| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is tagD2
Identifier: 15672906
GI number: 15672906
Start: 950851
End: 951291
Strand: Direct
Name: tagD2
Synonym: L150584
Alternate gene names: 15672906
Gene position: 950851-951291 (Clockwise)
Preceding gene: 15672905
Following gene: 15672907
Centisome position: 40.2
GC content: 30.61
Gene sequence:
>441_bases ATGGATAAAGAAAAAGTTGTTTTAGTTGCAGGGACGTTTGATATTTTACATGAGAGTCATGTTAATATGTTACGAAATGC GAAAAATTTGGGGAGTAAGTTGATTGTTATGCTTTCAACTGATGAGTTTAATGCTGGAAAAGGTAAAAAAGCTTTTCAAG ATTATGATACAAGAAAGTATGTTTTAGAATCAATTCGCTATGTGGATTTGGTTGTGCCAGAGCAATCTTGGGATGATAAG AGCCTTTATATTGATATGTTTGATGTTGATATTTTTGCGATGGGTGATGACTGGAAAGGGAAATTTGATTTTCTAAAAGA AGAATTTCCTAATTTAAAAATTATGTATTTTCCACGTGGTAAAGTTTCTTCTTCAAATATAAAAAAGGAAATGGGAAAAC TTTATTCAAAAAAGGAAAGCAGTGATAATACTACCAAATGA
Upstream 100 bases:
>100_bases ATAATTTTATCAATCAACATGGAAATTCTAAAAAAAATGGATATCTTTTGAATAGTCGATATGTTGCTTGGTATAAAAAT TAGTAATTAAGGGAGAAAAA
Downstream 100 bases:
>100_bases ATAAGTGGTAAGAGCTAATTAATAGAAAATGAGTTTATGAGCGATTTAAGTCTGATTTTTTCTAAATTTTCTTTTTTAGG AAATCCAACTAAACTAATCA
Product: glycerol-3-phosphate cytidyltransferase
Products: NA
Alternate protein names: GCT; Gro-PCT; CDP-glycerol pyrophosphorylase; Teichoic acid biosynthesis protein D [H]
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MDKEKVVLVAGTFDILHESHVNMLRNAKNLGSKLIVMLSTDEFNAGKGKKAFQDYDTRKYVLESIRYVDLVVPEQSWDDK SLYIDMFDVDIFAMGDDWKGKFDFLKEEFPNLKIMYFPRGKVSSSNIKKEMGKLYSKKESSDNTTK
Sequences:
>Translated_146_residues MDKEKVVLVAGTFDILHESHVNMLRNAKNLGSKLIVMLSTDEFNAGKGKKAFQDYDTRKYVLESIRYVDLVVPEQSWDDK SLYIDMFDVDIFAMGDDWKGKFDFLKEEFPNLKIMYFPRGKVSSSNIKKEMGKLYSKKESSDNTTK >Mature_146_residues MDKEKVVLVAGTFDILHESHVNMLRNAKNLGSKLIVMLSTDEFNAGKGKKAFQDYDTRKYVLESIRYVDLVVPEQSWDDK SLYIDMFDVDIFAMGDDWKGKFDFLKEEFPNLKIMYFPRGKVSSSNIKKEMGKLYSKKESSDNTTK
Specific function: Provides activated glycerol phosphate for teichoic acid synthesis, via incorporation into both the linkage unit and the teichoic acid polymer by TagB and TagF [H]
COG id: COG0615
COG function: function code MI; Cytidylyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytidylyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR006409 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2 [H]
EC number: =2.7.7.39 [H]
Molecular weight: Translated: 16913; Mature: 16913
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKEKVVLVAGTFDILHESHVNMLRNAKNLGSKLIVMLSTDEFNAGKGKKAFQDYDTRKY CCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHCCCHHHH VLESIRYVDLVVPEQSWDDKSLYIDMFDVDIFAMGDDWKGKFDFLKEEFPNLKIMYFPRG HHHHHHEEEEEECCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHCCCCEEEEECCC KVSSSNIKKEMGKLYSKKESSDNTTK CCCHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MDKEKVVLVAGTFDILHESHVNMLRNAKNLGSKLIVMLSTDEFNAGKGKKAFQDYDTRKY CCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHCCCHHHH VLESIRYVDLVVPEQSWDDKSLYIDMFDVDIFAMGDDWKGKFDFLKEEFPNLKIMYFPRG HHHHHHEEEEEECCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHCCCCEEEEECCC KVSSSNIKKEMGKLYSKKESSDNTTK CCCHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1906926; 8393871; 9384377; 9182537; 11487587; 10508782 [H]