| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is nah
Identifier: 15673897
GI number: 15673897
Start: 1992968
End: 1994107
Strand: Reverse
Name: nah
Synonym: L176399
Alternate gene names: 15673897
Gene position: 1994107-1992968 (Counterclockwise)
Preceding gene: 15673898
Following gene: 15673896
Centisome position: 84.3
GC content: 35.09
Gene sequence:
>1140_bases ATGAATGATATTTTACAACTCACAATTGTTTTAATTGCCTCTTTAATTGCTACTCTTGTTTCAAGACGCCTTAAAATTCC AGCTGTCGTTGGACAAATGCTTGTTGGGATTTTGATTGCTCCATCAGTTTTAGGCTTGGTTCATAGCGGTCATGTTCTAG AAGTGATGTCTGAGATTGGAGTTATCTTACTCATGTTCTTAGCAGGAATTGAGAGTGATTTAACTGTTCTAAAGAAAAAT TTTAAAGCATCAATGCTCGTTGCAGTTGGTGGTGTAATTGTGCCATTAATTGCCTTTGGACTTGTTGCTTTTGGCTTTGG TTACGGAATATCGACCAGTTTCTTTTATGGAATTGTTTTCGCTGCGACCTCAGTGTCGATTACGGTTGAAGTCTTACAAG AATATGGTAAACTCAGTACACGTGCAGGTTCGATTATTCTAGGAGCAGCAGTTGTTGATGATATTTTAGCTGTATTGATT TTATCAATTTTTACTAGTTTTAAAAATGGTGGTTCTGGTTCTCATCTTTTCATCCAATTTTTGCTTGAACTTCTCTTTTT TGCCTTTTTATTTCTTGTGCATAAGCTTATTCCAAGATTTTGGAAATTCGTCCAAAAACTACCCATTGCCAACAAAAATA CGATTGTTGCCTTGATTATTTGTTTGGGCTTAAGTCTACTTGCTGATAGCGTAGGAATGTCAGCGGTAATAGGTAGTTTC TTTGCAGGACTTGCTATTTCACAAACAGAAGTAAGTCATAAGATTGAAGAATATACTTCAGCAATCGGTTATGTTATTTT TATCCCAGTATTCTTTGTACTTATCGCCATATCTGTTCAATTCGATAGTTTAATTCATCATCCTTGGATAATTTTACTCT TTACCTTCTTAGCAATTTTGACAAAATTTATCCCCGCCTATTTTGTTGGAAAAGCAAGTAAATTAAGTACTGGTGAGAGT ATGTTGATTGGAACAGGAATGATTTCACGAGGAGAAATGGCCCTGATTGTGGCTCAAATTGGTCTGACGAGTGCCATTAT TACAGATGAAGTTTATTCGGAGCTGGTTATCGTGATTATTTTAGCAACTGTATTAGCACCATTTTTAATTAAAATGGTCT TGAAAAAATATGATAATTAA
Upstream 100 bases:
>100_bases GACTGAAGAAGCAAGCAAACGACTCGTAGAAACATTCAAAATTTAAGGATTTTAGTCGAAAATGTGTTTTTAAGAATGAA AAATATGTTAAAATCAACTT
Downstream 100 bases:
>100_bases GAAAAAATAAAGAATAAAAGACGAAAAATTTAAATTTTTTTAAATTTCATCTTATTCCTCCCAAAAAGACCAAAAAAGTG GTAAAATAGAAAAAATGCTT
Product: Na+/H+ antiporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MNDILQLTIVLIASLIATLVSRRLKIPAVVGQMLVGILIAPSVLGLVHSGHVLEVMSEIGVILLMFLAGIESDLTVLKKN FKASMLVAVGGVIVPLIAFGLVAFGFGYGISTSFFYGIVFAATSVSITVEVLQEYGKLSTRAGSIILGAAVVDDILAVLI LSIFTSFKNGGSGSHLFIQFLLELLFFAFLFLVHKLIPRFWKFVQKLPIANKNTIVALIICLGLSLLADSVGMSAVIGSF FAGLAISQTEVSHKIEEYTSAIGYVIFIPVFFVLIAISVQFDSLIHHPWIILLFTFLAILTKFIPAYFVGKASKLSTGES MLIGTGMISRGEMALIVAQIGLTSAIITDEVYSELVIVIILATVLAPFLIKMVLKKYDN
Sequences:
>Translated_379_residues MNDILQLTIVLIASLIATLVSRRLKIPAVVGQMLVGILIAPSVLGLVHSGHVLEVMSEIGVILLMFLAGIESDLTVLKKN FKASMLVAVGGVIVPLIAFGLVAFGFGYGISTSFFYGIVFAATSVSITVEVLQEYGKLSTRAGSIILGAAVVDDILAVLI LSIFTSFKNGGSGSHLFIQFLLELLFFAFLFLVHKLIPRFWKFVQKLPIANKNTIVALIICLGLSLLADSVGMSAVIGSF FAGLAISQTEVSHKIEEYTSAIGYVIFIPVFFVLIAISVQFDSLIHHPWIILLFTFLAILTKFIPAYFVGKASKLSTGES MLIGTGMISRGEMALIVAQIGLTSAIITDEVYSELVIVIILATVLAPFLIKMVLKKYDN >Mature_379_residues MNDILQLTIVLIASLIATLVSRRLKIPAVVGQMLVGILIAPSVLGLVHSGHVLEVMSEIGVILLMFLAGIESDLTVLKKN FKASMLVAVGGVIVPLIAFGLVAFGFGYGISTSFFYGIVFAATSVSITVEVLQEYGKLSTRAGSIILGAAVVDDILAVLI LSIFTSFKNGGSGSHLFIQFLLELLFFAFLFLVHKLIPRFWKFVQKLPIANKNTIVALIICLGLSLLADSVGMSAVIGSF FAGLAISQTEVSHKIEEYTSAIGYVIFIPVFFVLIAISVQFDSLIHHPWIILLFTFLAILTKFIPAYFVGKASKLSTGES MLIGTGMISRGEMALIVAQIGLTSAIITDEVYSELVIVIILATVLAPFLIKMVLKKYDN
Specific function: This is a Na(+)/H(+) antiporter. It can mediate sodium uptake when a transmembrane pH gradient is applied [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family [H]
Homologues:
Organism=Escherichia coli, GI1786685, Length=389, Percent_Identity=24.6786632390745, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1789749, Length=366, Percent_Identity=20.4918032786885, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1786232, Length=365, Percent_Identity=24.1095890410959, Blast_Score=75, Evalue=6e-15, Organism=Saccharomyces cerevisiae, GI6322367, Length=409, Percent_Identity=24.4498777506112, Blast_Score=96, Evalue=7e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 40809; Mature: 40809
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: PS00307 LECTIN_LEGUME_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDILQLTIVLIASLIATLVSRRLKIPAVVGQMLVGILIAPSVLGLVHSGHVLEVMSEIG CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VILLMFLAGIESDLTVLKKNFKASMLVAVGGVIVPLIAFGLVAFGFGYGISTSFFYGIVF HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AATSVSITVEVLQEYGKLSTRAGSIILGAAVVDDILAVLILSIFTSFKNGGSGSHLFIQF HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LLELLFFAFLFLVHKLIPRFWKFVQKLPIANKNTIVALIICLGLSLLADSVGMSAVIGSF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FAGLAISQTEVSHKIEEYTSAIGYVIFIPVFFVLIAISVQFDSLIHHPWIILLFTFLAIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TKFIPAYFVGKASKLSTGESMLIGTGMISRGEMALIVAQIGLTSAIITDEVYSELVIVII HHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LATVLAPFLIKMVLKKYDN HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNDILQLTIVLIASLIATLVSRRLKIPAVVGQMLVGILIAPSVLGLVHSGHVLEVMSEIG CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VILLMFLAGIESDLTVLKKNFKASMLVAVGGVIVPLIAFGLVAFGFGYGISTSFFYGIVF HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AATSVSITVEVLQEYGKLSTRAGSIILGAAVVDDILAVLILSIFTSFKNGGSGSHLFIQF HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LLELLFFAFLFLVHKLIPRFWKFVQKLPIANKNTIVALIICLGLSLLADSVGMSAVIGSF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FAGLAISQTEVSHKIEEYTSAIGYVIFIPVFFVLIAISVQFDSLIHHPWIILLFTFLAIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TKFIPAYFVGKASKLSTGESMLIGTGMISRGEMALIVAQIGLTSAIITDEVYSELVIVII HHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LATVLAPFLIKMVLKKYDN HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1312090; 1325937 [H]