGATTTTA
TTGGCGCAATGAGCGGCTTAGTTTGTGCGGTGTTCATCGTGTTAACGGCAAACATTGTCACTGGTATTATGTTAGGCTTT
GCCGCGTTAGTGATCGGGCGAGTTGTGTCTGGTGAAGTGAAAAAGCTCAATGTGGGTACCGTTTTGATTGCGATAGCATT
AGTGGCATTCTATGCTTTTGGTTGGGCAATCTAA

Upstream 100 bases:

>100_bases
AAAATGTTAGCAAACGATTACGCAAACGTTTACTCTTGGAAAAAATAGCGTAGAATATGCGCTTATTTTTTATTTACTAC
GTTAACTTTAAGGAAACAAT

Downstream 100 bases:

>100_bases
ACTTCACGCGTTCCGAAAAAAACATAGTCGCATTAATGCGACTATGTGAAAACATGAGAAAGACAGCGTTATGCTCCGCT
TGGTGCAAAAACGTTGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MSLEKHFEMTKRGSNVRQEVIAGLTTFLAMVYSVIVVPNMLGAAGFPAESVFIATCLVAGLGSLLIGLWANVPMAIGCAI
SLTAFTAFSLVLGQQVSIPVALGAVFLMGVVFTIISATGIRAWILRNLPSSIAHGAGIGIGLFLLLIAANGVGLVVSNQA
GLPVKMGEFTSFPVLMSLIGLALIIGLEKMRVKGAILWVIIAITLVGLVFDPNVKFGGSIFKMPTFGENSLFLELDLMGA
LQPAILPVVFALVMTAVFDATGTIRAVAGQANLLDKEGQIINGGKALTSDSVSSIFSGIFGTAPAAVYIESAAGTAAGGK
TGLTAVVVGVLFLLMLFFQPLAFLVPGYATAPALMYVGLLMLSNVSKLDFDDFIGAMSGLVCAVFIVLTANIVTGIMLGF
AALVIGRVVSGEVKKLNVGTVLIAIALVAFYAFGWAI

Sequences:

>Translated_437_residues
MSLEKHFEMTKRGSNVRQEVIAGLTTFLAMVYSVIVVPNMLGAAGFPAESVFIATCLVAGLGSLLIGLWANVPMAIGCAI
SLTAFTAFSLVLGQQVSIPVALGAVFLMGVVFTIISATGIRAWILRNLPSSIAHGAGIGIGLFLLLIAANGVGLVVSNQA
GLPVKMGEFTSFPVLMSLIGLALIIGLEKMRVKGAILWVIIAITLVGLVFDPNVKFGGSIFKMPTFGENSLFLELDLMGA
LQPAILPVVFALVMTAVFDATGTIRAVAGQANLLDKEGQIINGGKALTSDSVSSIFSGIFGTAPAAVYIESAAGTAAGGK
TGLTAVVVGVLFLLMLFFQPLAFLVPGYATAPALMYVGLLMLSNVSKLDFDDFIGAMSGLVCAVFIVLTANIVTGIMLGF
AALVIGRVVSGEVKKLNVGTVLIAIALVAFYAFGWAI
>Mature_436_residues
SLEKHFEMTKRGSNVRQEVIAGLTTFLAMVYSVIVVPNMLGAAGFPAESVFIATCLVAGLGSLLIGLWANVPMAIGCAIS
LTAFTAFSLVLGQQVSIPVALGAVFLMGVVFTIISATGIRAWILRNLPSSIAHGAGIGIGLFLLLIAANGVGLVVSNQAG
LPVKMGEFTSFPVLMSLIGLALIIGLEKMRVKGAILWVIIAITLVGLVFDPNVKFGGSIFKMPTFGENSLFLELDLMGAL
QPAILPVVFALVMTAVFDATGTIRAVAGQANLLDKEGQIINGGKALTSDSVSSIFSGIFGTAPAAVYIESAAGTAAGGKT
GLTAVVVGVLFLLMLFFQPLAFLVPGYATAPALMYVGLLMLSNVSKLDFDDFIGAMSGLVCAVFIVLTANIVTGIMLGFA
ALVIGRVVSGEVKKLNVGTVLIAIALVAFYAFGWAI

Specific function: Unknown

COG id: COG2252

COG function: function code R; Permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790499, Length=440, Percent_Identity=75.6818181818182, Blast_Score=652, Evalue=0.0,
Organism=Escherichia coli, GI48994909, Length=440, Percent_Identity=77.5, Blast_Score=638, Evalue=0.0,
Organism=Escherichia coli, GI87082309, Length=423, Percent_Identity=39.4799054373522, Blast_Score=283, Evalue=2e-77,
Organism=Escherichia coli, GI1790150, Length=423, Percent_Identity=36.4066193853428, Blast_Score=249, Evalue=3e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006043 [H]

Pfam domain/function: PF00860 Xan_ur_permease [H]

EC number: NA

Molecular weight: Translated: 45159; Mature: 45028

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLEKHFEMTKRGSNVRQEVIAGLTTFLAMVYSVIVVPNMLGAAGFPAESVFIATCLVAG
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LGSLLIGLWANVPMAIGCAISLTAFTAFSLVLGQQVSIPVALGAVFLMGVVFTIISATGI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RAWILRNLPSSIAHGAGIGIGLFLLLIAANGVGLVVSNQAGLPVKMGEFTSFPVLMSLIG
HHHHHHHCHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEECCCCCCHHHHHHHHH
LALIIGLEKMRVKGAILWVIIAITLVGLVFDPNVKFGGSIFKMPTFGENSLFLELDLMGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEEEEHHHH
LQPAILPVVFALVMTAVFDATGTIRAVAGQANLLDKEGQIINGGKALTSDSVSSIFSGIF
HHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHCCCCCCEECCCCCCCHHHHHHHHHHHH
GTAPAAVYIESAAGTAAGGKTGLTAVVVGVLFLLMLFFQPLAFLVPGYATAPALMYVGLL
CCCCHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
MLSNVSKLDFDDFIGAMSGLVCAVFIVLTANIVTGIMLGFAALVIGRVVSGEVKKLNVGT
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHH
VLIAIALVAFYAFGWAI
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLEKHFEMTKRGSNVRQEVIAGLTTFLAMVYSVIVVPNMLGAAGFPAESVFIATCLVAG
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LGSLLIGLWANVPMAIGCAISLTAFTAFSLVLGQQVSIPVALGAVFLMGVVFTIISATGI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RAWILRNLPSSIAHGAGIGIGLFLLLIAANGVGLVVSNQAGLPVKMGEFTSFPVLMSLIG
HHHHHHHCHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEECCCCCCHHHHHHHHH
LALIIGLEKMRVKGAILWVIIAITLVGLVFDPNVKFGGSIFKMPTFGENSLFLELDLMGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEEEEHHHH
LQPAILPVVFALVMTAVFDATGTIRAVAGQANLLDKEGQIINGGKALTSDSVSSIFSGIF
HHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHCCCCCCEECCCCCCCHHHHHHHHHHHH
GTAPAAVYIESAAGTAAGGKTGLTAVVVGVLFLLMLFFQPLAFLVPGYATAPALMYVGLL
CCCCHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
MLSNVSKLDFDDFIGAMSGLVCAVFIVLTANIVTGIMLGFAALVIGRVVSGEVKKLNVGT
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHH
VLIAIALVAFYAFGWAI
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]