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The map label for this gene is glnR

Identifier: 30024074

GI number: 30024074

Start: 2283711

End: 2284076

Strand: Reverse

Name: glnR

Synonym: L67158

Alternate gene names: 30024074

Gene position: 2284076-2283711 (Counterclockwise)

Preceding gene: 15674184

Following gene: 15674182

Centisome position: 96.55

GC content: 42.35

Gene sequence:

>366_bases
GTGAAAGAACGTGAATTAAGACGCTCTATGGCGGTACTTCCAATAGGAACTGTCATGAAACTCACTGACCTAAGCGCAAG
GCAGATTCGTTATTACGAAGAGCAAGAGCTTATTTTCCCGGAGCGAAGTGACGGTAATCGTCGCATGTATTCGCTCAATG
ACATAGATGCTCTATTTGATATTGCTGACTTATTGCAAGAAGGTAATAATATTGCAGATATCAAAGAAATTTATGCCAAA
AGGGATGCTAAGAAGGCTCAAACTTTATCTATCGGAGAAGTCCACCATGCACTTGAACGCGAATTTGCCCAACAAGGTAG
ATTCGGAACTCCTGATCCCACTCATTTTACCCAACCGCGGATGTAA

Upstream 100 bases:

>100_bases
AATATTTCAAATAAAATAAACCGATGTGAGAAAATCTCACATTAAAACTTGACTTTGCTAATAACAAGGTCTATAATGAA
AGGCATGGAGGCGAGATTTG

Downstream 100 bases:

>100_bases
GTTTAGTTTACTTTATTTGTCAACTAAGTTTACAGCGAAAATTTAACTAGGAGAGTAAAGCATGACAATCACAGCAGCAG
ACATTCGTCGCGACGTCAAA

Product: glutamine synthetase repressor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MKERELRRSMAVLPIGTVMKLTDLSARQIRYYEEQELIFPERSDGNRRMYSLNDIDALFDIADLLQEGNNIADIKEIYAK
RDAKKAQTLSIGEVHHALEREFAQQGRFGTPDPTHFTQPRM

Sequences:

>Translated_121_residues
MKERELRRSMAVLPIGTVMKLTDLSARQIRYYEEQELIFPERSDGNRRMYSLNDIDALFDIADLLQEGNNIADIKEIYAK
RDAKKAQTLSIGEVHHALEREFAQQGRFGTPDPTHFTQPRM
>Mature_121_residues
MKERELRRSMAVLPIGTVMKLTDLSARQIRYYEEQELIFPERSDGNRRMYSLNDIDALFDIADLLQEGNNIADIKEIYAK
RDAKKAQTLSIGEVHHALEREFAQQGRFGTPDPTHFTQPRM

Specific function: Represses many genes including the glnRA operon and tnrA during growth with nitrogen excess [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 14068; Mature: 14068

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKERELRRSMAVLPIGTVMKLTDLSARQIRYYEEQELIFPERSDGNRRMYSLNDIDALFD
CCHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCEEEECHHHHHHHH
IADLLQEGNNIADIKEIYAKRDAKKAQTLSIGEVHHALEREFAQQGRFGTPDPTHFTQPR
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
M
C
>Mature Secondary Structure
MKERELRRSMAVLPIGTVMKLTDLSARQIRYYEEQELIFPERSDGNRRMYSLNDIDALFD
CCHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCEEEECHHHHHHHH
IADLLQEGNNIADIKEIYAKRDAKKAQTLSIGEVHHALEREFAQQGRFGTPDPTHFTQPR
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
M
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2906311; 2573733; 1677938; 9384377 [H]