| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is yjcE
Identifier: 15672885
GI number: 15672885
Start: 925990
End: 927081
Strand: Direct
Name: yjcE
Synonym: L125734
Alternate gene names: NA
Gene position: 925990-927081 (Clockwise)
Preceding gene: 15672884
Following gene: 15672886
Centisome position: 39.14
GC content: 28.57
Gene sequence:
>1092_bases ATGGAAGAGTATTATTTACCATCGGAACTTAAAACGGACGTTTGGAAGTTAGCATTTCTTTGGTCAATTTTTATATTTTT GTCTTTTTTCGAGAATTTTTTTATTCAGGAATCTATCAATTCTGAAAGTTTGCGCCATATTATTTTAAGTTTATTAATTG GACTATTACTTATATATTTTTTGATATTTCTCATCAATCATTCTCGACGAAAGTTGGTCATCATCAACGAAGAAGGAATT CAATTACGGCTATTATTTCGTGAAGTTAAGATTGAGTGGAGAGATATCCGAGGAATGTATGTTCGTTCAGGTGTATTATA TATTTGTGAACAAACTTCATTTAATCCTGTCTATATTGAAAAGAAAATTTGGTATAAACGGCTAAAGTTTTATCAAAATT ATTTTGACCCAGGTCACAATTTAAAAATTGTATTGTCGATACAGGGCTCTATCATATCTATGGATATTAATGAACTTTCT ATTATTTGTGAAGAAGTATGGTTAAAACAGAGTGGTTTTGAACAAAGGGATTTATTTACAGAAAATCCTTTTGAAAAAAT TGATGAGGCCACTAGAGCAAGAAAATTAAATCCTTGGAAAAGGATTCTACTTTATGCTGTATTTTTTATTATTGCTCTGG GAGGTTTAATATTTAAAGATAAAATTAAAGAAACCTACAGTTTAGTGGATAATCAAGTTTATTATGTTGTAGATTCAAAA ACAAATAATGTACAATTTGCCTTTGAAACTTCAACTTTTGAAAAAAAACAAGAAGCGAGTATTGTTACTGACAGAGCTAT GAGAGAGCTTAGTTACTATTCAGAGGATTATTTCAATGATATTGAGAGAAAATATTATGATCATCAATTATTAACGGGAG AAAATTTTGCAATTGTAGCTGCAAGTCATCCAACTTGGTGGAAACAAACCTTTGATTTCAGTAGATATGTTAAGAAAAAT CAACTTCAAAAAATTACATTAACGAGTATAAAAAAACCACTTTTAAAGAATTATTTAACAGCACAGATGGAACTAACTCA GAATCAATTTAAAGGTAAAAAATTTCCAGTTAAAATTTTGAAAGCAAACTAA
Upstream 100 bases:
>100_bases CGAAATCAGAACAAGCTTAAAAGAAACCTAGGGGTTTCTTTTTTTAAAACTGTTTTATTAGAAAATTCTGATATAATATT TTTATTAGGAGAGAATTTTT
Downstream 100 bases:
>100_bases AAATATCCATTTCTGACAAAATGTTAGCTACTAAAGTGTGTTATAATATTAACATGGACTACGAAAATTATATCTGGGAT TTAGGCGGAACTTTATTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MEEYYLPSELKTDVWKLAFLWSIFIFLSFFENFFIQESINSESLRHIILSLLIGLLLIYFLIFLINHSRRKLVIINEEGI QLRLLFREVKIEWRDIRGMYVRSGVLYICEQTSFNPVYIEKKIWYKRLKFYQNYFDPGHNLKIVLSIQGSIISMDINELS IICEEVWLKQSGFEQRDLFTENPFEKIDEATRARKLNPWKRILLYAVFFIIALGGLIFKDKIKETYSLVDNQVYYVVDSK TNNVQFAFETSTFEKKQEASIVTDRAMRELSYYSEDYFNDIERKYYDHQLLTGENFAIVAASHPTWWKQTFDFSRYVKKN QLQKITLTSIKKPLLKNYLTAQMELTQNQFKGKKFPVKILKAN
Sequences:
>Translated_363_residues MEEYYLPSELKTDVWKLAFLWSIFIFLSFFENFFIQESINSESLRHIILSLLIGLLLIYFLIFLINHSRRKLVIINEEGI QLRLLFREVKIEWRDIRGMYVRSGVLYICEQTSFNPVYIEKKIWYKRLKFYQNYFDPGHNLKIVLSIQGSIISMDINELS IICEEVWLKQSGFEQRDLFTENPFEKIDEATRARKLNPWKRILLYAVFFIIALGGLIFKDKIKETYSLVDNQVYYVVDSK TNNVQFAFETSTFEKKQEASIVTDRAMRELSYYSEDYFNDIERKYYDHQLLTGENFAIVAASHPTWWKQTFDFSRYVKKN QLQKITLTSIKKPLLKNYLTAQMELTQNQFKGKKFPVKILKAN >Mature_363_residues MEEYYLPSELKTDVWKLAFLWSIFIFLSFFENFFIQESINSESLRHIILSLLIGLLLIYFLIFLINHSRRKLVIINEEGI QLRLLFREVKIEWRDIRGMYVRSGVLYICEQTSFNPVYIEKKIWYKRLKFYQNYFDPGHNLKIVLSIQGSIISMDINELS IICEEVWLKQSGFEQRDLFTENPFEKIDEATRARKLNPWKRILLYAVFFIIALGGLIFKDKIKETYSLVDNQVYYVVDSK TNNVQFAFETSTFEKKQEASIVTDRAMRELSYYSEDYFNDIERKYYDHQLLTGENFAIVAASHPTWWKQTFDFSRYVKKN QLQKITLTSIKKPLLKNYLTAQMELTQNQFKGKKFPVKILKAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43417; Mature: 43417
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEYYLPSELKTDVWKLAFLWSIFIFLSFFENFFIQESINSESLRHIILSLLIGLLLIYF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LIFLINHSRRKLVIINEEGIQLRLLFREVKIEWRDIRGMYVRSGVLYICEQTSFNPVYIE HHHHHCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHCCEEECCCEEEEEECCCCCEEEEH KKIWYKRLKFYQNYFDPGHNLKIVLSIQGSIISMDINELSIICEEVWLKQSGFEQRDLFT HHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEHHHHHHHHHHHHHHHCCCCHHHCCC ENPFEKIDEATRARKLNPWKRILLYAVFFIIALGGLIFKDKIKETYSLVDNQVYYVVDSK CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC TNNVQFAFETSTFEKKQEASIVTDRAMRELSYYSEDYFNDIERKYYDHQLLTGENFAIVA CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCEEEEE ASHPTWWKQTFDFSRYVKKNQLQKITLTSIKKPLLKNYLTAQMELTQNQFKGKKFPVKIL ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE KAN ECC >Mature Secondary Structure MEEYYLPSELKTDVWKLAFLWSIFIFLSFFENFFIQESINSESLRHIILSLLIGLLLIYF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LIFLINHSRRKLVIINEEGIQLRLLFREVKIEWRDIRGMYVRSGVLYICEQTSFNPVYIE HHHHHCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHCCEEECCCEEEEEECCCCCEEEEH KKIWYKRLKFYQNYFDPGHNLKIVLSIQGSIISMDINELSIICEEVWLKQSGFEQRDLFT HHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEHHHHHHHHHHHHHHHCCCCHHHCCC ENPFEKIDEATRARKLNPWKRILLYAVFFIIALGGLIFKDKIKETYSLVDNQVYYVVDSK CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC TNNVQFAFETSTFEKKQEASIVTDRAMRELSYYSEDYFNDIERKYYDHQLLTGENFAIVA CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCEEEEE ASHPTWWKQTFDFSRYVKKNQLQKITLTSIKKPLLKNYLTAQMELTQNQFKGKKFPVKIL ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE KAN ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA