| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is ps301
Identifier: 15673914
GI number: 15673914
Start: 2013685
End: 2014605
Strand: Reverse
Name: ps301
Synonym: L197116
Alternate gene names: NA
Gene position: 2014605-2013685 (Counterclockwise)
Preceding gene: 15673915
Following gene: 15673911
Centisome position: 85.16
GC content: 30.94
Gene sequence:
>921_bases ATGGCAAAAATAAAAAAAGATTATAAACAAATTTTTACAATCCGGGGAGAAGAATTTGAGGTCACTGCACCGGCCTTATT TGATGATTCAACAAATGAACTTCTCTATGATGAGGAACTTGACGATAAAGCGATTGAAATGGCAAACGACCTTTATCGTG AAGCTCACGGATTTGTCTATCCTAGTGAAATAAAAAAGTTTAGAGAAAAATTAAGTATAAGTGGTCGAGATTTGGCTGCT TTGATTGGGTTTAGTCCGACAACTATTGTTATGTATGAAAATGGTGCACTACCTACTGAGAGTAATAGCCGTAAACTTAA AGATTTAATTAATAATAAGAATTCATTTAAAAATTTTTACGAGGCGAATAAATCAAGTTTGGGAGAACCAGCTCAAAAGA AAATTGAAGATTATTTAAATGATGAAAACGACCTCTTAGAAACAATACCGATAATGAAAATTGTAGACTGGTTTCGAATC AAGAATATAATTCTTCAAAAGTCTGATGAATATGTCGAAGATTTAACTCAAATGAAAGTTATGAAGCTTGTATATTACGC ACAAGCTGTATCTCTACATTGGTATGGAAAACCTCTGTTTTCAAATCCTATCTTGGCTTGGAAACATGGACCAGTAGTTC AAGAAATTTATAATGAGTATCATGGTAGTTATTCAATTGTAGAGGATTTGAGGTCTGAAATACCAGAAGAGTTATTGAAA AATTATAATGAACTGTCTGTAAATAAGAAGATGAGTAAAGTTCTAAATTTTGTCCAAGAACAATTAGGAAGTTATTCAGC ATGGACCTTGAGAGACAAGACACACAATGAGGAACCATGGATTAATACTATACAAAGTAGTGTAATTTCAAATAAATCTA TAAAAAAATATTTTGATGATAATTTTGAAAATATATTTTAA
Upstream 100 bases:
>100_bases ATGATGGAATTCGCTATTATATTAAATTTAAATTTATTAATAGTAATACGACCGTCAAATTTATTTCGTTTCATGAAGCG GAATTTTAAGGAGATTTATC
Downstream 100 bases:
>100_bases ACTTATTTCGCCCTCCGGGGCGTTTTTCTTTGTTCTCGTTAAGAAGTTTGCTATAATTAAATTTCTAACACTGACACCCC TTAATCGGGGGTCTTTTTTG
Product: prophage ps3 protein 01
Products: NA
Alternate protein names: Prophage Ps3 Protein; Prophage Protein; Phage Associated Protein; Phage Cro/CI Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Xin-Antitoxin System Antitoxin Component Xre Family; Phage-Related Infection Protein; Phage-Associated Protein-Like Protein; Prophage Ps3 ; Transcriptional Regulator XRE Family; Helix-Turn-Helix Domain Protein; Phage-Associated Protein Family Protein; Transcriptional Regulator Phage-Related
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MAKIKKDYKQIFTIRGEEFEVTAPALFDDSTNELLYDEELDDKAIEMANDLYREAHGFVYPSEIKKFREKLSISGRDLAA LIGFSPTTIVMYENGALPTESNSRKLKDLINNKNSFKNFYEANKSSLGEPAQKKIEDYLNDENDLLETIPIMKIVDWFRI KNIILQKSDEYVEDLTQMKVMKLVYYAQAVSLHWYGKPLFSNPILAWKHGPVVQEIYNEYHGSYSIVEDLRSEIPEELLK NYNELSVNKKMSKVLNFVQEQLGSYSAWTLRDKTHNEEPWINTIQSSVISNKSIKKYFDDNFENIF
Sequences:
>Translated_306_residues MAKIKKDYKQIFTIRGEEFEVTAPALFDDSTNELLYDEELDDKAIEMANDLYREAHGFVYPSEIKKFREKLSISGRDLAA LIGFSPTTIVMYENGALPTESNSRKLKDLINNKNSFKNFYEANKSSLGEPAQKKIEDYLNDENDLLETIPIMKIVDWFRI KNIILQKSDEYVEDLTQMKVMKLVYYAQAVSLHWYGKPLFSNPILAWKHGPVVQEIYNEYHGSYSIVEDLRSEIPEELLK NYNELSVNKKMSKVLNFVQEQLGSYSAWTLRDKTHNEEPWINTIQSSVISNKSIKKYFDDNFENIF >Mature_305_residues AKIKKDYKQIFTIRGEEFEVTAPALFDDSTNELLYDEELDDKAIEMANDLYREAHGFVYPSEIKKFREKLSISGRDLAAL IGFSPTTIVMYENGALPTESNSRKLKDLINNKNSFKNFYEANKSSLGEPAQKKIEDYLNDENDLLETIPIMKIVDWFRIK NIILQKSDEYVEDLTQMKVMKLVYYAQAVSLHWYGKPLFSNPILAWKHGPVVQEIYNEYHGSYSIVEDLRSEIPEELLKN YNELSVNKKMSKVLNFVQEQLGSYSAWTLRDKTHNEEPWINTIQSSVISNKSIKKYFDDNFENIF
Specific function: Unknown
COG id: COG3600
COG function: function code S; Uncharacterized phage-associated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35712; Mature: 35581
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKIKKDYKQIFTIRGEEFEVTAPALFDDSTNELLYDEELDDKAIEMANDLYREAHGFVY CCCHHHHHHHHHHHCCCCEEEECCHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCC PSEIKKFREKLSISGRDLAALIGFSPTTIVMYENGALPTESNSRKLKDLINNKNSFKNFY HHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCHHHHHHHH EANKSSLGEPAQKKIEDYLNDENDLLETIPIMKIVDWFRIKNIILQKSDEYVEDLTQMKV HHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH MKLVYYAQAVSLHWYGKPLFSNPILAWKHGPVVQEIYNEYHGSYSIVEDLRSEIPEELLK HHHHHHHHHHHHEECCCCHHCCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH NYNELSVNKKMSKVLNFVQEQLGSYSAWTLRDKTHNEEPWINTIQSSVISNKSIKKYFDD HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHCC NFENIF CHHCCC >Mature Secondary Structure AKIKKDYKQIFTIRGEEFEVTAPALFDDSTNELLYDEELDDKAIEMANDLYREAHGFVY CCHHHHHHHHHHHCCCCEEEECCHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCC PSEIKKFREKLSISGRDLAALIGFSPTTIVMYENGALPTESNSRKLKDLINNKNSFKNFY HHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCHHHHHHHH EANKSSLGEPAQKKIEDYLNDENDLLETIPIMKIVDWFRIKNIILQKSDEYVEDLTQMKV HHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH MKLVYYAQAVSLHWYGKPLFSNPILAWKHGPVVQEIYNEYHGSYSIVEDLRSEIPEELLK HHHHHHHHHHHHEECCCCHHCCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH NYNELSVNKKMSKVLNFVQEQLGSYSAWTLRDKTHNEEPWINTIQSSVISNKSIKKYFDD HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHCC NFENIF CHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA