| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is ywiA
Identifier: 15674177
GI number: 15674177
Start: 2279780
End: 2280421
Strand: Reverse
Name: ywiA
Synonym: L63227
Alternate gene names: NA
Gene position: 2280421-2279780 (Counterclockwise)
Preceding gene: 15674178
Following gene: 15674176
Centisome position: 96.4
GC content: 35.51
Gene sequence:
>642_bases ATGAGTGAAATAGTAAAAAAATTTATTGCTGACCGTTTTGGGGAAAAAGAAGGAACATCTGTAAATCCAGGTAATATTGG AGATGTTCGTGAATTTGCGCAAGAATTAGGAAGTTTTCTCTATCAATTACATCGGCTACCAACAACAGATGCAAAGTCAC CTAGTTTTGAAAATGCTTTTGCTGGTTCTGATTTGATTTTCTTTGAAGCTGAGATGATAGAACTTTTGAAAGTCTATCAA AAAGTTGTTCCTGCTGACCTTTTGCAAGAAAAATTTGATTTTGCAGCAAAAACAAAATGGTCCAAGAAACCTGTTTGGGT TTTGGGAGAATTGCTTACGCAAAATTTAAAAGTTACTGACGGAAAGTTAGTTAACGTCAAAATTACTGACAAAGCTGTTA TTGGTGATCCAGCTTTTGATTTAGCAATTGCTTGGACGATTTTTGATGAAAAAGCACGTAAAATATTTTTTGCGGCAACC GAAGCAGATGAGGCAACGATTAATCGAGCGAGAATGTTCGCCCTCAGACAGGCCCTCAGAAATTATCAATCACAAGATAT TGATGAATTGATTCAATCACGTGATGCTTCAACTGAAATTTTAAAAGACTTAAACTATAGTCTTGGGCGAGATTTCTATT GA
Upstream 100 bases:
>100_bases AAATATCTTGAAGAATTTGCTAACATTTTATGTGAAATGACTGATTTTAAATTTTTTGAAGTAGGTTAAATCAAAATTTT AAAGGGTATCGGAGAAAAAA
Downstream 100 bases:
>100_bases AACAAGCGGATATGAAAAGAATACTAAGTAAAAAATTGGAAGAGAAAAATGGCATATCAAGCATTATATAGAAAATATCG AAGTCAAAGATTTGATGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Aminoglycoside 3-Phosphotransferase; Aminoglycoside Phosphotransferase Family Protein; Phosphotransferase; Acetyltransferase; GNAT Family Acetyltransferase
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MSEIVKKFIADRFGEKEGTSVNPGNIGDVREFAQELGSFLYQLHRLPTTDAKSPSFENAFAGSDLIFFEAEMIELLKVYQ KVVPADLLQEKFDFAAKTKWSKKPVWVLGELLTQNLKVTDGKLVNVKITDKAVIGDPAFDLAIAWTIFDEKARKIFFAAT EADEATINRARMFALRQALRNYQSQDIDELIQSRDASTEILKDLNYSLGRDFY
Sequences:
>Translated_213_residues MSEIVKKFIADRFGEKEGTSVNPGNIGDVREFAQELGSFLYQLHRLPTTDAKSPSFENAFAGSDLIFFEAEMIELLKVYQ KVVPADLLQEKFDFAAKTKWSKKPVWVLGELLTQNLKVTDGKLVNVKITDKAVIGDPAFDLAIAWTIFDEKARKIFFAAT EADEATINRARMFALRQALRNYQSQDIDELIQSRDASTEILKDLNYSLGRDFY >Mature_212_residues SEIVKKFIADRFGEKEGTSVNPGNIGDVREFAQELGSFLYQLHRLPTTDAKSPSFENAFAGSDLIFFEAEMIELLKVYQK VVPADLLQEKFDFAAKTKWSKKPVWVLGELLTQNLKVTDGKLVNVKITDKAVIGDPAFDLAIAWTIFDEKARKIFFAATE ADEATINRARMFALRQALRNYQSQDIDELIQSRDASTEILKDLNYSLGRDFY
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24173; Mature: 24042
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIVKKFIADRFGEKEGTSVNPGNIGDVREFAQELGSFLYQLHRLPTTDAKSPSFENAF CHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC AGSDLIFFEAEMIELLKVYQKVVPADLLQEKFDFAAKTKWSKKPVWVLGELLTQNLKVTD CCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEECC GKLVNVKITDKAVIGDPAFDLAIAWTIFDEKARKIFFAATEADEATINRARMFALRQALR CEEEEEEEECCEEECCCHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHH NYQSQDIDELIQSRDASTEILKDLNYSLGRDFY HHCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure SEIVKKFIADRFGEKEGTSVNPGNIGDVREFAQELGSFLYQLHRLPTTDAKSPSFENAF HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC AGSDLIFFEAEMIELLKVYQKVVPADLLQEKFDFAAKTKWSKKPVWVLGELLTQNLKVTD CCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEECC GKLVNVKITDKAVIGDPAFDLAIAWTIFDEKARKIFFAATEADEATINRARMFALRQALR CEEEEEEEECCEEECCCHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHH NYQSQDIDELIQSRDASTEILKDLNYSLGRDFY HHCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA