Click here to switch to the map view.

The map label for this gene is ylfC

Identifier: 15673120

GI number: 15673120

Start: 1152577

End: 1153104

Strand: Direct

Name: ylfC

Synonym: L152305

Alternate gene names: 15673120

Gene position: 1152577-1153104 (Clockwise)

Preceding gene: 15673119

Following gene: 15673121

Centisome position: 48.72

GC content: 37.5

Gene sequence:

>528_bases
ATGGGAGAGCTTTTTGTAAGTCCAGCTTATCAAGTGAGACGGGTTCCAATTGAAAAGATTAGAGCAAATTCTTATAATCC
TAATAAAACTGCGCCGACTGAATTTAAACTTTTAGAACGGTCGATATTAGAAGATGGTTATACCATGCCAATTGTCTGCT
ATTATGACAAAGAAAATGATACTTATGAGATTGTGGATGGTTTTCACCGCTATCTTGTAATGAAAAATTCTGAAACGATT
GCGCAAAGAGAAGGGAACTGTTTACCCGTTTCTGTGATTGATCGCCCATTAGAAGATAGAATAGCCAGCACTATTCGCCA
TAATCGTGCCAGAGGGACTCATTCAGTAGAATTAATGACAGAAATTGTTCAACAATTGGTTGAAGCTGGTTTAAGTGATC
GGTGGATTATGACAAATATTGGAATGGATAAAGAAGAATTATTAAGGCTCAAACAATTAAGTGGGCTTGCCTCTTTGTTT
AAAGGAGGGGAGTTTTCACGGTCTTGGGAATGGGATAAAGAAGAATAG

Upstream 100 bases:

>100_bases
GAATGTGTGTCACCATTTTAAAAAATGATACTTCCTGTCAATATATGGGATTTGGTCAAACGAAAGATGAATTGCAAAAG
AAGAAGGAGGCAATGAAAAA

Downstream 100 bases:

>100_bases
AGTGTAGTTAAAGCTACCCTCTTTTTTATCTATATTTTCCGTTTTGTAAAGTCAATTGCTATCCATAGGTGTGTTATAAT
AGGTCAAGTATTTGTGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MGELFVSPAYQVRRVPIEKIRANSYNPNKTAPTEFKLLERSILEDGYTMPIVCYYDKENDTYEIVDGFHRYLVMKNSETI
AQREGNCLPVSVIDRPLEDRIASTIRHNRARGTHSVELMTEIVQQLVEAGLSDRWIMTNIGMDKEELLRLKQLSGLASLF
KGGEFSRSWEWDKEE

Sequences:

>Translated_175_residues
MGELFVSPAYQVRRVPIEKIRANSYNPNKTAPTEFKLLERSILEDGYTMPIVCYYDKENDTYEIVDGFHRYLVMKNSETI
AQREGNCLPVSVIDRPLEDRIASTIRHNRARGTHSVELMTEIVQQLVEAGLSDRWIMTNIGMDKEELLRLKQLSGLASLF
KGGEFSRSWEWDKEE
>Mature_174_residues
GELFVSPAYQVRRVPIEKIRANSYNPNKTAPTEFKLLERSILEDGYTMPIVCYYDKENDTYEIVDGFHRYLVMKNSETIA
QREGNCLPVSVIDRPLEDRIASTIRHNRARGTHSVELMTEIVQQLVEAGLSDRWIMTNIGMDKEELLRLKQLSGLASLFK
GGEFSRSWEWDKEE

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786817, Length=151, Percent_Identity=47.0198675496689, Blast_Score=143, Evalue=8e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 20275; Mature: 20144

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGELFVSPAYQVRRVPIEKIRANSYNPNKTAPTEFKLLERSILEDGYTMPIVCYYDKEND
CCCCCCCCCHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCC
TYEIVDGFHRYLVMKNSETIAQREGNCLPVSVIDRPLEDRIASTIRHNRARGTHSVELMT
CHHHHHHHHHEEEECCCCHHHHCCCCEEEHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHH
EIVQQLVEAGLSDRWIMTNIGMDKEELLRLKQLSGLASLFKGGEFSRSWEWDKEE
HHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GELFVSPAYQVRRVPIEKIRANSYNPNKTAPTEFKLLERSILEDGYTMPIVCYYDKEND
CCCCCCCCHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCC
TYEIVDGFHRYLVMKNSETIAQREGNCLPVSVIDRPLEDRIASTIRHNRARGTHSVELMT
CHHHHHHHHHEEEECCCCHHHHCCCCEEEHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHH
EIVQQLVEAGLSDRWIMTNIGMDKEELLRLKQLSGLASLFKGGEFSRSWEWDKEE
HHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]