Click here to switch to the map view.

The map label for this gene is yjbF

Identifier: 15672877

GI number: 15672877

Start: 915137

End: 915742

Strand: Direct

Name: yjbF

Synonym: L114884

Alternate gene names: NA

Gene position: 915137-915742 (Clockwise)

Preceding gene: 15672876

Following gene: 15672878

Centisome position: 38.69

GC content: 34.65

Gene sequence:

>606_bases
TTGAATGATAACGTATTAAGATATATCAAACGAGTTTTTAATTTAATTACTATTCTTGGCTTTGTTGCGACAATTGTTGG
TGGCATTTATTTATGGCGCCTTGGCGCATTTCAAAATCAAGCGGTCTTACAACAATTGATTGTGGCACATCGTTTTTTAG
GACCATTAATCTTCCTTTGTATGCAAATTTTGCAAGTCATTGTTCCAATCATACCAGGTGGGATTACAATGGCAGCAGGG
GTCATGATTTTTGGACCAGTTTGGGGTTTTGTTTATAATTACTTTGGAATTGTTGCGGGCTCTTTTTTACTTTTTCACTT
TGGTAAAAAATATGGTTCTTCATTAGCCAAAACTTTTGTCAAAGAAAAAACATATAATAAATACATGGCTTGGTTGGATA
AGGGGCAAAAACGCTTTAATATTGTTTTCGCGCTCCTCATTTTATCTCCTATTGCCCCAGATGATGCCCTTGTTTTAATA
GCAAGTCAAACAAAAATGAGTTGGAAATTCTTCACTTGGAGTATCTTATTATGTAAACCATTGCCAATTCTCCTCTATTC
TTATCTTTTGATTTTTGGAGGAGACCTTCTTGGGCACATTTTATAA

Upstream 100 bases:

>100_bases
AAATTGGCTTTAAAACCCTTGCTAATTATTTGCCAGGTTGGATTGAAGAAAATAAAGCCTACCTTAAAGCCAAAAAAAAT
GCCCAAAGTGAGGATTTTCT

Downstream 100 bases:

>100_bases
AATGCTGAAAGTGCTTCAGTGTTTTTTTATTGGAATTTTTGAGAAAGAATGCCCAAATCATCCAAAAAAATTGTATAATA
GAATGGATTTATGATATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: SNARE Associated Golgi Protein; Membrane-Associated Alkaline Phosphatase; SNARE Associated Golgi Protein-Related Protein; Immunoreactive -Like Protein; Snare Associated Golgi Protein; YdjX Protein; Ypothetical Protein SMU.

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MNDNVLRYIKRVFNLITILGFVATIVGGIYLWRLGAFQNQAVLQQLIVAHRFLGPLIFLCMQILQVIVPIIPGGITMAAG
VMIFGPVWGFVYNYFGIVAGSFLLFHFGKKYGSSLAKTFVKEKTYNKYMAWLDKGQKRFNIVFALLILSPIAPDDALVLI
ASQTKMSWKFFTWSILLCKPLPILLYSYLLIFGGDLLGHIL

Sequences:

>Translated_201_residues
MNDNVLRYIKRVFNLITILGFVATIVGGIYLWRLGAFQNQAVLQQLIVAHRFLGPLIFLCMQILQVIVPIIPGGITMAAG
VMIFGPVWGFVYNYFGIVAGSFLLFHFGKKYGSSLAKTFVKEKTYNKYMAWLDKGQKRFNIVFALLILSPIAPDDALVLI
ASQTKMSWKFFTWSILLCKPLPILLYSYLLIFGGDLLGHIL
>Mature_201_residues
MNDNVLRYIKRVFNLITILGFVATIVGGIYLWRLGAFQNQAVLQQLIVAHRFLGPLIFLCMQILQVIVPIIPGGITMAAG
VMIFGPVWGFVYNYFGIVAGSFLLFHFGKKYGSSLAKTFVKEKTYNKYMAWLDKGQKRFNIVFALLILSPIAPDDALVLI
ASQTKMSWKFFTWSILLCKPLPILLYSYLLIFGGDLLGHIL

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22676; Mature: 22676

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDNVLRYIKRVFNLITILGFVATIVGGIYLWRLGAFQNQAVLQQLIVAHRFLGPLIFLC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
MQILQVIVPIIPGGITMAAGVMIFGPVWGFVYNYFGIVAGSFLLFHFGKKYGSSLAKTFV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEKTYNKYMAWLDKGQKRFNIVFALLILSPIAPDDALVLIASQTKMSWKFFTWSILLCKP
HHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCC
LPILLYSYLLIFGGDLLGHIL
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNDNVLRYIKRVFNLITILGFVATIVGGIYLWRLGAFQNQAVLQQLIVAHRFLGPLIFLC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
MQILQVIVPIIPGGITMAAGVMIFGPVWGFVYNYFGIVAGSFLLFHFGKKYGSSLAKTFV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEKTYNKYMAWLDKGQKRFNIVFALLILSPIAPDDALVLIASQTKMSWKFFTWSILLCKP
HHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCC
LPILLYSYLLIFGGDLLGHIL
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA