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The map label for this gene is ywiB

Identifier: 15674178

GI number: 15674178

Start: 2280453

End: 2280941

Strand: Reverse

Name: ywiB

Synonym: L63900

Alternate gene names: 15674178

Gene position: 2280941-2280453 (Counterclockwise)

Preceding gene: 15674180

Following gene: 15674177

Centisome position: 96.42

GC content: 32.92

Gene sequence:

>489_bases
ATGAATAAAGAAGAAAAAATCGAAGGTTATGAGTTGCTTAATTTGCAACTAAAAGCGCTTCTTAGTGAACAAAATTATAC
ACTTTCAAACTTAGCCAATGCAAGTAGTTTACTTTGGAGCTTTTTGCCTGAGCAAGTTTATACAGGTTTCTACCTCTACA
ATGGTGAAAAATTAATTTTAGGGCCATTTCAAGGGTCTGTGTCTTGCGTTGAAATTATAATGGGCAAAGGGGTTTGTGGG
GAATCAGCTCAAAATCGCCAAACCATTATTGTTGAAAATGTAAAGAAACACAAAAATTATATTTCTTGTGACGGTCGAGC
AATGTCTGAAATTGTTGTTCCAATGGTTAAAGATGGTAAATTAGTTGGGGTTCTTGACTTAGACAGTTCAGAAATTGGTT
TTTACGATGAAATCGACCAAAAATATCTTGAAGAATTTGCTAACATTTTATGTGAAATGACTGATTTTAAATTTTTTGAA
GTAGGTTAA

Upstream 100 bases:

>100_bases
TCTTCTAGTTTATTCATGGTTTTTATTATATCAAAACTAATCTAAAATTTGCCTTTAAAAAATGATATAATGGATTATAT
TATTTTTGAGGAGCAACAAG

Downstream 100 bases:

>100_bases
ATCAAAATTTTAAAGGGTATCGGAGAAAAAAATGAGTGAAATAGTAAAAAAATTTATTGCTGACCGTTTTGGGGAAAAAG
AAGGAACATCTGTAAATCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MNKEEKIEGYELLNLQLKALLSEQNYTLSNLANASSLLWSFLPEQVYTGFYLYNGEKLILGPFQGSVSCVEIIMGKGVCG
ESAQNRQTIIVENVKKHKNYISCDGRAMSEIVVPMVKDGKLVGVLDLDSSEIGFYDEIDQKYLEEFANILCEMTDFKFFE
VG

Sequences:

>Translated_162_residues
MNKEEKIEGYELLNLQLKALLSEQNYTLSNLANASSLLWSFLPEQVYTGFYLYNGEKLILGPFQGSVSCVEIIMGKGVCG
ESAQNRQTIIVENVKKHKNYISCDGRAMSEIVVPMVKDGKLVGVLDLDSSEIGFYDEIDQKYLEEFANILCEMTDFKFFE
VG
>Mature_162_residues
MNKEEKIEGYELLNLQLKALLSEQNYTLSNLANASSLLWSFLPEQVYTGFYLYNGEKLILGPFQGSVSCVEIIMGKGVCG
ESAQNRQTIIVENVKKHKNYISCDGRAMSEIVVPMVKDGKLVGVLDLDSSEIGFYDEIDQKYLEEFANILCEMTDFKFFE
VG

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=157, Percent_Identity=38.2165605095541, Blast_Score=117, Evalue=5e-28,
Organism=Saccharomyces cerevisiae, GI6322781, Length=165, Percent_Identity=41.8181818181818, Blast_Score=117, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 18275; Mature: 18275

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKEEKIEGYELLNLQLKALLSEQNYTLSNLANASSLLWSFLPEQVYTGFYLYNGEKLIL
CCCCHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEE
GPFQGSVSCVEIIMGKGVCGESAQNRQTIIVENVKKHKNYISCDGRAMSEIVVPMVKDGK
ECCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECHHHCCCEECCCCCCHHHHHCEEECCCC
LVGVLDLDSSEIGFYDEIDQKYLEEFANILCEMTDFKFFEVG
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECC
>Mature Secondary Structure
MNKEEKIEGYELLNLQLKALLSEQNYTLSNLANASSLLWSFLPEQVYTGFYLYNGEKLIL
CCCCHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEE
GPFQGSVSCVEIIMGKGVCGESAQNRQTIIVENVKKHKNYISCDGRAMSEIVVPMVKDGK
ECCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECHHHCCCEECCCCCCHHHHHCEEECCCC
LVGVLDLDSSEIGFYDEIDQKYLEEFANILCEMTDFKFFEVG
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]