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The map label for this gene is yrfA

Identifier: 15673676

GI number: 15673676

Start: 1750127

End: 1750429

Strand: Direct

Name: yrfA

Synonym: L133446

Alternate gene names: 15673676

Gene position: 1750127-1750429 (Clockwise)

Preceding gene: 30024052

Following gene: 15673677

Centisome position: 73.98

GC content: 29.37

Gene sequence:

>303_bases
ATGGAAAATGTGGAAACTTTTAAAACCCTATCAAATGAATATCGATTGAAGATTCTTACTTTACTCAAAGAACCAAAAAA
ACATTTCTACAACGAAACTAAAGTAGATGAAGTTGAAACGGGTGTTTGTGTAGGTGAAATCCAAAAATTACTGAACTTAA
CTCAGTCTACTACTTCTCATTATTTATCTATGTTAGAAAAAGACAATTTATTAATTGCTACTCGCATTGGTAAATGGACC
TATTATCGTCGAAATGAGGAGATGATTTCCGATTTTAAAAATTTCATATTAGAAGAGTTATAA

Upstream 100 bases:

>100_bases
TAAATAATAAAAAAGAGAAGTTATTAGTAACTTCTTTTTTTATTTTGTTTAAAATAATCTTTTAAATTGACACATCGTAT
TTTTTAGATATAATAGATTT

Downstream 100 bases:

>100_bases
TTAACTTTCTTTTTACTTCTTCATATCGATATTTCTCGAATTATAGTTTTAATAATCTACTTTCCAAATATAATAATAAC
AGGATAAAAATATGCCAAAT

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MENVETFKTLSNEYRLKILTLLKEPKKHFYNETKVDEVETGVCVGEIQKLLNLTQSTTSHYLSMLEKDNLLIATRIGKWT
YYRRNEEMISDFKNFILEEL

Sequences:

>Translated_100_residues
MENVETFKTLSNEYRLKILTLLKEPKKHFYNETKVDEVETGVCVGEIQKLLNLTQSTTSHYLSMLEKDNLLIATRIGKWT
YYRRNEEMISDFKNFILEEL
>Mature_100_residues
MENVETFKTLSNEYRLKILTLLKEPKKHFYNETKVDEVETGVCVGEIQKLLNLTQSTTSHYLSMLEKDNLLIATRIGKWT
YYRRNEEMISDFKNFILEEL

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 11910; Mature: 11910

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENVETFKTLSNEYRLKILTLLKEPKKHFYNETKVDEVETGVCVGEIQKLLNLTQSTTSH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH
YLSMLEKDNLLIATRIGKWTYYRRNEEMISDFKNFILEEL
HHHHHHCCCEEEEEECCCCCEEECCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MENVETFKTLSNEYRLKILTLLKEPKKHFYNETKVDEVETGVCVGEIQKLLNLTQSTTSH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH
YLSMLEKDNLLIATRIGKWTYYRRNEEMISDFKNFILEEL
HHHHHHCCCEEEEEECCCCCEEECCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]