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The map label for this gene is ygiY [H]

Identifier: 15602080

GI number: 15602080

Start: 239076

End: 240449

Strand: Direct

Name: ygiY [H]

Synonym: PM0215

Alternate gene names: 15602080

Gene position: 239076-240449 (Clockwise)

Preceding gene: 15602079

Following gene: 15602081

Centisome position: 10.59

GC content: 40.76

Gene sequence:

>1374_bases
ATGAAATGGCTTAAGCAAACAAGTTTACGGGTTCGTTTAATTTTCACGTTATCGTTGACCGCATTAGTGATTTGGTTAGC
TTCAACCGCAGTGGCGTGGTTTCAAGTAAGAAAAGAAGTGAATGATGTTTTTGATGCGCAACAGATTCTATTAGCTCAGC
GTTTGGCCTCAGCGAATTTACATAATATGCTGATTGCTCGTGCCCCTCATGATGTGAATAAACAGCTCAAGAAAGTTCGG
CACTATGATGACGATGCTCTTGCTTTTGCAATTTTTAATCATCGCGGTGATCTTCTTTTAAGCGATGGGAATAATGGGGA
AAATTTCATTTTTGCACCGCACAATGGTTTTTCAGTCAGTGCTATCCGTGAAGATGACGATCGTTGGCGGATTTTTTGGT
TGCCAGTCAATCAAGGAAAATGGATTATTGCCGTAGGGCAAGAAATGGACTATCGCGAAGATCTGATTAACCAAATGGTG
TTTGGGCAAATGTGGATTTGGTTCGCGAGTTTACCTTTTTTATTAGGGATTTTGGTTTGGGTGATTAGCCGTGAGCTGCG
ACCGCTAAAACAAGTGAATGCGCAGTTAATGCAACGCCGTCCAGATGATACTTCACTTTTACCGAGTGAAAATTTACCGA
CAGAAATTTTACCGTTAATCCACAATTTAAATCATTTCTTTGAGCGAACTGCCACGATGTTATTGCGTGAGCGACGTTTT
ACTTCAGATGCCGCACATGAATTACGTAGTCCATTGGCGGCATTGCGCATTCAAACTGAAGTTGCACAAATGGCAGGAGA
TGATGCTTTGATGCGCGAGCAAGCCTTGCAAAACTTAACGTTAGGGATTGATCGTGCTAGTCAATTAATTGAACGTTTAC
TCACGCTCTCTCGTTTGGATAATTTAGCTGAGTTAGATGAAATGGAAGCGATTCATTGGGAGCCGTTAATTGCGTCTTTA
GTGAGTGAACTTTATTTTTCCGCGCAAAAACGGCAAATGGATCTCCAATTTGAATTAATTGCCGCGCCACCGGTGCAACA
AGGGCAACCCCTTTTATTATCATTAATGTTACGTAATTTGATTGATAATGCGCTTCGCTATTGCCCAGAAGGAAGTAGCA
TAACGATTAAGCTTTATGCCGATCGTATTGTGATTGAAGATAATGGCAATGGGGTGAATGATGCCGATTTAGCGAAGTTA
GGACAGCGTTTTTATCGTCCTGCAGGGCAAAATGAAAAGGGAAGTGGATTGGGTTTATCGATTGTTCAGCGCATTGCCAC
CCTACATCATTATCAATTCCGGTTAGAAAATGTGAAAGATGATAAGGGTTATATAAAAGGATTTAGATCGTTGATTTTAT
TAAATAAAATTTGA

Upstream 100 bases:

>100_bases
AGTAATGCCTTGGAGGTCCATATTTATAATTTACGCCAAAAATTAGGGAAACAATTTATTCGTACTGTGCATGGTGTAGG
GTATGCGCTAGGAAAAAATG

Downstream 100 bases:

>100_bases
TTTTTTTAACTTGTTTTATTTTGCATCTTGGATATAATTGCGACGAATTCGTAGTGAATTTTATCCATTTTATTAAGAGG
AAAAAACATGAAAATTAGTG

Product: YgiY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MKWLKQTSLRVRLIFTLSLTALVIWLASTAVAWFQVRKEVNDVFDAQQILLAQRLASANLHNMLIARAPHDVNKQLKKVR
HYDDDALAFAIFNHRGDLLLSDGNNGENFIFAPHNGFSVSAIREDDDRWRIFWLPVNQGKWIIAVGQEMDYREDLINQMV
FGQMWIWFASLPFLLGILVWVISRELRPLKQVNAQLMQRRPDDTSLLPSENLPTEILPLIHNLNHFFERTATMLLRERRF
TSDAAHELRSPLAALRIQTEVAQMAGDDALMREQALQNLTLGIDRASQLIERLLTLSRLDNLAELDEMEAIHWEPLIASL
VSELYFSAQKRQMDLQFELIAAPPVQQGQPLLLSLMLRNLIDNALRYCPEGSSITIKLYADRIVIEDNGNGVNDADLAKL
GQRFYRPAGQNEKGSGLGLSIVQRIATLHHYQFRLENVKDDKGYIKGFRSLILLNKI

Sequences:

>Translated_457_residues
MKWLKQTSLRVRLIFTLSLTALVIWLASTAVAWFQVRKEVNDVFDAQQILLAQRLASANLHNMLIARAPHDVNKQLKKVR
HYDDDALAFAIFNHRGDLLLSDGNNGENFIFAPHNGFSVSAIREDDDRWRIFWLPVNQGKWIIAVGQEMDYREDLINQMV
FGQMWIWFASLPFLLGILVWVISRELRPLKQVNAQLMQRRPDDTSLLPSENLPTEILPLIHNLNHFFERTATMLLRERRF
TSDAAHELRSPLAALRIQTEVAQMAGDDALMREQALQNLTLGIDRASQLIERLLTLSRLDNLAELDEMEAIHWEPLIASL
VSELYFSAQKRQMDLQFELIAAPPVQQGQPLLLSLMLRNLIDNALRYCPEGSSITIKLYADRIVIEDNGNGVNDADLAKL
GQRFYRPAGQNEKGSGLGLSIVQRIATLHHYQFRLENVKDDKGYIKGFRSLILLNKI
>Mature_457_residues
MKWLKQTSLRVRLIFTLSLTALVIWLASTAVAWFQVRKEVNDVFDAQQILLAQRLASANLHNMLIARAPHDVNKQLKKVR
HYDDDALAFAIFNHRGDLLLSDGNNGENFIFAPHNGFSVSAIREDDDRWRIFWLPVNQGKWIIAVGQEMDYREDLINQMV
FGQMWIWFASLPFLLGILVWVISRELRPLKQVNAQLMQRRPDDTSLLPSENLPTEILPLIHNLNHFFERTATMLLRERRF
TSDAAHELRSPLAALRIQTEVAQMAGDDALMREQALQNLTLGIDRASQLIERLLTLSRLDNLAELDEMEAIHWEPLIASL
VSELYFSAQKRQMDLQFELIAAPPVQQGQPLLLSLMLRNLIDNALRYCPEGSSITIKLYADRIVIEDNGNGVNDADLAKL
GQRFYRPAGQNEKGSGLGLSIVQRIATLHHYQFRLENVKDDKGYIKGFRSLILLNKI

Specific function: Member of a two-component regulatory system qseB/qseC. May activate qseB by phosphorylation [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=440, Percent_Identity=46.3636363636364, Blast_Score=372, Evalue=1e-104,
Organism=Escherichia coli, GI1790551, Length=298, Percent_Identity=32.2147651006711, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1786783, Length=467, Percent_Identity=24.8394004282655, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1786600, Length=263, Percent_Identity=27.7566539923954, Blast_Score=89, Evalue=7e-19,
Organism=Escherichia coli, GI1788279, Length=303, Percent_Identity=28.3828382838284, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1788393, Length=251, Percent_Identity=29.0836653386454, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1790861, Length=200, Percent_Identity=31, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI87082128, Length=275, Percent_Identity=26.5454545454545, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1790346, Length=252, Percent_Identity=26.984126984127, Blast_Score=72, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 52377; Mature: 52377

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWLKQTSLRVRLIFTLSLTALVIWLASTAVAWFQVRKEVNDVFDAQQILLAQRLASANL
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
HNMLIARAPHDVNKQLKKVRHYDDDALAFAIFNHRGDLLLSDGNNGENFIFAPHNGFSVS
HHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCCEEEEECCCCCEEE
AIREDDDRWRIFWLPVNQGKWIIAVGQEMDYREDLINQMVFGQMWIWFASLPFLLGILVW
EEECCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VISRELRPLKQVNAQLMQRRPDDTSLLPSENLPTEILPLIHNLNHFFERTATMLLRERRF
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
TSDAAHELRSPLAALRIQTEVAQMAGDDALMREQALQNLTLGIDRASQLIERLLTLSRLD
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLAELDEMEAIHWEPLIASLVSELYFSAQKRQMDLQFELIAAPPVQQGQPLLLSLMLRNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHH
IDNALRYCPEGSSITIKLYADRIVIEDNGNGVNDADLAKLGQRFYRPAGQNEKGSGLGLS
HHHHHHHCCCCCEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHH
IVQRIATLHHYQFRLENVKDDKGYIKGFRSLILLNKI
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKWLKQTSLRVRLIFTLSLTALVIWLASTAVAWFQVRKEVNDVFDAQQILLAQRLASANL
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
HNMLIARAPHDVNKQLKKVRHYDDDALAFAIFNHRGDLLLSDGNNGENFIFAPHNGFSVS
HHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCCEEEEECCCCCEEE
AIREDDDRWRIFWLPVNQGKWIIAVGQEMDYREDLINQMVFGQMWIWFASLPFLLGILVW
EEECCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VISRELRPLKQVNAQLMQRRPDDTSLLPSENLPTEILPLIHNLNHFFERTATMLLRERRF
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
TSDAAHELRSPLAALRIQTEVAQMAGDDALMREQALQNLTLGIDRASQLIERLLTLSRLD
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLAELDEMEAIHWEPLIASLVSELYFSAQKRQMDLQFELIAAPPVQQGQPLLLSLMLRNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHH
IDNALRYCPEGSSITIKLYADRIVIEDNGNGVNDADLAKLGQRFYRPAGQNEKGSGLGLS
HHHHHHHCCCCCEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHH
IVQRIATLHHYQFRLENVKDDKGYIKGFRSLILLNKI
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]