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The map label for this gene is ykaF

Identifier: 15672963

GI number: 15672963

Start: 1009013

End: 1009348

Strand: Direct

Name: ykaF

Synonym: L8730

Alternate gene names: 15672963

Gene position: 1009013-1009348 (Clockwise)

Preceding gene: 15672962

Following gene: 15672964

Centisome position: 42.65

GC content: 33.33

Gene sequence:

>336_bases
ATGATTTTGCAAGATGAATTGGATAAAAATCCAAGATTACATCAATTAGTAAAATATGGGCCGTCAGCATTTAAACAATC
TGATTATGGCTTAGCCGACGAGTTGAAAAATAATTCTGTCAGTAAAATTTATGTTTCTGGTGTGTCTATGAGTAATGGAG
TATTAAAAACAGCCAGAGATGGGGCGGACTTGGGATTTGAAGCGATGATAATTGAAGACGCCTGTGCTGACAGAAAGTTA
AAAAACTTCCAGAAAACAAAAACTGACGAAATACCAAAATTTGGGAAATTAATTAAAACAAAAGAAATTATCGAGGAACT
GAATAAAAATGTCTGA

Upstream 100 bases:

>100_bases
GAGCTTTAATTTCTGCATTTGACCAAAAAAATCAGCCAGTTTATATTGTGACTGTTGAACCAAAATACTTTGGCAATCAG
CTAAAAAAGCTTTTTCTCGG

Downstream 100 bases:

>100_bases
GAAATATGTCGTATTTGACTTTGAAACTACAGGATTTTCTGCACAAAAAAATGAAATTATTCAAATTGGAGCGGTAAAAT
ATGATGAGAATAATCAAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Isochorismatase

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MILQDELDKNPRLHQLVKYGPSAFKQSDYGLADELKNNSVSKIYVSGVSMSNGVLKTARDGADLGFEAMIIEDACADRKL
KNFQKTKTDEIPKFGKLIKTKEIIEELNKNV

Sequences:

>Translated_111_residues
MILQDELDKNPRLHQLVKYGPSAFKQSDYGLADELKNNSVSKIYVSGVSMSNGVLKTARDGADLGFEAMIIEDACADRKL
KNFQKTKTDEIPKFGKLIKTKEIIEELNKNV
>Mature_111_residues
MILQDELDKNPRLHQLVKYGPSAFKQSDYGLADELKNNSVSKIYVSGVSMSNGVLKTARDGADLGFEAMIIEDACADRKL
KNFQKTKTDEIPKFGKLIKTKEIIEELNKNV

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12448; Mature: 12448

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILQDELDKNPRLHQLVKYGPSAFKQSDYGLADELKNNSVSKIYVSGVSMSNGVLKTARD
CCCCCCCCCCCHHHHHHHHCHHHHCCCCCCCHHHHCCCCCCEEEEECCCCCCCCHHHCCC
GADLGFEAMIIEDACADRKLKNFQKTKTDEIPKFGKLIKTKEIIEELNKNV
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MILQDELDKNPRLHQLVKYGPSAFKQSDYGLADELKNNSVSKIYVSGVSMSNGVLKTARD
CCCCCCCCCCCHHHHHHHHCHHHHCCCCCCCHHHHCCCCCCEEEEECCCCCCCCHHHCCC
GADLGFEAMIIEDACADRKLKNFQKTKTDEIPKFGKLIKTKEIIEELNKNV
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA