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The map label for this gene is ykcE

Identifier: 15672981

GI number: 15672981

Start: 1027131

End: 1027574

Strand: Direct

Name: ykcE

Synonym: L26878

Alternate gene names: 15672981

Gene position: 1027131-1027574 (Clockwise)

Preceding gene: 15672980

Following gene: 15672982

Centisome position: 43.42

GC content: 34.01

Gene sequence:

>444_bases
ATGAACTTTTTTAATCAGATTTTTCATAATCAAATTTTAATGACAGCCATTGTGAGTTGGGCTCTGGCTCAGTTAATTAA
AATAATTATCGAACTTATTCGGACACATCGTATTAATTGGCAATTAATTTTTGCAACAGGTGGAATGCCCAGCTCTCATA
GTTCATTGGTTGTTGCTTTGGCAACGGCTACTGGATTGAGACAAGGATTTGATTCATCGCTTTTTGCTATTGCTACTGTT
TTAGCCTTCGTTGTTTTATATGATGCCCAAGGTATTAGAAGACAGGCAGGAAATCAAGCCAGAATTATTAATCGAATGTT
ACAAAATGTCGAAAATGCCGGAATCAAAGTAGATAAAAATTTAAAAGAATTATTGGGGCATACACCAATTCAAGTGATGG
GTGGAACAATTTTAGGAATAATAGTTGCTTTAGTAATGAATTAA

Upstream 100 bases:

>100_bases
TTTCTGTATTTGTCAGCAAATCAGACATCAATAAAAGATAGATGATGTATAATAGAGTTACTGATAGTTAGTAGGTTTTT
ATTAGTAAAAGGAGACTATT

Downstream 100 bases:

>100_bases
GAAAAAATTCTGTTGCAATCAGAGTCGTAAGCGTTAACTATAGTGTAGTTTATAAATGCGAAGTAAAAAATGAGAAATTA
TCATCTAAAAATTAAGGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MNFFNQIFHNQILMTAIVSWALAQLIKIIIELIRTHRINWQLIFATGGMPSSHSSLVVALATATGLRQGFDSSLFAIATV
LAFVVLYDAQGIRRQAGNQARIINRMLQNVENAGIKVDKNLKELLGHTPIQVMGGTILGIIVALVMN

Sequences:

>Translated_147_residues
MNFFNQIFHNQILMTAIVSWALAQLIKIIIELIRTHRINWQLIFATGGMPSSHSSLVVALATATGLRQGFDSSLFAIATV
LAFVVLYDAQGIRRQAGNQARIINRMLQNVENAGIKVDKNLKELLGHTPIQVMGGTILGIIVALVMN
>Mature_147_residues
MNFFNQIFHNQILMTAIVSWALAQLIKIIIELIRTHRINWQLIFATGGMPSSHSSLVVALATATGLRQGFDSSLFAIATV
LAFVVLYDAQGIRRQAGNQARIINRMLQNVENAGIKVDKNLKELLGHTPIQVMGGTILGIIVALVMN

Specific function: Unknown

COG id: COG1963

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003832 [H]

Pfam domain/function: PF02681 DUF212 [H]

EC number: NA

Molecular weight: Translated: 16151; Mature: 16151

Theoretical pI: Translated: 11.16; Mature: 11.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFFNQIFHNQILMTAIVSWALAQLIKIIIELIRTHRINWQLIFATGGMPSSHSSLVVAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHH
ATATGLRQGFDSSLFAIATVLAFVVLYDAQGIRRQAGNQARIINRMLQNVENAGIKVDKN
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHCCCEECCC
LKELLGHTPIQVMGGTILGIIVALVMN
HHHHHCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNFFNQIFHNQILMTAIVSWALAQLIKIIIELIRTHRINWQLIFATGGMPSSHSSLVVAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHH
ATATGLRQGFDSSLFAIATVLAFVVLYDAQGIRRQAGNQARIINRMLQNVENAGIKVDKN
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHCCCEECCC
LKELLGHTPIQVMGGTILGIIVALVMN
HHHHHCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]