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The map label for this gene is yjcD

Identifier: 15672884

GI number: 15672884

Start: 924977

End: 925909

Strand: Direct

Name: yjcD

Synonym: L124727

Alternate gene names: 15672884

Gene position: 924977-925909 (Clockwise)

Preceding gene: 15672883

Following gene: 15672885

Centisome position: 39.1

GC content: 35.05

Gene sequence:

>933_bases
ATGAACCCTCTTGATGTATGGTATAATATAAAAATGAATGTAAAAAAACAAATTTTTAAAGGCACACTTTATGCAGTAGT
TGCCGGTTGTATGTGGGGAATTTCTGGCATTTTTGGTCAGCTTTTTTTCCGTGATTATCATGGTAGCCCGCTTTGGATTA
CATCAACACGTTTAACGATTGCTGGTATTATTTTATTGGCCATGTCTTTTTCGCGAGACCATAAGCGTTTTTTTGATGTC
TGGAAATCAAAAAAGAATATGCCAACCCTCTTTTTGTATGTTTTTGGTGGGGTATTTTCTGTTCAATATTTTTATTATGT
GGCCATTCAACTTTCAAATAGTGCTACAGCGACAATTTTACAATATACAGCACCTGTTTTTATTATGCTTTATTTACTCA
TTTTTCAACGTCAAGTACCAAAACCCAAATCGGTCTTATTCGTCATTTTAGCAATGATAGGTGTTTTTTTGTTGATTACG
GACGGAAATATCAAACATTTATCAATCAGTCCCCTAGCTCTTGTAACAGGCCTTCTCGCTGGTGTAGCTGTTGTTATTTA
TTCAATCATCCCTCGGCCATTATTAGATAAATATGGCGCACTTAATATGACAGGTTGGGGAATGATGCTTGCGGGGATTG
CCTGTAATATCTTCTATCCAGTTTGGCGTATTGATTTTCGAATTGAACCCTTGTCAATTTTTTATGTTTTAACAATTTCT
ATTGTTGGAACAGCACTGGCTTTTTTATTGCTTTTAAGAGCCTTTCAATTGATTTCACCGCTTGTTGTTTCTGTTGCAAC
AGCTACTGAACCATTGACTTCTGTTTTTTTAAGTATTCCATTATTTGGCTTGAAATTAACCCCACTTGAATTACTAGGAA
TTGTTATGGTCATCGTTTCTGTTATTCTTCTATCGAAATCAGAACAAGCTTAA

Upstream 100 bases:

>100_bases
TTTGATAAAATATTAAGCTATTCTTTTAACTCCATTATGTCTTAAACTCACTAATAATCGAGAACGTAATTTATAAAAAC
ATAATGATGATTGAACCCTA

Downstream 100 bases:

>100_bases
AAGAAACCTAGGGGTTTCTTTTTTTAAAACTGTTTTATTAGAAAATTCTGATATAATATTTTTATTAGGAGAGAATTTTT
ATGGAAGAGTATTATTTACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MNPLDVWYNIKMNVKKQIFKGTLYAVVAGCMWGISGIFGQLFFRDYHGSPLWITSTRLTIAGIILLAMSFSRDHKRFFDV
WKSKKNMPTLFLYVFGGVFSVQYFYYVAIQLSNSATATILQYTAPVFIMLYLLIFQRQVPKPKSVLFVILAMIGVFLLIT
DGNIKHLSISPLALVTGLLAGVAVVIYSIIPRPLLDKYGALNMTGWGMMLAGIACNIFYPVWRIDFRIEPLSIFYVLTIS
IVGTALAFLLLLRAFQLISPLVVSVATATEPLTSVFLSIPLFGLKLTPLELLGIVMVIVSVILLSKSEQA

Sequences:

>Translated_310_residues
MNPLDVWYNIKMNVKKQIFKGTLYAVVAGCMWGISGIFGQLFFRDYHGSPLWITSTRLTIAGIILLAMSFSRDHKRFFDV
WKSKKNMPTLFLYVFGGVFSVQYFYYVAIQLSNSATATILQYTAPVFIMLYLLIFQRQVPKPKSVLFVILAMIGVFLLIT
DGNIKHLSISPLALVTGLLAGVAVVIYSIIPRPLLDKYGALNMTGWGMMLAGIACNIFYPVWRIDFRIEPLSIFYVLTIS
IVGTALAFLLLLRAFQLISPLVVSVATATEPLTSVFLSIPLFGLKLTPLELLGIVMVIVSVILLSKSEQA
>Mature_310_residues
MNPLDVWYNIKMNVKKQIFKGTLYAVVAGCMWGISGIFGQLFFRDYHGSPLWITSTRLTIAGIILLAMSFSRDHKRFFDV
WKSKKNMPTLFLYVFGGVFSVQYFYYVAIQLSNSATATILQYTAPVFIMLYLLIFQRQVPKPKSVLFVILAMIGVFLLIT
DGNIKHLSISPLALVTGLLAGVAVVIYSIIPRPLLDKYGALNMTGWGMMLAGIACNIFYPVWRIDFRIEPLSIFYVLTIS
IVGTALAFLLLLRAFQLISPLVVSVATATEPLTSVFLSIPLFGLKLTPLELLGIVMVIVSVILLSKSEQA

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1790092, Length=290, Percent_Identity=33.1034482758621, Blast_Score=147, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34570; Mature: 34570

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPLDVWYNIKMNVKKQIFKGTLYAVVAGCMWGISGIFGQLFFRDYHGSPLWITSTRLTI
CCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHH
AGIILLAMSFSRDHKRFFDVWKSKKNMPTLFLYVFGGVFSVQYFYYVAIQLSNSATATIL
HHHHHHHHHHCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHEEEEEECCCCHHHHH
QYTAPVFIMLYLLIFQRQVPKPKSVLFVILAMIGVFLLITDGNIKHLSISPLALVTGLLA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEECCCEEEEECCHHHHHHHHHH
GVAVVIYSIIPRPLLDKYGALNMTGWGMMLAGIACNIFYPVWRIDFRIEPLSIFYVLTIS
HHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEECHHHHHHHHHHH
IVGTALAFLLLLRAFQLISPLVVSVATATEPLTSVFLSIPLFGLKLTPLELLGIVMVIVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHHHHH
VILLSKSEQA
HHHHCCCCCC
>Mature Secondary Structure
MNPLDVWYNIKMNVKKQIFKGTLYAVVAGCMWGISGIFGQLFFRDYHGSPLWITSTRLTI
CCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHH
AGIILLAMSFSRDHKRFFDVWKSKKNMPTLFLYVFGGVFSVQYFYYVAIQLSNSATATIL
HHHHHHHHHHCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHEEEEEECCCCHHHHH
QYTAPVFIMLYLLIFQRQVPKPKSVLFVILAMIGVFLLITDGNIKHLSISPLALVTGLLA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEECCCEEEEECCHHHHHHHHHH
GVAVVIYSIIPRPLLDKYGALNMTGWGMMLAGIACNIFYPVWRIDFRIEPLSIFYVLTIS
HHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEECHHHHHHHHHHH
IVGTALAFLLLLRAFQLISPLVVSVATATEPLTSVFLSIPLFGLKLTPLELLGIVMVIVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHHHHH
VILLSKSEQA
HHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]