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The map label for this gene is nrfF_1 [H]

Identifier: 15601894

GI number: 15601894

Start: 26036

End: 26521

Strand: Direct

Name: nrfF_1 [H]

Synonym: PM0029

Alternate gene names: 15601894

Gene position: 26036-26521 (Clockwise)

Preceding gene: 15601893

Following gene: 15601895

Centisome position: 1.15

GC content: 44.24

Gene sequence:

>486_bases
ATGCCAAAGTGCGGTAAGTTTTTACTGAGTTTTGTCTTTGTGATCAGTGTCTTTGCGCGGGCGGATATGGTGGATACTTA
CTCATTTAACAGCCCTGAAGAACGGGTTCGTGCAGTGGCGTTAGCAAAGGCGCTGCGTTGTCCACAATGCCAAAATCAAA
ACTTGGTCGAATCCAATTCGCCAATTGCTTATGATTTGCGCATTGAGGTGTACAACATGGTGAACGAAGGAAAAAGCAAT
CAACAAATTATCGACGCGATGACGGCACGTTTTGGTAATTTTGTGTTATATAAGCCCCCGTTTCAGTGGACAACCCTGTT
GTTGTGGCTTTCGCCAATCTTTTTAACTGTGTTAGCGTTTGGTCTCATGTGGCGCTATGCTAAAAAGCGTGAAAAACCGC
AGCACACTACCGCGTTAGATCCGGCACAACAAGCGAAATTAACGCAATTACTTAAACAAACGGAGCACACAGGAAACAAA
AAATGA

Upstream 100 bases:

>100_bases
GATCAATACGGTGTGATTCGTTATCGTTATTCAGGTCCATTAACGCCAGAGGTGTGGCAAGAAATGTTTATCCCAGAATG
GCAAAAATTGGAGGCTGAAA

Downstream 100 bases:

>100_bases
TGGGATGGGGATTAGCACTCTTTGGGTTATTGATTGTGGTGTTCCTGATGTTGCCTTTGGCAAAATGGCAAGCATGGCAG
ACACACTATCGCCAACAACA

Product: NrfF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MPKCGKFLLSFVFVISVFARADMVDTYSFNSPEERVRAVALAKALRCPQCQNQNLVESNSPIAYDLRIEVYNMVNEGKSN
QQIIDAMTARFGNFVLYKPPFQWTTLLLWLSPIFLTVLAFGLMWRYAKKREKPQHTTALDPAQQAKLTQLLKQTEHTGNK
K

Sequences:

>Translated_161_residues
MPKCGKFLLSFVFVISVFARADMVDTYSFNSPEERVRAVALAKALRCPQCQNQNLVESNSPIAYDLRIEVYNMVNEGKSN
QQIIDAMTARFGNFVLYKPPFQWTTLLLWLSPIFLTVLAFGLMWRYAKKREKPQHTTALDPAQQAKLTQLLKQTEHTGNK
K
>Mature_160_residues
PKCGKFLLSFVFVISVFARADMVDTYSFNSPEERVRAVALAKALRCPQCQNQNLVESNSPIAYDLRIEVYNMVNEGKSNQ
QIIDAMTARFGNFVLYKPPFQWTTLLLWLSPIFLTVLAFGLMWRYAKKREKPQHTTALDPAQQAKLTQLLKQTEHTGNKK

Specific function: Possible subunit of a heme lyase [H]

COG id: COG3088

COG function: function code O; Uncharacterized protein involved in biosynthesis of c-type cytochromes

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1790512, Length=90, Percent_Identity=51.1111111111111, Blast_Score=100, Evalue=5e-23,
Organism=Escherichia coli, GI1788522, Length=117, Percent_Identity=40.1709401709402, Blast_Score=97, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005616
- InterPro:   IPR017565
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF03918 CcmH [H]

EC number: NA

Molecular weight: Translated: 18476; Mature: 18345

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKCGKFLLSFVFVISVFARADMVDTYSFNSPEERVRAVALAKALRCPQCQNQNLVESNS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PIAYDLRIEVYNMVNEGKSNQQIIDAMTARFGNFVLYKPPFQWTTLLLWLSPIFLTVLAF
CEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHH
GLMWRYAKKREKPQHTTALDPAQQAKLTQLLKQTEHTGNKK
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PKCGKFLLSFVFVISVFARADMVDTYSFNSPEERVRAVALAKALRCPQCQNQNLVESNS
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PIAYDLRIEVYNMVNEGKSNQQIIDAMTARFGNFVLYKPPFQWTTLLLWLSPIFLTVLAF
CEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHH
GLMWRYAKKREKPQHTTALDPAQQAKLTQLLKQTEHTGNKK
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]