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The map label for this gene is yjbE

Identifier: 15672876

GI number: 15672876

Start: 914709

End: 915140

Strand: Direct

Name: yjbE

Synonym: L114402

Alternate gene names: 15672876

Gene position: 914709-915140 (Clockwise)

Preceding gene: 15672875

Following gene: 15672877

Centisome position: 38.67

GC content: 31.25

Gene sequence:

>432_bases
ATGGAGAAGAAAAGTCCTAAAATCGGTGATATTGTTGAGGTTGAAATTATTGGAATGCAAGATTATGGTGCATTTGTAAA
ATTTTACCTGGATAATTCATCAAATAAAGAAAAAATTGAACAAAAAGGATTGATTCATATTTCTGAAATTCAATCTGGTT
ATGTCAAAAGTATTCATGATATTGCTAAAATTGGCCAAAAAGTGATGGCACAAATTATTGATATTGACGAATATAATGGC
AAAATTAGCCTGTCAATTCGCAGTCTGGAAAAAAATCCGCAAGTTCACCATATTTACCGAAAAAAACATTTTACTGATTC
TCGGGATAAAATTGGCTTTAAAACCCTTGCTAATTATTTGCCAGGTTGGATTGAAGAAAATAAAGCCTACCTTAAAGCCA
AAAAAAATGCCCAAAGTGAGGATTTTCTTTGA

Upstream 100 bases:

>100_bases
TATAAAGTTCTCGATGAAATTGCAGCTGTTCGTGTAGGTGCGCAAGATAAACCAGTCGATGATGTCGTTATTGAATCAGT
TGAGATTATCGAGCCATAAT

Downstream 100 bases:

>100_bases
ATGATAACGTATTAAGATATATCAAACGAGTTTTTAATTTAATTACTATTCTTGGCTTTGTTGCGACAATTGTTGGTGGC
ATTTATTTATGGCGCCTTGG

Product: general stress protein GSP13

Products: NA

Alternate protein names: GSP13 [H]

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MEKKSPKIGDIVEVEIIGMQDYGAFVKFYLDNSSNKEKIEQKGLIHISEIQSGYVKSIHDIAKIGQKVMAQIIDIDEYNG
KISLSIRSLEKNPQVHHIYRKKHFTDSRDKIGFKTLANYLPGWIEENKAYLKAKKNAQSEDFL

Sequences:

>Translated_143_residues
MEKKSPKIGDIVEVEIIGMQDYGAFVKFYLDNSSNKEKIEQKGLIHISEIQSGYVKSIHDIAKIGQKVMAQIIDIDEYNG
KISLSIRSLEKNPQVHHIYRKKHFTDSRDKIGFKTLANYLPGWIEENKAYLKAKKNAQSEDFL
>Mature_143_residues
MEKKSPKIGDIVEVEIIGMQDYGAFVKFYLDNSSNKEKIEQKGLIHISEIQSGYVKSIHDIAKIGQKVMAQIIDIDEYNG
KISLSIRSLEKNPQVHHIYRKKHFTDSRDKIGFKTLANYLPGWIEENKAYLKAKKNAQSEDFL

Specific function: Unknown

COG id: COG1098

COG function: function code J; Predicted RNA binding protein (contains ribosomal protein S1 domain)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR000110
- InterPro:   IPR022967 [H]

Pfam domain/function: PF00575 S1 [H]

EC number: NA

Molecular weight: Translated: 16458; Mature: 16458

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKSPKIGDIVEVEIIGMQDYGAFVKFYLDNSSNKEKIEQKGLIHISEIQSGYVKSIHD
CCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCHHHHHHCCCEEEHHHHHHHHHHHHH
IAKIGQKVMAQIIDIDEYNGKISLSIRSLEKNPQVHHIYRKKHFTDSRDKIGFKTLANYL
HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHC
PGWIEENKAYLKAKKNAQSEDFL
CCHHHCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MEKKSPKIGDIVEVEIIGMQDYGAFVKFYLDNSSNKEKIEQKGLIHISEIQSGYVKSIHD
CCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCHHHHHHCCCEEEHHHHHHHHHHHHH
IAKIGQKVMAQIIDIDEYNGKISLSIRSLEKNPQVHHIYRKKHFTDSRDKIGFKTLANYL
HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHC
PGWIEENKAYLKAKKNAQSEDFL
CCHHHCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377; 9298659 [H]