| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is hisA
Identifier: 15673195
GI number: 15673195
Start: 1235496
End: 1236215
Strand: Direct
Name: hisA
Synonym: L0070
Alternate gene names: 15673195
Gene position: 1235496-1236215 (Clockwise)
Preceding gene: 15673194
Following gene: 15673196
Centisome position: 52.23
GC content: 34.58
Gene sequence:
>720_bases ATGAAGATTATTCCAGCAATTGATTTGCAAAATGGTGAAGCCGTGCGTCTCTACAAAGGAGATTATGATAAGAAAACGGT CTATTCAAAAACTCCCCTTGAAATTGCTCAAAAATTTGAAAGAATGGGAGCGACTGACCTCCATTTGGTTGATTTAGATG ATGCTAACATAGGACAAACTCGTAATTTAGAGATTGTGCGAAAAATAAAAGAGGAAACAAGATTGAAAATCGAAATTGGT GGTGGAATTAGAGATTTCGATACTGTTAGAATGTATCTTGAACAAATTGGTGTGGAACGAGTGATTTTAGGAACCGCAGC GGTAGAAAAACCTGATTTTCTTAAGGAGTTATTAATTAAATATGGTCCAAGCAAAATCATTGTTGGGGTAGATATTAGAG AGGGTTTTGTATCAACAAGTGGTTGGTTAGAAAAAACAAGTCTTCCTTACCTGTCATTTTTAAAAAAATTAGAGAGAATA GGGGTTAAAACCACTATTATTACTGATATCTCCAAAGACGGAACACTGACAGGTCCAAATTTTAAACTTTATGATGAAAT TTCAAAGGAAAGTTCCCTAAACGTGATTATTTCTGGAGGTGTAAAGGATAATTCTGATATTCAACGTGCAACTCGTTCTG ACTTCTATGGAATTATCGTTGGGAAAGCTTACTATGAGAAGAAAATTAATCTTGAAAAGGAGTTCAGGAATGCTAACTAA
Upstream 100 bases:
>100_bases AATTGTTGGAAAAAATAATGTGATAGGCTGTCAATTTCACCCTGAAAAGAGTGGAGAAATTGGCAGAAAGGTACTAAAAG CATTCTTGGAGGAAATTTAA
Downstream 100 bases:
>100_bases AAGAATCATCCCTTGTCTTGATATTAAAAATGGTAAGGTTGTTAAAGGAATTAATTTTGTGAGTTTAAGAGAAATAGGTG ATTCCGTGGAATTGGCCAAA
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [H]
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MKIIPAIDLQNGEAVRLYKGDYDKKTVYSKTPLEIAQKFERMGATDLHLVDLDDANIGQTRNLEIVRKIKEETRLKIEIG GGIRDFDTVRMYLEQIGVERVILGTAAVEKPDFLKELLIKYGPSKIIVGVDIREGFVSTSGWLEKTSLPYLSFLKKLERI GVKTTIITDISKDGTLTGPNFKLYDEISKESSLNVIISGGVKDNSDIQRATRSDFYGIIVGKAYYEKKINLEKEFRNAN
Sequences:
>Translated_239_residues MKIIPAIDLQNGEAVRLYKGDYDKKTVYSKTPLEIAQKFERMGATDLHLVDLDDANIGQTRNLEIVRKIKEETRLKIEIG GGIRDFDTVRMYLEQIGVERVILGTAAVEKPDFLKELLIKYGPSKIIVGVDIREGFVSTSGWLEKTSLPYLSFLKKLERI GVKTTIITDISKDGTLTGPNFKLYDEISKESSLNVIISGGVKDNSDIQRATRSDFYGIIVGKAYYEKKINLEKEFRNAN >Mature_239_residues MKIIPAIDLQNGEAVRLYKGDYDKKTVYSKTPLEIAQKFERMGATDLHLVDLDDANIGQTRNLEIVRKIKEETRLKIEIG GGIRDFDTVRMYLEQIGVERVILGTAAVEKPDFLKELLIKYGPSKIIVGVDIREGFVSTSGWLEKTSLPYLSFLKKLERI GVKTTIITDISKDGTLTGPNFKLYDEISKESSLNVIISGGVKDNSDIQRATRSDFYGIIVGKAYYEKKINLEKEFRNAN
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family [H]
Homologues:
Organism=Escherichia coli, GI87082028, Length=245, Percent_Identity=33.469387755102, Blast_Score=141, Evalue=4e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 [H]
Pfam domain/function: PF00977 His_biosynth [H]
EC number: =5.3.1.16 [H]
Molecular weight: Translated: 26971; Mature: 26971
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIPAIDLQNGEAVRLYKGDYDKKTVYSKTPLEIAQKFERMGATDLHLVDLDDANIGQT CCCCCEEECCCCCEEEEEECCCCCCEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCC RNLEIVRKIKEETRLKIEIGGGIRDFDTVRMYLEQIGVERVILGTAAVEKPDFLKELLIK CCHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHCHHEEEEEHHCCCCHHHHHHHHHH YGPSKIIVGVDIREGFVSTSGWLEKTSLPYLSFLKKLERIGVKTTIITDISKDGTLTGPN CCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCEECCC FKLYDEISKESSLNVIISGGVKDNSDIQRATRSDFYGIIVGKAYYEKKINLEKEFRNAN EEEHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCEEEEEECHHHHHHCCHHHHCCCCC >Mature Secondary Structure MKIIPAIDLQNGEAVRLYKGDYDKKTVYSKTPLEIAQKFERMGATDLHLVDLDDANIGQT CCCCCEEECCCCCEEEEEECCCCCCEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCC RNLEIVRKIKEETRLKIEIGGGIRDFDTVRMYLEQIGVERVILGTAAVEKPDFLKELLIK CCHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHCHHEEEEEHHCCCCHHHHHHHHHH YGPSKIIVGVDIREGFVSTSGWLEKTSLPYLSFLKKLERIGVKTTIITDISKDGTLTGPN CCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCEECCC FKLYDEISKESSLNVIISGGVKDNSDIQRATRSDFYGIIVGKAYYEKKINLEKEFRNAN EEEHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCEEEEEECHHHHHHCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1400209; 11337471 [H]