| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is pepQ
Identifier: 15673631
GI number: 15673631
Start: 1697143
End: 1698231
Strand: Direct
Name: pepQ
Synonym: L96847
Alternate gene names: 15673631
Gene position: 1697143-1698231 (Clockwise)
Preceding gene: 15673615
Following gene: 15673639
Centisome position: 71.74
GC content: 37.74
Gene sequence:
>1089_bases TTGAGCAAAATTGAACGTATTTCAGCTTTTCTGAATGACAAGGAAGTCGATATGACTTTCATCACTAATCCGACAACTCT AAATTATCTAACAGGGCTAGCAATTGATCCCCATGAACGAATTGCTGGGCTGATGATTTTTAGAGATTCAACTCCGATGT TATTTACTCCTGCTTTGGAAGTGGAAAAAGCTAAAGAATACACAAGTGGTCTGGATATTTTCGGATATGAAGATTCTCAA AACCCTTGGGAAGTTGTTAAAAATCATGTAAAATCAGATGTTAAATCAATTGCTGTTGAATTTTCAGATATTCCTTTAGC TAAAACTGAAGGGTTGAAAGCACAATTTGGTGATATTAATTTTGTAAATTTGACTCCTTTGATTGAACGGATGCGTTTGA TTAAGTCAGCAGATGAAATTGAAAAAATGAAAGTTGCTGGTGATTTTGCTGACAAGTGTTTTGAAATTGGTTTTGCCACT GCTGCTGAACGTAATGGTGTGACTGAATCTGATATCGTTGCAAAAATTGAATACGAAATGAAACGTATGGGTGTTCCACA GATGTCATTTGACACGCTTGTTTTATCAGGAGCTCGCGCTGCTAATCCACATGGTGCACCTGAAAATGTTGAAATTCAAG AAAATAAACTTTTGCTCTTTGACTTGGGTGTGATGAGTGGCGGATATGCTTCTGATGCGACACGTACAATCGCTATTGGT CAACCTAATGACTTTGATGCTGAGATCCATAAAATCGTTAAGGAAGCTCAACAAGCAGCCATGGACTTCATTAAACCTGG TGTAACTGCACATGAAGTTGATGCTGTTGCTCGTGATTTAATTACTAAAGCAGGATATGGTGAATATTTCAATCACCGCC TTGGACATGGTATCGGAATGGACGTTCACGAATATCCATCTATTGTTGCCGGAAATGACCTCGTAATTCAAGAAGGAATG TGCTTCTCTAACGAACCTGGAATTTATATTCCTGGTAAAGTAGGTGTGCGTATTGAAGACTGTCTTTACGTAACAGAAAA TGGTTGTGAAAGCTTCACTCATACTGACCATGACTTATTAATTTTCTAA
Upstream 100 bases:
>100_bases GTGATTTTTTAATAAAAATAGCGTAGAATAGGGAATATAGTGTTTTTTATTTTCATGAGAATTTAAGAAACTCATTTTCA TAAATATTGGAGGAACCATT
Downstream 100 bases:
>100_bases TCGAATAATTGATAAAAGTAAAAAACTTTCGCTGATTTTGGCGAAAGTTTTTTTGTCAGTAAATTTTTGTCAGTAAGTTT CTGTCAGTAAAAAAAATAAT
Product: proline dipeptidase
Products: NA
Alternate protein names: X-Pro dipeptidase; Imidodipeptidase; Proline dipeptidase; Prolidase [H]
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MSKIERISAFLNDKEVDMTFITNPTTLNYLTGLAIDPHERIAGLMIFRDSTPMLFTPALEVEKAKEYTSGLDIFGYEDSQ NPWEVVKNHVKSDVKSIAVEFSDIPLAKTEGLKAQFGDINFVNLTPLIERMRLIKSADEIEKMKVAGDFADKCFEIGFAT AAERNGVTESDIVAKIEYEMKRMGVPQMSFDTLVLSGARAANPHGAPENVEIQENKLLLFDLGVMSGGYASDATRTIAIG QPNDFDAEIHKIVKEAQQAAMDFIKPGVTAHEVDAVARDLITKAGYGEYFNHRLGHGIGMDVHEYPSIVAGNDLVIQEGM CFSNEPGIYIPGKVGVRIEDCLYVTENGCESFTHTDHDLLIF
Sequences:
>Translated_362_residues MSKIERISAFLNDKEVDMTFITNPTTLNYLTGLAIDPHERIAGLMIFRDSTPMLFTPALEVEKAKEYTSGLDIFGYEDSQ NPWEVVKNHVKSDVKSIAVEFSDIPLAKTEGLKAQFGDINFVNLTPLIERMRLIKSADEIEKMKVAGDFADKCFEIGFAT AAERNGVTESDIVAKIEYEMKRMGVPQMSFDTLVLSGARAANPHGAPENVEIQENKLLLFDLGVMSGGYASDATRTIAIG QPNDFDAEIHKIVKEAQQAAMDFIKPGVTAHEVDAVARDLITKAGYGEYFNHRLGHGIGMDVHEYPSIVAGNDLVIQEGM CFSNEPGIYIPGKVGVRIEDCLYVTENGCESFTHTDHDLLIF >Mature_361_residues SKIERISAFLNDKEVDMTFITNPTTLNYLTGLAIDPHERIAGLMIFRDSTPMLFTPALEVEKAKEYTSGLDIFGYEDSQN PWEVVKNHVKSDVKSIAVEFSDIPLAKTEGLKAQFGDINFVNLTPLIERMRLIKSADEIEKMKVAGDFADKCFEIGFATA AERNGVTESDIVAKIEYEMKRMGVPQMSFDTLVLSGARAANPHGAPENVEIQENKLLLFDLGVMSGGYASDATRTIAIGQ PNDFDAEIHKIVKEAQQAAMDFIKPGVTAHEVDAVARDLITKAGYGEYFNHRLGHGIGMDVHEYPSIVAGNDLVIQEGMC FSNEPGIYIPGKVGVRIEDCLYVTENGCESFTHTDHDLLIF
Specific function: Unknown
COG id: COG0006
COG function: function code E; Xaa-Pro aminopeptidase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24B family [H]
Homologues:
Organism=Homo sapiens, GI11559925, Length=251, Percent_Identity=31.8725099601594, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI93141226, Length=164, Percent_Identity=34.1463414634146, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI264681563, Length=191, Percent_Identity=29.8429319371728, Blast_Score=74, Evalue=3e-13, Organism=Escherichia coli, GI1788728, Length=289, Percent_Identity=34.9480968858132, Blast_Score=176, Evalue=3e-45, Organism=Escherichia coli, GI1789275, Length=262, Percent_Identity=28.6259541984733, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1786364, Length=263, Percent_Identity=24.3346007604563, Blast_Score=73, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17509539, Length=250, Percent_Identity=27.2, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71989583, Length=261, Percent_Identity=24.904214559387, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6321118, Length=295, Percent_Identity=26.1016949152542, Blast_Score=74, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6320922, Length=254, Percent_Identity=23.2283464566929, Blast_Score=71, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6322999, Length=173, Percent_Identity=32.9479768786127, Blast_Score=67, Evalue=4e-12, Organism=Drosophila melanogaster, GI19920384, Length=255, Percent_Identity=28.2352941176471, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI17137632, Length=375, Percent_Identity=25.3333333333333, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI21355531, Length=242, Percent_Identity=25.6198347107438, Blast_Score=68, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000587 - InterPro: IPR000994 - InterPro: IPR001131 [H]
Pfam domain/function: PF01321 Creatinase_N; PF00557 Peptidase_M24 [H]
EC number: =3.4.13.9 [H]
Molecular weight: Translated: 39996; Mature: 39865
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS00491 PROLINE_PEPTIDASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIERISAFLNDKEVDMTFITNPTTLNYLTGLAIDPHERIAGLMIFRDSTPMLFTPALE CCHHHHHHHHHCCCCEEEEEEECCCEEHHHCCCEECHHHHHEEEEEEECCCCEEEECCHH VEKAKEYTSGLDIFGYEDSQNPWEVVKNHVKSDVKSIAVEFSDIPLAKTEGLKAQFGDIN HHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCEE FVNLTPLIERMRLIKSADEIEKMKVAGDFADKCFEIGFATAAERNGVTESDIVAKIEYEM EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH KRMGVPQMSFDTLVLSGARAANPHGAPENVEIQENKLLLFDLGVMSGGYASDATRTIAIG HHCCCCCCCCCHHEEECCCCCCCCCCCCCCEEECCEEEEEEECCCCCCCCCCCCEEEEEC QPNDFDAEIHKIVKEAQQAAMDFIKPGVTAHEVDAVARDLITKAGYGEYFNHRLGHGIGM CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCC DVHEYPSIVAGNDLVIQEGMCFSNEPGIYIPGKVGVRIEDCLYVTENGCESFTHTDHDLL CHHHCCCEECCCCEEEECCCCCCCCCCEEECCCCCEEEEEEEEEECCCCCCCCCCCCCEE IF EC >Mature Secondary Structure SKIERISAFLNDKEVDMTFITNPTTLNYLTGLAIDPHERIAGLMIFRDSTPMLFTPALE CHHHHHHHHHCCCCEEEEEEECCCEEHHHCCCEECHHHHHEEEEEEECCCCEEEECCHH VEKAKEYTSGLDIFGYEDSQNPWEVVKNHVKSDVKSIAVEFSDIPLAKTEGLKAQFGDIN HHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCEE FVNLTPLIERMRLIKSADEIEKMKVAGDFADKCFEIGFATAAERNGVTESDIVAKIEYEM EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH KRMGVPQMSFDTLVLSGARAANPHGAPENVEIQENKLLLFDLGVMSGGYASDATRTIAIG HHCCCCCCCCCHHEEECCCCCCCCCCCCCCEEECCEEEEEEECCCCCCCCCCCCEEEEEC QPNDFDAEIHKIVKEAQQAAMDFIKPGVTAHEVDAVARDLITKAGYGEYFNHRLGHGIGM CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCC DVHEYPSIVAGNDLVIQEGMCFSNEPGIYIPGKVGVRIEDCLYVTENGCESFTHTDHDLL CHHHCCCEECCCCEEEECCCCCCCCCCEEECCCCCEEEEEEEEEECCCCCCCCCCCCCEE IF EC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA