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The map label for this gene is yrbD [C]

Identifier: 15602041

GI number: 15602041

Start: 200294

End: 200800

Strand: Direct

Name: yrbD [C]

Synonym: PM0176

Alternate gene names: 15602041

Gene position: 200294-200800 (Clockwise)

Preceding gene: 15602040

Following gene: 15602042

Centisome position: 8.87

GC content: 38.66

Gene sequence:

>507_bases
ATGCGACAAACAAGAATTTATGAATTTTGGGTAGGTTTGTTTTTATTATTGGGCATGGCAGCTTTAGTCTTTTTAGGTTT
GAAGGTGGCAAATATACAGGGCTTTAGCGAAACAAAATCTTATAAAATTCATGCAACTTTTGACAATATTGGTGGACTAA
AAGTCCGTGCACCTTTAAAAGTCGGTGGCGTTGTCATCGGACGCGTGGCAGATATTACTCTGGATGCAAAAAGTTATTTA
CCCATTGTGACGGTCGCGATTGATGAACGTTATAATGAAATTCCAGAAACAAGTTCATTATCAATTAAAACCTCAGGTTT
ATTAGGTGAACAATATATTGCCTTAAGTATCGGTTTTGACGATGGTGAAGTCGCGATGTGGAAAGAGGGTGACAAGGTTG
TTGACACAAAATCAGCCTTAGTGCTTGAGGATTTAGTCGGTCAATTCTTATATGGTGATCGTAATAAAAACGATCGCCAA
GAAGAGGGTGAACCAAAAGCGCAGTAG

Upstream 100 bases:

>100_bases
TCACTGGTTGTGTTGGGATTAGATTTTGTATTAACGGCACTGATGTTTGGTGCGAGTGTATAGGTGAGCGCTTGAATGCG
TTGGATGTAAAGGAAATTTT

Downstream 100 bases:

>100_bases
CGTATGATAAGAAATTTAGGAATGTAATTGAGTAGGAGAATGTTATGTTAACCATGTTGAAAAAAATGCTAGCAAAAATG
GTCGTGATAGCGACCGCACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MRQTRIYEFWVGLFLLLGMAALVFLGLKVANIQGFSETKSYKIHATFDNIGGLKVRAPLKVGGVVIGRVADITLDAKSYL
PIVTVAIDERYNEIPETSSLSIKTSGLLGEQYIALSIGFDDGEVAMWKEGDKVVDTKSALVLEDLVGQFLYGDRNKNDRQ
EEGEPKAQ

Sequences:

>Translated_168_residues
MRQTRIYEFWVGLFLLLGMAALVFLGLKVANIQGFSETKSYKIHATFDNIGGLKVRAPLKVGGVVIGRVADITLDAKSYL
PIVTVAIDERYNEIPETSSLSIKTSGLLGEQYIALSIGFDDGEVAMWKEGDKVVDTKSALVLEDLVGQFLYGDRNKNDRQ
EEGEPKAQ
>Mature_168_residues
MRQTRIYEFWVGLFLLLGMAALVFLGLKVANIQGFSETKSYKIHATFDNIGGLKVRAPLKVGGVVIGRVADITLDAKSYL
PIVTVAIDERYNEIPETSSLSIKTSGLLGEQYIALSIGFDDGEVAMWKEGDKVVDTKSALVLEDLVGQFLYGDRNKNDRQ
EEGEPKAQ

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaD family [H]

Homologues:

Organism=Escherichia coli, GI1789584, Length=167, Percent_Identity=57.4850299401198, Blast_Score=197, Evalue=3e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003399 [H]

Pfam domain/function: PF02470 MCE [H]

EC number: NA

Molecular weight: Translated: 18516; Mature: 18516

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQTRIYEFWVGLFLLLGMAALVFLGLKVANIQGFSETKSYKIHATFDNIGGLKVRAPLK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEEEECCCCCEEEECCCE
VGGVVIGRVADITLDAKSYLPIVTVAIDERYNEIPETSSLSIKTSGLLGEQYIALSIGFD
ECCEEEEEEEEEEECCCCCCCEEEEEECCHHHCCCCCCCEEEEECCCCCCEEEEEEEECC
DGEVAMWKEGDKVVDTKSALVLEDLVGQFLYGDRNKNDRQEEGEPKAQ
CCCEEEEECCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRQTRIYEFWVGLFLLLGMAALVFLGLKVANIQGFSETKSYKIHATFDNIGGLKVRAPLK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEEEECCCCCEEEECCCE
VGGVVIGRVADITLDAKSYLPIVTVAIDERYNEIPETSSLSIKTSGLLGEQYIALSIGFD
ECCEEEEEEEEEEECCCCCCCEEEEEECCHHHCCCCCCCEEEEECCCCCCEEEEEEEECC
DGEVAMWKEGDKVVDTKSALVLEDLVGQFLYGDRNKNDRQEEGEPKAQ
CCCEEEEECCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]