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The map label for this gene is yjgB

Identifier: 15672918

GI number: 15672918

Start: 961533

End: 962126

Strand: Direct

Name: yjgB

Synonym: L161266

Alternate gene names: 15672918

Gene position: 961533-962126 (Clockwise)

Preceding gene: 15672917

Following gene: 15672919

Centisome position: 40.65

GC content: 37.88

Gene sequence:

>594_bases
GTGTTATACTTGCTAACAATGTTGAAAAAAATAATTATTTCTGCAGCACTTCTTACAAGTTTTAGTGCTGCCCTGATTGC
GAATCCTGCAAAAGCAGATTCAGTATTTGATGATAATAAGGCACAAAGTTCACTGACAGATTTGTCAGCAGCAACAAATT
CACTTGATGTTTTAACAAAAACAATGAATGATACTGTCAGTGCCGTTTCAAAAGTAGAAAAAACACAAAGTGCGGCTAAA
GAAGTTCAGTCACGAGCTGACAAACTTGTCAGTACAGCCAAAAAATATTTAGGTGTTCCCTATGTTTGGGGTGGAACTAC
ACCAGCTGGCTTTGATTGTTCAGGATTCACAAGTTACGTCTATAGAGAAGTTTTAGGTAAAGAAATTGGTCGTACAACTT
GGGACCAAATTGCAAGTGGAAAACAAGTCGGACTTGACCAAGCCAAAGTTGGAGATTTGATTATCTTTTATGGTGGAGAC
CATGTGGGAATTTATCTTGGAAATGGCCAAGTGATTCATGCACCACAACCTGGTGAGTCAGTTAAAATCAGTTCAGTTAC
TGATATGTCGGCTGATTTTGCATTAGAGTATTAA

Upstream 100 bases:

>100_bases
TTAAGTGGTTTTGTTACGTAAAGATTAAATGTAAATTTTTTCGGTAACAAATTTACAAAAAATTAAAAGCTTGTAAAACC
GCTTGTCAGGCGGTTTTTTT

Downstream 100 bases:

>100_bases
ATATAATAGAAGAAAATAGCATTTATTGCTATTTTTTTGTTATTCTTATAGCTAAATCTGGCTATAAGTTTTTTTTATGG
CAAAGGTCTTAAGTTCGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MLYLLTMLKKIIISAALLTSFSAALIANPAKADSVFDDNKAQSSLTDLSAATNSLDVLTKTMNDTVSAVSKVEKTQSAAK
EVQSRADKLVSTAKKYLGVPYVWGGTTPAGFDCSGFTSYVYREVLGKEIGRTTWDQIASGKQVGLDQAKVGDLIIFYGGD
HVGIYLGNGQVIHAPQPGESVKISSVTDMSADFALEY

Sequences:

>Translated_197_residues
MLYLLTMLKKIIISAALLTSFSAALIANPAKADSVFDDNKAQSSLTDLSAATNSLDVLTKTMNDTVSAVSKVEKTQSAAK
EVQSRADKLVSTAKKYLGVPYVWGGTTPAGFDCSGFTSYVYREVLGKEIGRTTWDQIASGKQVGLDQAKVGDLIIFYGGD
HVGIYLGNGQVIHAPQPGESVKISSVTDMSADFALEY
>Mature_197_residues
MLYLLTMLKKIIISAALLTSFSAALIANPAKADSVFDDNKAQSSLTDLSAATNSLDVLTKTMNDTVSAVSKVEKTQSAAK
EVQSRADKLVSTAKKYLGVPYVWGGTTPAGFDCSGFTSYVYREVLGKEIGRTTWDQIASGKQVGLDQAKVGDLIIFYGGD
HVGIYLGNGQVIHAPQPGESVKISSVTDMSADFALEY

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Secreted, cell wall [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C40 family [H]

Homologues:

Organism=Escherichia coli, GI1786421, Length=107, Percent_Identity=37.3831775700935, Blast_Score=84, Evalue=5e-18,
Organism=Escherichia coli, GI1788501, Length=82, Percent_Identity=45.1219512195122, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1787944, Length=100, Percent_Identity=36, Blast_Score=81, Evalue=4e-17,
Organism=Escherichia coli, GI1788001, Length=86, Percent_Identity=39.5348837209302, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 20970; Mature: 20970

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYLLTMLKKIIISAALLTSFSAALIANPAKADSVFDDNKAQSSLTDLSAATNSLDVLTK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
TMNDTVSAVSKVEKTQSAAKEVQSRADKLVSTAKKYLGVPYVWGGTTPAGFDCSGFTSYV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHH
YREVLGKEIGRTTWDQIASGKQVGLDQAKVGDLIIFYGGDHVGIYLGNGQVIHAPQPGES
HHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEEECCCEEEECCCCCCC
VKISSVTDMSADFALEY
EEEECCCCCCCCCEECC
>Mature Secondary Structure
MLYLLTMLKKIIISAALLTSFSAALIANPAKADSVFDDNKAQSSLTDLSAATNSLDVLTK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
TMNDTVSAVSKVEKTQSAAKEVQSRADKLVSTAKKYLGVPYVWGGTTPAGFDCSGFTSYV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHH
YREVLGKEIGRTTWDQIASGKQVGLDQAKVGDLIIFYGGDHVGIYLGNGQVIHAPQPGES
HHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEEECCCEEEECCCCCCC
VKISSVTDMSADFALEY
EEEECCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2780297 [H]