Definition Lactococcus lactis subsp. lactis Il1403, complete genome.
Accession NC_002662
Length 2,365,589

Click here to switch to the map view.

The map label for this gene is yjfB

Identifier: 15672907

GI number: 15672907

Start: 951328

End: 951759

Strand: Direct

Name: yjfB

Synonym: L151067

Alternate gene names: NA

Gene position: 951328-951759 (Clockwise)

Preceding gene: 15672906

Following gene: 15672908

Centisome position: 40.22

GC content: 26.62

Gene sequence:

>432_bases
ATGAGCGATTTAAGTCTGATTTTTTCTAAATTTTCTTTTTTAGGAAATCCAACTAAACTAATCAAAATATTTTTGCAACT
TGAAAATTTGATAAAAAAACAAAAATCAAATTATCCTAAGCCAGATGTCAGTGATGTGTTATACGTTAAAGTCGAAGATG
ATATCTATCGATTGCATAAGAAAAAGTTTATTAAAGAAGTGATTTTACCAAATGGAGCAAACGTGATTATTCTTTCAAAA
TTAGCGCTTGCCAATTCTTTAAAAATTGTAGGTAAACCGGGAGATGGTGATCTTAATCAAATTTTAAAAGCTTTGCGTAA
AGAAAAGGATTTGAAAAAGTGTCAAGAAATTATTAATGAAATTTCAGATTCGTTTTTAACAAATTTATCAATTAAAGAGT
TGATAAAAATTATTCGAAAACAAATGGGCTAA

Upstream 100 bases:

>100_bases
TATAAAAAAGGAAATGGGAAAACTTTATTCAAAAAAGGAAAGCAGTGATAATACTACCAAATGAATAAGTGGTAAGAGCT
AATTAATAGAAAATGAGTTT

Downstream 100 bases:

>100_bases
AATCATTTGAAAGGGGAAAAATGCTAAATTTATTAGTCAAAATGCGATTATTAATACTTAGAAAAATGTTATCTCTTTTC
CTTTTGATTTTAGGGAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MSDLSLIFSKFSFLGNPTKLIKIFLQLENLIKKQKSNYPKPDVSDVLYVKVEDDIYRLHKKKFIKEVILPNGANVIILSK
LALANSLKIVGKPGDGDLNQILKALRKEKDLKKCQEIINEISDSFLTNLSIKELIKIIRKQMG

Sequences:

>Translated_143_residues
MSDLSLIFSKFSFLGNPTKLIKIFLQLENLIKKQKSNYPKPDVSDVLYVKVEDDIYRLHKKKFIKEVILPNGANVIILSK
LALANSLKIVGKPGDGDLNQILKALRKEKDLKKCQEIINEISDSFLTNLSIKELIKIIRKQMG
>Mature_142_residues
SDLSLIFSKFSFLGNPTKLIKIFLQLENLIKKQKSNYPKPDVSDVLYVKVEDDIYRLHKKKFIKEVILPNGANVIILSKL
ALANSLKIVGKPGDGDLNQILKALRKEKDLKKCQEIINEISDSFLTNLSIKELIKIIRKQMG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16297; Mature: 16165

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLSLIFSKFSFLGNPTKLIKIFLQLENLIKKQKSNYPKPDVSDVLYVKVEDDIYRLHK
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHH
KKFIKEVILPNGANVIILSKLALANSLKIVGKPGDGDLNQILKALRKEKDLKKCQEIINE
HHHHHHHHCCCCCCEEEHHHHHHHHCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ISDSFLTNLSIKELIKIIRKQMG
HHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SDLSLIFSKFSFLGNPTKLIKIFLQLENLIKKQKSNYPKPDVSDVLYVKVEDDIYRLHK
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHH
KKFIKEVILPNGANVIILSKLALANSLKIVGKPGDGDLNQILKALRKEKDLKKCQEIINE
HHHHHHHHCCCCCCEEEHHHHHHHHCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ISDSFLTNLSIKELIKIIRKQMG
HHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA