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The map label for this gene is yjgC

Identifier: 15672919

GI number: 15672919

Start: 962264

End: 963109

Strand: Direct

Name: yjgC

Synonym: L162009

Alternate gene names: 15672919

Gene position: 962264-963109 (Clockwise)

Preceding gene: 15672918

Following gene: 15672920

Centisome position: 40.68

GC content: 36.05

Gene sequence:

>846_bases
ATGAGAACATCACTAAAGGTCACATTTGCCGCTCTTTCACTTATCGCTGCTGGAACTTTGGTTGCATGCTCATCAGGTTC
AAAAGATTCATCAGATAAAGCAATATCTGTTGTGATTGCGACAGATGGGGCAACAAAGCCATTTACTTATTCAGATAGTC
AAGGAAATTTAACGGGTTACGATATTGAGGTTGCTCGTGCGGTTTTCAAGAAATTGCCACAGTATAAAGTGAAATTTCAA
GTGACAGATTTTTCTGGGATTTCACCAGGGATTGATTCTGGCCGTTACCAAATGGGTGCTAATGATTTTGGTTGGGAAAA
AAGTAGAGCTGAAAAATATTATTTCTCATCACCACTTTCAAAATCAAACAATGCAGTTCTTGTGAAATCTGGGACTTATA
AAACTTTGGCAGATTTGGCTGGAAAATCGACAATTGGTAATCCAGCATCAAATTATACAAAGTCAATTCAAGATTGGAAC
AAAGCCAATCCAGATAAAGAAATCAAAATTAGTTACTCAGCAGATTCTACTTCAATTAACACAAGATTCACGCAAGTTGA
ATCAGGAAAAATTGATTTCATGCTTTATGATAAGATTTCTTTAGAGTCTGCAGTTAAAGAACAAGGTTTTGACAATCTAA
AAATTGAAGATATCAGTATGGATACTGGTGATGCTGAACATGACGGTTATGAATATTTCCTCTTTGGCAAAGATTCGCAA
GGTAAAAAACTTCAAAAAGATGTGAATGGAGTTTTGGCAAAAATGCAGGCTGATGGTAGTTTGGCGAAAATTTCCAAGAA
ATATCTTGGTGGGGATTTCGTGCCAAAAGCAGAAATGTTTAAGTAA

Upstream 100 bases:

>100_bases
TGTTATTCTTATAGCTAAATCTGGCTATAAGTTTTTTTTATGGCAAAGGTCTTAAGTTCGTGTTAAGATAGGTCTATCAA
ATTTTTAAAGGGGAACTTTT

Downstream 100 bases:

>100_bases
ATTTTACTGACAAGAAATTTAACCTAAAATCGAAGAGCTGTCAGTAAAATATTTGTCTCTTGACCAATCAAAATTTACTG
ACAGTTCAGTTCGTAAAAAA

Product: amino acid ABC transporter substrate binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MRTSLKVTFAALSLIAAGTLVACSSGSKDSSDKAISVVIATDGATKPFTYSDSQGNLTGYDIEVARAVFKKLPQYKVKFQ
VTDFSGISPGIDSGRYQMGANDFGWEKSRAEKYYFSSPLSKSNNAVLVKSGTYKTLADLAGKSTIGNPASNYTKSIQDWN
KANPDKEIKISYSADSTSINTRFTQVESGKIDFMLYDKISLESAVKEQGFDNLKIEDISMDTGDAEHDGYEYFLFGKDSQ
GKKLQKDVNGVLAKMQADGSLAKISKKYLGGDFVPKAEMFK

Sequences:

>Translated_281_residues
MRTSLKVTFAALSLIAAGTLVACSSGSKDSSDKAISVVIATDGATKPFTYSDSQGNLTGYDIEVARAVFKKLPQYKVKFQ
VTDFSGISPGIDSGRYQMGANDFGWEKSRAEKYYFSSPLSKSNNAVLVKSGTYKTLADLAGKSTIGNPASNYTKSIQDWN
KANPDKEIKISYSADSTSINTRFTQVESGKIDFMLYDKISLESAVKEQGFDNLKIEDISMDTGDAEHDGYEYFLFGKDSQ
GKKLQKDVNGVLAKMQADGSLAKISKKYLGGDFVPKAEMFK
>Mature_281_residues
MRTSLKVTFAALSLIAAGTLVACSSGSKDSSDKAISVVIATDGATKPFTYSDSQGNLTGYDIEVARAVFKKLPQYKVKFQ
VTDFSGISPGIDSGRYQMGANDFGWEKSRAEKYYFSSPLSKSNNAVLVKSGTYKTLADLAGKSTIGNPASNYTKSIQDWN
KANPDKEIKISYSADSTSINTRFTQVESGKIDFMLYDKISLESAVKEQGFDNLKIEDISMDTGDAEHDGYEYFLFGKDSQ
GKKLQKDVNGVLAKMQADGSLAKISKKYLGGDFVPKAEMFK

Specific function: Part of the ABC transporter complex tcyJKLMN involved in L-cystine import. Is also involved in cystathionine, djenkolate, and S-methylcysteine transport [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=247, Percent_Identity=28.3400809716599, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787085, Length=224, Percent_Identity=25, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787031, Length=273, Percent_Identity=27.8388278388278, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001638 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 30610; Mature: 30610

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTSLKVTFAALSLIAAGTLVACSSGSKDSSDKAISVVIATDGATKPFTYSDSQGNLTGY
CCCCEEHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCEEEC
DIEVARAVFKKLPQYKVKFQVTDFSGISPGIDSGRYQMGANDFGWEKSRAEKYYFSSPLS
HHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCHHHCCCEEECCCCC
KSNNAVLVKSGTYKTLADLAGKSTIGNPASNYTKSIQDWNKANPDKEIKISYSADSTSIN
CCCCEEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
TRFTQVESGKIDFMLYDKISLESAVKEQGFDNLKIEDISMDTGDAEHDGYEYFLFGKDSQ
EEEEEEECCCEEEEEECCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCC
GKKLQKDVNGVLAKMQADGSLAKISKKYLGGDFVPKAEMFK
CHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHCCC
>Mature Secondary Structure
MRTSLKVTFAALSLIAAGTLVACSSGSKDSSDKAISVVIATDGATKPFTYSDSQGNLTGY
CCCCEEHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCEEEC
DIEVARAVFKKLPQYKVKFQVTDFSGISPGIDSGRYQMGANDFGWEKSRAEKYYFSSPLS
HHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCHHHCCCEEECCCCC
KSNNAVLVKSGTYKTLADLAGKSTIGNPASNYTKSIQDWNKANPDKEIKISYSADSTSIN
CCCCEEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
TRFTQVESGKIDFMLYDKISLESAVKEQGFDNLKIEDISMDTGDAEHDGYEYFLFGKDSQ
EEEEEEECCCEEEEEECCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCC
GKKLQKDVNGVLAKMQADGSLAKISKKYLGGDFVPKAEMFK
CHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]