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The map label for this gene is nrfF_2 [H]

Identifier: 15601895

GI number: 15601895

Start: 26518

End: 27354

Strand: Direct

Name: nrfF_2 [H]

Synonym: PM0030

Alternate gene names: 15601895

Gene position: 26518-27354 (Clockwise)

Preceding gene: 15601894

Following gene: 15601896

Centisome position: 1.17

GC content: 41.94

Gene sequence:

>837_bases
ATGATGGGATGGGGATTAGCACTCTTTGGGTTATTGATTGTGGTGTTCCTGATGTTGCCTTTGGCAAAATGGCAAGCATG
GCAGACACACTATCGCCAACAACAAAATGTGGCACTTTATCGTGCACAAGTAGCAAGACAATCTGATCCCGAATTGGCGA
AAGAGTTAGGACAACGCTTACTAGAAGATGAAAAATTTTTCCAAAATAGACCGCACTTTGAGCAACAGTCAGGTGAAAAA
AGTGAGCGCTTTTCGTTTAAATTTCATCTGTTTTTAATTGTCTTATTGTTGACTGTGCCAACGCTGTATTATTTTTCTTT
GCCACGTTATGCTGCCGTCGAAGTCGGTGAGCAAGCCTTTTTAGCGCAACAAATGCAGTTAATGGAACAAGCCATCTCAC
AGCAACATGAAGATAAAATCACGCAACTTCAGCAAAAATTACGTCAAGATCCTAATCATGCAGAAAATTGGTTATTGCTT
GGGCAAGCTTATCTGGACAATGCCGAAGTAGAGCACGCCTTAATTGCCTATGGCAATGCCCAACAATTATTAGGTGACAA
ACCGGCTATTCTTGGTGCGATAGCAACGGCGTATTATTATCAAGCTGGACAAAAAATGACAGCTAAAGTGGATGCACTAT
TAACACAAGCCTTAACGACCGATCCTTTTGAAACCGCGAGCTTGTCTTTGATTGCCACAGATGCTTTTGTACAAGGAAAT
TATCAGAAAGCCGCACAAACCTGGCAAAAAATGTTAGACTCCGACCGACCGAATGTCGAACGTCGCCTACTGATTCAGCG
AATACAAATGGCGCAATTTAGACAGCAATCCAATTAA

Upstream 100 bases:

>100_bases
AAAAGCGTGAAAAACCGCAGCACACTACCGCGTTAGATCCGGCACAACAAGCGAAATTAACGCAATTACTTAAACAAACG
GAGCACACAGGAAACAAAAA

Downstream 100 bases:

>100_bases
ATAACTTGAAATCAGGTGGGGGGGAACCATGCCTGATTTTATTTAACCGCAATACGGTGATCAAACAAGCTTATGAACAA
CTATTCTGATGTAATTATTC

Product: NrfF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MMGWGLALFGLLIVVFLMLPLAKWQAWQTHYRQQQNVALYRAQVARQSDPELAKELGQRLLEDEKFFQNRPHFEQQSGEK
SERFSFKFHLFLIVLLLTVPTLYYFSLPRYAAVEVGEQAFLAQQMQLMEQAISQQHEDKITQLQQKLRQDPNHAENWLLL
GQAYLDNAEVEHALIAYGNAQQLLGDKPAILGAIATAYYYQAGQKMTAKVDALLTQALTTDPFETASLSLIATDAFVQGN
YQKAAQTWQKMLDSDRPNVERRLLIQRIQMAQFRQQSN

Sequences:

>Translated_278_residues
MMGWGLALFGLLIVVFLMLPLAKWQAWQTHYRQQQNVALYRAQVARQSDPELAKELGQRLLEDEKFFQNRPHFEQQSGEK
SERFSFKFHLFLIVLLLTVPTLYYFSLPRYAAVEVGEQAFLAQQMQLMEQAISQQHEDKITQLQQKLRQDPNHAENWLLL
GQAYLDNAEVEHALIAYGNAQQLLGDKPAILGAIATAYYYQAGQKMTAKVDALLTQALTTDPFETASLSLIATDAFVQGN
YQKAAQTWQKMLDSDRPNVERRLLIQRIQMAQFRQQSN
>Mature_278_residues
MMGWGLALFGLLIVVFLMLPLAKWQAWQTHYRQQQNVALYRAQVARQSDPELAKELGQRLLEDEKFFQNRPHFEQQSGEK
SERFSFKFHLFLIVLLLTVPTLYYFSLPRYAAVEVGEQAFLAQQMQLMEQAISQQHEDKITQLQQKLRQDPNHAENWLLL
GQAYLDNAEVEHALIAYGNAQQLLGDKPAILGAIATAYYYQAGQKMTAKVDALLTQALTTDPFETASLSLIATDAFVQGN
YQKAAQTWQKMLDSDRPNVERRLLIQRIQMAQFRQQSN

Specific function: Possible subunit of a heme lyase [H]

COG id: COG4235

COG function: function code O; Cytochrome c biogenesis factor

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1790513, Length=198, Percent_Identity=36.3636363636364, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005616
- InterPro:   IPR017565
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF03918 CcmH [H]

EC number: NA

Molecular weight: Translated: 31997; Mature: 31997

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMGWGLALFGLLIVVFLMLPLAKWQAWQTHYRQQQNVALYRAQVARQSDPELAKELGQRL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LEDEKFFQNRPHFEQQSGEKSERFSFKFHLFLIVLLLTVPTLYYFSLPRYAAVEVGEQAF
HHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LAQQMQLMEQAISQQHEDKITQLQQKLRQDPNHAENWLLLGQAYLDNAEVEHALIAYGNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEHHHHHCCCHHHHHHHHCCCH
QQLLGDKPAILGAIATAYYYQAGQKMTAKVDALLTQALTTDPFETASLSLIATDAFVQGN
HHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHEEHHHHHCCC
YQKAAQTWQKMLDSDRPNVERRLLIQRIQMAQFRQQSN
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMGWGLALFGLLIVVFLMLPLAKWQAWQTHYRQQQNVALYRAQVARQSDPELAKELGQRL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LEDEKFFQNRPHFEQQSGEKSERFSFKFHLFLIVLLLTVPTLYYFSLPRYAAVEVGEQAF
HHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LAQQMQLMEQAISQQHEDKITQLQQKLRQDPNHAENWLLLGQAYLDNAEVEHALIAYGNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEHHHHHCCCHHHHHHHHCCCH
QQLLGDKPAILGAIATAYYYQAGQKMTAKVDALLTQALTTDPFETASLSLIATDAFVQGN
HHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHEEHHHHHCCC
YQKAAQTWQKMLDSDRPNVERRLLIQRIQMAQFRQQSN
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]