Click here to switch to the map view.

The map label for this gene is yrbE [C]

Identifier: 15602040

GI number: 15602040

Start: 199471

End: 200256

Strand: Direct

Name: yrbE [C]

Synonym: PM0175

Alternate gene names: 15602040

Gene position: 199471-200256 (Clockwise)

Preceding gene: 15602039

Following gene: 15602041

Centisome position: 8.84

GC content: 45.67

Gene sequence:

>786_bases
ATGATCCAGTTTATTTCAGAGTTAGGTCATCACGCGATCAGTTCATGTCGTGCCATTGGGCGTGCGGGCTTTATGTTATT
TGGGGCTTTAATTGGTAAACCGCAATGGCGCAAGCATACTCCGTTATTAATTAAGCAACTGCATGTGCTTGGCGTGCAAT
CATTATTGATTATCATGTTGTCAGGGCTTTTCATTGGCATGGTATTGGGATTACAAGGATATGTTGTGTTAGTGGATTTT
TCCGCGGAAACCAGTTTAGGTCAACTCGTCGCGTTATCCTTACTACGTGAATTAGGACCAGTAGTCACGGCTCTTCTTTT
TGCGGGGCGTGCTGGTTCTGCACTGACGGCAGAAATTGGCTTAATGAAAGCGACAGAACAATTATCCAGTTTAGAGATGA
TGGCGGTGGATCCCCTCCGTCGTGTTATTGCTCCGCGCTTTTGGGCGGGCGTGATCGCGATGCCGATTTTAGCGATTATT
TTTACCGCTATTGGCATTTGGGGTGGTTCATTAGTCGGGGTTGACTGGAAAGGTGTTGACGCAGGGAGTTTTTGGTCGGT
GATGCAAAATGCGGTGACATGGGAAAAAGATTTGCTTAATGGCTTTATCAAGAGCCTGTGTTTCGCTATCGCTGTAGTAT
GGATTGCGTTATTTAACGGTTATGACTGTATTCCGACTTCGGAAGGGATTAGTAAAGCGACCACAAGAACTGTGGTCCAT
GCCTCACTGGTTGTGTTGGGATTAGATTTTGTATTAACGGCACTGATGTTTGGTGCGAGTGTATAG

Upstream 100 bases:

>100_bases
AAAGTCAAGATCCGCAAGTACGTCAATTCTTAGACGGCGAAGCCGATGGGCCGGTACGTTTTCATTTCCCCGCGGAAGAT
TATGTGGAGGCGCTTTTTAA

Downstream 100 bases:

>100_bases
GTGAGCGCTTGAATGCGTTGGATGTAAAGGAAATTTTATGCGACAAACAAGAATTTATGAATTTTGGGTAGGTTTGTTTT
TATTATTGGGCATGGCAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MIQFISELGHHAISSCRAIGRAGFMLFGALIGKPQWRKHTPLLIKQLHVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDF
SAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILAII
FTAIGIWGGSLVGVDWKGVDAGSFWSVMQNAVTWEKDLLNGFIKSLCFAIAVVWIALFNGYDCIPTSEGISKATTRTVVH
ASLVVLGLDFVLTALMFGASV

Sequences:

>Translated_261_residues
MIQFISELGHHAISSCRAIGRAGFMLFGALIGKPQWRKHTPLLIKQLHVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDF
SAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILAII
FTAIGIWGGSLVGVDWKGVDAGSFWSVMQNAVTWEKDLLNGFIKSLCFAIAVVWIALFNGYDCIPTSEGISKATTRTVVH
ASLVVLGLDFVLTALMFGASV
>Mature_261_residues
MIQFISELGHHAISSCRAIGRAGFMLFGALIGKPQWRKHTPLLIKQLHVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDF
SAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILAII
FTAIGIWGGSLVGVDWKGVDAGSFWSVMQNAVTWEKDLLNGFIKSLCFAIAVVWIALFNGYDCIPTSEGISKATTRTVVH
ASLVVLGLDFVLTALMFGASV

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=258, Percent_Identity=74.031007751938, Blast_Score=396, Evalue=1e-112,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 27928; Mature: 27928

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQFISELGHHAISSCRAIGRAGFMLFGALIGKPQWRKHTPLLIKQLHVLGVQSLLIIML
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
SGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIG
HHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LMKATEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILAIIFTAIGIWGGSLVGVDWKGVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCC
AGSFWSVMQNAVTWEKDLLNGFIKSLCFAIAVVWIALFNGYDCIPTSEGISKATTRTVVH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
ASLVVLGLDFVLTALMFGASV
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIQFISELGHHAISSCRAIGRAGFMLFGALIGKPQWRKHTPLLIKQLHVLGVQSLLIIML
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
SGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIG
HHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LMKATEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILAIIFTAIGIWGGSLVGVDWKGVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCC
AGSFWSVMQNAVTWEKDLLNGFIKSLCFAIAVVWIALFNGYDCIPTSEGISKATTRTVVH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
ASLVVLGLDFVLTALMFGASV
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]