| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is hisB
Identifier: 15673192
GI number: 15673192
Start: 1233461
End: 1234063
Strand: Direct
Name: hisB
Synonym: L0068
Alternate gene names: 15673192
Gene position: 1233461-1234063 (Clockwise)
Preceding gene: 15673191
Following gene: 15673193
Centisome position: 52.14
GC content: 39.8
Gene sequence:
>603_bases ATGACACGCATATCACACATCACGCGTAATACCAAAGAAACACAAATCGAACTTTCCATCAATCTTGACGGCACAGGTCA AGCGGACATTAGTACAGGTATTGGTTTTCTCGACCACATGCTGACACTTCTCACCTTTCACAGCGATTTTGACTTAAAAA TCATAGGACATGGGGATCATGAAACAGTAGGGATGGACCCGCACCATCTCATTGAAGATGTTGCGATTGCTCTTGGCAAA TGTATCAGCGAAGCATTAGGTAATAAGCTCGGTATTCGACGTTATGGAAGTTTTACCATTCCAATGGATGAAGCTTTGGT GACTTGTGATTTAGATATTAGTGGACGACCTTATTTGGTATTTCATGCTGATTTATCAGGAAATCAAAAACTTGGTGGCT ATGATACAGAAATGACTGAAGAATTTTTTCGTGTTCTTGCTTTTAATGCTGGGATTACGTTACATCTGAACGAAAATTAT GGGCAAAATACGCATCATATTATTGAAGGCATGTTTAAATCTACAGCGAGGGCGCTAAAACAAGCTGTAAGTATTGATGA AGCGAAAGTTGGAGAAATACCGAGCAGTAAGGGAGTGTTATGA
Upstream 100 bases:
>100_bases CCATGCTTAAGTTAGAGCAAAAAGTAGCGAAAGACCAAACGCTGTATCCAGTCGCACGATTACATCATTTGATATTTAAA AAAACTAAGGAGAACCTGTT
Downstream 100 bases:
>100_bases CTAATCTAAAAGAATTAAGAATTAATATTGAGAAATTTCCTGAAGCACTTCACAATACGCTAAAAGATGCAAAAATATAT GATAGCAGTTCCTCTCCTGA
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD [H]
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MTRISHITRNTKETQIELSINLDGTGQADISTGIGFLDHMLTLLTFHSDFDLKIIGHGDHETVGMDPHHLIEDVAIALGK CISEALGNKLGIRRYGSFTIPMDEALVTCDLDISGRPYLVFHADLSGNQKLGGYDTEMTEEFFRVLAFNAGITLHLNENY GQNTHHIIEGMFKSTARALKQAVSIDEAKVGEIPSSKGVL
Sequences:
>Translated_200_residues MTRISHITRNTKETQIELSINLDGTGQADISTGIGFLDHMLTLLTFHSDFDLKIIGHGDHETVGMDPHHLIEDVAIALGK CISEALGNKLGIRRYGSFTIPMDEALVTCDLDISGRPYLVFHADLSGNQKLGGYDTEMTEEFFRVLAFNAGITLHLNENY GQNTHHIIEGMFKSTARALKQAVSIDEAKVGEIPSSKGVL >Mature_199_residues TRISHITRNTKETQIELSINLDGTGQADISTGIGFLDHMLTLLTFHSDFDLKIIGHGDHETVGMDPHHLIEDVAIALGKC ISEALGNKLGIRRYGSFTIPMDEALVTCDLDISGRPYLVFHADLSGNQKLGGYDTEMTEEFFRVLAFNAGITLHLNENYG QNTHHIIEGMFKSTARALKQAVSIDEAKVGEIPSSKGVL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=198, Percent_Identity=46.4646464646465, Blast_Score=175, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6324776, Length=218, Percent_Identity=36.697247706422, Blast_Score=124, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD [H]
EC number: =4.2.1.19 [H]
Molecular weight: Translated: 21952; Mature: 21821
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRISHITRNTKETQIELSINLDGTGQADISTGIGFLDHMLTLLTFHSDFDLKIIGHGDH CCCCHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC ETVGMDPHHLIEDVAIALGKCISEALGNKLGIRRYGSFTIPMDEALVTCDLDISGRPYLV CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEECCCCCEEEEEEECCCCCEEEE FHADLSGNQKLGGYDTEMTEEFFRVLAFNAGITLHLNENYGQNTHHIIEGMFKSTARALK EEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH QAVSIDEAKVGEIPSSKGVL HHHCCCCHHCCCCCCCCCCC >Mature Secondary Structure TRISHITRNTKETQIELSINLDGTGQADISTGIGFLDHMLTLLTFHSDFDLKIIGHGDH CCCHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC ETVGMDPHHLIEDVAIALGKCISEALGNKLGIRRYGSFTIPMDEALVTCDLDISGRPYLV CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEECCCCCEEEEEEECCCCCEEEE FHADLSGNQKLGGYDTEMTEEFFRVLAFNAGITLHLNENYGQNTHHIIEGMFKSTARALK EEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH QAVSIDEAKVGEIPSSKGVL HHHCCCCHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1400209; 11337471 [H]