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The map label for this gene is lptF [H]

Identifier: 15602061

GI number: 15602061

Start: 219576

End: 220682

Strand: Direct

Name: lptF [H]

Synonym: PM0196

Alternate gene names: 15602061

Gene position: 219576-220682 (Clockwise)

Preceding gene: 15602059

Following gene: 15602062

Centisome position: 9.73

GC content: 40.11

Gene sequence:

>1107_bases
GTGATTTTAACTCGATATTTAACAAAGGAAGTGTTGAAGAGCCAGTTGGCGATCTTATTCATTTTACTTCTTATTTTCTT
CTGCCAGCAATTAGTGCGTGTATTAGGCTCGGCAGCCAGTGGTAAAGTACCAGCAGATTTAGTGATGTCCTTATTAGGGC
TTGGTATGCCTACCATGGCGCAATTGATGTTGCCACTATGTTTATTTATTGCGATTTTATTAACTTTTGGTCGTTTATAT
GCTGAGAGTGAAATCACGGTGATGCGTGCTTGTGGTGTGGGACAGAAAATCTTAGTACGTGTTGTACTTATTCTTTCTTT
ATTTACCGCATCAATTGCCGCGTATAATGTGTTTTGGTTGACACCTTGGGCGATTCAAAAACAAAGTGAAATTTTGGAAG
GTGCAAAAGCCAATCCTACAATGGGAGCGCTTGCTTCGGGGCAATTTATTAACACCAATAATAATGAATTTGTCTTATTT
ATTGACAGCATTAAAGACAATACCATTCATGATGTTTATGTTTTTCAAACGCGTGAGAGAGGCAATTTAAAACCGTCAGT
ACTGGTAGCGGAGAAAGGCGAGCTACAAGCCTTGCCTAATGGGGATCAAATTCTCAAACTTGAAAATAGCCAACGTGTAG
AAGGCAGCAGTGCTTTTCCTGATTTCCGTATTACGCATTTTGAAGAGTATCAAGCTTATTTAGGTTATCAAGATAAAAAC
AATGATGAACAGGAAACGGAAGAGTTAGGTTTTTGGGATTTGATGAAAACTCATACCCCGGCAGCTAAAGCAGAATTGAA
TTGGCGTTTAAGTCTGATCTTGGCGGTGCCTTTAATGGCGCTGATAGCGGTGCCATTAAGCCGAGTGAACCCTCGCCAAG
GTCGTTTCGCAAAAGTATTACCCGCGTTGTTACTGTATTTAATTTATTTTCTGCTACAAAGTTCACTGAAGTCTGCTTGG
GCTGCGGGTAAATTGGATGGAAGCGTATTAATGCCGTTAGTGAATATACTCTTTTTCCTATTGGGGCTTTTGTTGAATAG
CTGGGGAAGCGCTTCGATGTATAAAGTGCGGTATTGGTTGAATAAGAATCTGGCGATAAAAGGATAA

Upstream 100 bases:

>100_bases
TTTACTGTTTTCACCTTAAAAATACGTTATCATACGAAAATTAAGCAGTCTTGAAACTAAACTATTCTATATAAATTGCA
AGAAAAATATAGGCAATAAT

Downstream 100 bases:

>100_bases
GCAAAAATGATGAGCACCTTAGACCGTTATTTAGGTAAAAGTATTTTAGGCGCAATTTTTGCTACCTTAATTATGCTAGT
AGGGCTTTCCGGCATTATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MILTRYLTKEVLKSQLAILFILLLIFFCQQLVRVLGSAASGKVPADLVMSLLGLGMPTMAQLMLPLCLFIAILLTFGRLY
AESEITVMRACGVGQKILVRVVLILSLFTASIAAYNVFWLTPWAIQKQSEILEGAKANPTMGALASGQFINTNNNEFVLF
IDSIKDNTIHDVYVFQTRERGNLKPSVLVAEKGELQALPNGDQILKLENSQRVEGSSAFPDFRITHFEEYQAYLGYQDKN
NDEQETEELGFWDLMKTHTPAAKAELNWRLSLILAVPLMALIAVPLSRVNPRQGRFAKVLPALLLYLIYFLLQSSLKSAW
AAGKLDGSVLMPLVNILFFLLGLLLNSWGSASMYKVRYWLNKNLAIKG

Sequences:

>Translated_368_residues
MILTRYLTKEVLKSQLAILFILLLIFFCQQLVRVLGSAASGKVPADLVMSLLGLGMPTMAQLMLPLCLFIAILLTFGRLY
AESEITVMRACGVGQKILVRVVLILSLFTASIAAYNVFWLTPWAIQKQSEILEGAKANPTMGALASGQFINTNNNEFVLF
IDSIKDNTIHDVYVFQTRERGNLKPSVLVAEKGELQALPNGDQILKLENSQRVEGSSAFPDFRITHFEEYQAYLGYQDKN
NDEQETEELGFWDLMKTHTPAAKAELNWRLSLILAVPLMALIAVPLSRVNPRQGRFAKVLPALLLYLIYFLLQSSLKSAW
AAGKLDGSVLMPLVNILFFLLGLLLNSWGSASMYKVRYWLNKNLAIKG
>Mature_368_residues
MILTRYLTKEVLKSQLAILFILLLIFFCQQLVRVLGSAASGKVPADLVMSLLGLGMPTMAQLMLPLCLFIAILLTFGRLY
AESEITVMRACGVGQKILVRVVLILSLFTASIAAYNVFWLTPWAIQKQSEILEGAKANPTMGALASGQFINTNNNEFVLF
IDSIKDNTIHDVYVFQTRERGNLKPSVLVAEKGELQALPNGDQILKLENSQRVEGSSAFPDFRITHFEEYQAYLGYQDKN
NDEQETEELGFWDLMKTHTPAAKAELNWRLSLILAVPLMALIAVPLSRVNPRQGRFAKVLPALLLYLIYFLLQSSLKSAW
AAGKLDGSVLMPLVNILFFLLGLLLNSWGSASMYKVRYWLNKNLAIKG

Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptF/lptG family [H]

Homologues:

Organism=Escherichia coli, GI1790712, Length=366, Percent_Identity=51.0928961748634, Blast_Score=332, Evalue=2e-92,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005495 [H]

Pfam domain/function: PF03739 YjgP_YjgQ [H]

EC number: NA

Molecular weight: Translated: 41110; Mature: 41110

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILTRYLTKEVLKSQLAILFILLLIFFCQQLVRVLGSAASGKVPADLVMSLLGLGMPTMA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHH
QLMLPLCLFIAILLTFGRLYAESEITVMRACGVGQKILVRVVLILSLFTASIAAYNVFWL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEE
TPWAIQKQSEILEGAKANPTMGALASGQFINTNNNEFVLFIDSIKDNTIHDVYVFQTRER
CCHHHHHHHHHHCCCCCCCCHHHHCCCCEEECCCCEEEEEEECCCCCCEEEEEEEEECCC
GNLKPSVLVAEKGELQALPNGDQILKLENSQRVEGSSAFPDFRITHFEEYQAYLGYQDKN
CCCCCEEEEECCCCEEECCCCCCEEEECCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCC
NDEQETEELGFWDLMKTHTPAAKAELNWRLSLILAVPLMALIAVPLSRVNPRQGRFAKVL
CCHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
PALLLYLIYFLLQSSLKSAWAAGKLDGSVLMPLVNILFFLLGLLLNSWGSASMYKVRYWL
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE
NKNLAIKG
CCCCCCCC
>Mature Secondary Structure
MILTRYLTKEVLKSQLAILFILLLIFFCQQLVRVLGSAASGKVPADLVMSLLGLGMPTMA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHH
QLMLPLCLFIAILLTFGRLYAESEITVMRACGVGQKILVRVVLILSLFTASIAAYNVFWL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEE
TPWAIQKQSEILEGAKANPTMGALASGQFINTNNNEFVLFIDSIKDNTIHDVYVFQTRER
CCHHHHHHHHHHCCCCCCCCHHHHCCCCEEECCCCEEEEEEECCCCCCEEEEEEEEECCC
GNLKPSVLVAEKGELQALPNGDQILKLENSQRVEGSSAFPDFRITHFEEYQAYLGYQDKN
CCCCCEEEEECCCCEEECCCCCCEEEECCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCC
NDEQETEELGFWDLMKTHTPAAKAELNWRLSLILAVPLMALIAVPLSRVNPRQGRFAKVL
CCHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
PALLLYLIYFLLQSSLKSAWAAGKLDGSVLMPLVNILFFLLGLLLNSWGSASMYKVRYWL
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE
NKNLAIKG
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]