Click here to switch to the map view.

The map label for this gene is yjcF

Identifier: 15672886

GI number: 15672886

Start: 927135

End: 927782

Strand: Direct

Name: yjcF

Synonym: L126819

Alternate gene names: 15672886

Gene position: 927135-927782 (Clockwise)

Preceding gene: 15672885

Following gene: 15672887

Centisome position: 39.19

GC content: 36.57

Gene sequence:

>648_bases
ATGGACTACGAAAATTATATCTGGGATTTAGGCGGAACTTTATTGGACAATTATGAAAGTTCTAGTCATGCATTTGCTGC
AACGCTTTGGTCAATGGCAGAGCGTGTTGTTTTGCGCACTGATGTATATGATGCGCTAAAAGTTTCAACGGCTTACGCTG
TTGAAAAATATGCCAGTGATTTGCCAGGCTTTTTGGAAGAATACAAAAAGCTAGAAGCAGAGGAATTAGAAAAACCAATT
CTCTTTTCCGGTGCTAAAAAAGTACTGACAGACCTATCAGTAAAAGGAAATAAGAATTTTATGATTTCACATCGAAATCA
TCAAGTTCTGACAATTCTGTCAGCAGCTGAAATTGATTCATATTTTACAGAGGTTGTCACGTCTGATAATGGCTTCAAAC
GAAAACCAGCACCAGAATCAATTAACTATTTGTTAAATAAATATAAACTCAATCCAAAGAAGACAGTGATGATTGGCGAT
CGTCCTTTAGATATTGAAGCAGGAAATGCTGCTGGGATATCAACAATTTATTTTGATAGCTCAACAGATTCAACTCTGTC
AGGACAAGCGATTAACACTGTAAGTGATGGTTCGCTTAATAGCAAGCCAACTCACATTATTCATCAGCTGACAGAGATTA
TTTTGTAA

Upstream 100 bases:

>100_bases
AATTTAAAGGTAAAAAATTTCCAGTTAAAATTTTGAAAGCAAACTAAAAATATCCATTTCTGACAAAATGTTAGCTACTA
AAGTGTGTTATAATATTAAC

Downstream 100 bases:

>100_bases
TCTTAAAAAAATGAATTAATGATAAGCAGATTTTTAGTCAAAATTGCTTATTTTTTTTACAAGTTTGAGTGACAAAATAC
CATGCACTAGAGCTAAAATC

Product: hypothetical protein

Products: Glycolate; Phosphate [C]

Alternate protein names: HAD Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; P-Ser-HPr Phosphatase; Phosphatase; Hydrolase Haloacid Dehalogenase-Like Family; HAD-Superfamily Hydrolase / Phosphatase; HAD Family Hydrolase; DNA Gyrase Subunit B; Hydrolase; DNA Gyrase Related Protein; Haloacid Dehalogenase Family Hydrolase; Hydrolase HAD Family

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MDYENYIWDLGGTLLDNYESSSHAFAATLWSMAERVVLRTDVYDALKVSTAYAVEKYASDLPGFLEEYKKLEAEELEKPI
LFSGAKKVLTDLSVKGNKNFMISHRNHQVLTILSAAEIDSYFTEVVTSDNGFKRKPAPESINYLLNKYKLNPKKTVMIGD
RPLDIEAGNAAGISTIYFDSSTDSTLSGQAINTVSDGSLNSKPTHIIHQLTEIIL

Sequences:

>Translated_215_residues
MDYENYIWDLGGTLLDNYESSSHAFAATLWSMAERVVLRTDVYDALKVSTAYAVEKYASDLPGFLEEYKKLEAEELEKPI
LFSGAKKVLTDLSVKGNKNFMISHRNHQVLTILSAAEIDSYFTEVVTSDNGFKRKPAPESINYLLNKYKLNPKKTVMIGD
RPLDIEAGNAAGISTIYFDSSTDSTLSGQAINTVSDGSLNSKPTHIIHQLTEIIL
>Mature_215_residues
MDYENYIWDLGGTLLDNYESSSHAFAATLWSMAERVVLRTDVYDALKVSTAYAVEKYASDLPGFLEEYKKLEAEELEKPI
LFSGAKKVLTDLSVKGNKNFMISHRNHQVLTILSAAEIDSYFTEVVTSDNGFKRKPAPESINYLLNKYKLNPKKTVMIGD
RPLDIEAGNAAGISTIYFDSSTDSTLSGQAINTVSDGSLNSKPTHIIHQLTEIIL

Specific function: Unknown

COG id: COG0546

COG function: function code R; Predicted phosphatases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.3.18 [C]

Molecular weight: Translated: 23910; Mature: 23910

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYENYIWDLGGTLLDNYESSSHAFAATLWSMAERVVLRTDVYDALKVSTAYAVEKYASD
CCCCHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPGFLEEYKKLEAEELEKPILFSGAKKVLTDLSVKGNKNFMISHRNHQVLTILSAAEIDS
CHHHHHHHHHCCHHHHCCCHHHHCHHHHHHHCCCCCCCCEEEEECCCEEEEEEHHHHHHH
YFTEVVTSDNGFKRKPAPESINYLLNKYKLNPKKTVMIGDRPLDIEAGNAAGISTIYFDS
HHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCCCCEEEEEECC
STDSTLSGQAINTVSDGSLNSKPTHIIHQLTEIIL
CCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHC
>Mature Secondary Structure
MDYENYIWDLGGTLLDNYESSSHAFAATLWSMAERVVLRTDVYDALKVSTAYAVEKYASD
CCCCHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPGFLEEYKKLEAEELEKPILFSGAKKVLTDLSVKGNKNFMISHRNHQVLTILSAAEIDS
CHHHHHHHHHCCHHHHCCCHHHHCHHHHHHHCCCCCCCCEEEEECCCEEEEEEHHHHHHH
YFTEVVTSDNGFKRKPAPESINYLLNKYKLNPKKTVMIGDRPLDIEAGNAAGISTIYFDS
HHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCCCCEEEEEECC
STDSTLSGQAINTVSDGSLNSKPTHIIHQLTEIIL
CCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mg2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): 0.57 {phosphoglycolate}} [C]

Substrates: D-Glycerate 2-phosphatelyc; H2O [C]

Specific reaction: D-Glycerate 2-phosphatelyc + H2O --> Glycolate + Phosphate [C]

General reaction: Additional information:

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA