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The map label for this gene is yibC

Identifier: 15672787

GI number: 15672787

Start: 813912

End: 816080

Strand: Direct

Name: yibC

Synonym: L13927

Alternate gene names: 15672787

Gene position: 813912-816080 (Clockwise)

Preceding gene: 15672786

Following gene: 15672788

Centisome position: 34.41

GC content: 34.81

Gene sequence:

>2169_bases
ATGAGTATATTTTCTGGGGATAATAAATTGAAAAAATTACTATCTGCTTTCAACACACGTGTTGGTTTGCTTAGTTTTAT
TGTATTTTTTGTATGGGTAAAATCGATGATTGCCTACTTTGGAGTTTTTAATCTTCGCGGAGTTGGTCCAGCAGAATTAT
TGCTGATGATTATTAACCCAATTGGTTTTACAGCTATTTGTTTTGCTGTTTTACTCTTTATTAGAAGAACTTCGCTTTTC
TATTTAGCGACACTGGTCTTAACGATAGCTGCAAACTTTTTGCTCTATCTTAATATTCTCTATTATCGAGAATTCACCGA
TTTCATCACGATTGATACGATGACTGGTGGGGCCGGAATGTTCCAACATGGTTTTGATTTTGGCTCGGTGCCTGTTCATT
TGATGGACTGGGTTTATTGGATTGACCTTGTAGTCATTATTGTTTTATTGATTGCTAAAAAAATGAAATTCGACCAACGA
CCGGTTGGTGCGAAAAGAGCATTTACTTATTTTTCAATGGGTTTGGCTTTGTTTGGGTTGAATTTCTGGTTTGGAGATTT
TAATAAACACCAATTGATTTTGCGTAAGGCCCAATCAGATAAAACCTATATTGTTCGATATCTTGGCTTAGGCCCATGGA
TGTTAACAGACGGTTATTATACGAATTTAGCAAATACGCAACGGAAAGATGCCAGCAAAGAAAGGTTGCAAGAAATTCAA
AAATACATTGCTTCAAATCGTTATTTAGCACCGAACTTGAAAATGTATGGAATTGCTAAAAACCGCAATGTTATTGAGAT
TCACTTGGAATCTTTCCAACAAGCATTGATTGATTTGAAAATTAAAGGAACAGACGGAAAAGAACATGTTGTTACGCCTT
TCCTAAATTCAATCTATCATTCAAATTCGACTTACTCATTCAGTAATTTCTTCAATCAGGTTGGACAAGGAAAAACTTCT
GATGCCGAAAATCTATTGGAAACATCAACATTTGGTTTACCAGCTGGCTCACTTTTTGCCAAATATGGTTCAACCCAAAC
TTTCCAAGCAATGCCGGCTATCTTGAATCAAACCGATGGTTATAGTTCAGCTGTGGTTCATGGGAATGTTGGTGCTTTCT
ATAATCGATTGAATACATACAAACAAATGGGTTATCAAAACTTCTTTGACCAAAGTTTTTTTGATAATTCCGCATCAAAT
ATGAGTCCTTGGGGAATTAAAGATAAATTACTCTTCCGTGATTCTGTACCATTGCTTGAACAAATGCAACAACCTTTCTA
TGTTAAGTATTTGACAGTTACAAATCACTTAACATATACAATGGATGATGAAGACAAAGATCCGAACTTTGCAACTGTTG
ATTCAGGGAATAAATTAGTTGACGGTTACTTTGAAACGGCTCATTACTTAGACCAAGCAGTTCAACAATTTTATGATTAT
TTGAAGAAATCTGGCTTATACGATAAATCAATTATTGTGTTATATGGTGATCACTACGGAATTTCTGGTAGTGATAATAA
GGCATTTGCGCCTTATGTTGGCTATAATGCTGATACTTTCAATAGTTACGATAGTACAATGTTACAAAGAACACCATTCA
TGGTAGATATTCCTGGACAAACAAATGGTCATATTATCAATACTTATGTTGGTCAACTTGATGTTATGCCAACGCTTGAG
CATTTACTTGGGATTGATACGAAAAAATATGTACAGTTTGGTCAAGATATGTTTGCTTCTGGTCGTCAAGATTTTGTTGC
TCTAAGAAATGGTGGATTTGTTACTCCAACCATTACTCAACCAAGTTTGAATGGAAACTATTATGATACTCAAACGGGCT
TGCAGATTGAAAAACTTAATGCTCAGCAAGAACAATATGTTAAAGAAACCAAGCAAAAAGTTTCTGATCTCTTAAAAGCA
TCTGATAAATTAAATAATCAAAATCTCCTCAGGTTCTATACGCCAGAAGGCTTTAAAGCTGTTGACCCTAAAGATTACAA
CTATACGGTCAAGGCAACCGAGAAGAGACTGAAGAAAGAAAATGAAGATTTAGCAGCTAGATCAAATAGTTTACTTAGTC
AAAATCAAGGAAAATCAACTTTACCAGATTATTCGGTTGAAATTCCAGAAGTTGAAAAAGGACAAGATTCACCAAAGGTG
AAAGATTAA

Upstream 100 bases:

>100_bases
TTTCATTAATTAAAAAAATAATGAAATTGGCGTTTTTCGTATTCATTAATAAGTTTTATATTAATGAATTGACTGCAGTT
TTTCTTTAAATTAAGGAAGA

Downstream 100 bases:

>100_bases
TAAAAATAAGATAAGTTACTGACAAAATGTTTCAAAATGAGTTAATCTAATTTTGAGGCTGGTCAGCACTTTATATTAAG
AGAGGAACCAATGAAAACAG

Product: hypothetical protein

Products: NA

Alternate protein names: LTA synthase 1; Polyglycerol phosphate synthase 1 [H]

Number of amino acids: Translated: 722; Mature: 721

Protein sequence:

>722_residues
MSIFSGDNKLKKLLSAFNTRVGLLSFIVFFVWVKSMIAYFGVFNLRGVGPAELLLMIINPIGFTAICFAVLLFIRRTSLF
YLATLVLTIAANFLLYLNILYYREFTDFITIDTMTGGAGMFQHGFDFGSVPVHLMDWVYWIDLVVIIVLLIAKKMKFDQR
PVGAKRAFTYFSMGLALFGLNFWFGDFNKHQLILRKAQSDKTYIVRYLGLGPWMLTDGYYTNLANTQRKDASKERLQEIQ
KYIASNRYLAPNLKMYGIAKNRNVIEIHLESFQQALIDLKIKGTDGKEHVVTPFLNSIYHSNSTYSFSNFFNQVGQGKTS
DAENLLETSTFGLPAGSLFAKYGSTQTFQAMPAILNQTDGYSSAVVHGNVGAFYNRLNTYKQMGYQNFFDQSFFDNSASN
MSPWGIKDKLLFRDSVPLLEQMQQPFYVKYLTVTNHLTYTMDDEDKDPNFATVDSGNKLVDGYFETAHYLDQAVQQFYDY
LKKSGLYDKSIIVLYGDHYGISGSDNKAFAPYVGYNADTFNSYDSTMLQRTPFMVDIPGQTNGHIINTYVGQLDVMPTLE
HLLGIDTKKYVQFGQDMFASGRQDFVALRNGGFVTPTITQPSLNGNYYDTQTGLQIEKLNAQQEQYVKETKQKVSDLLKA
SDKLNNQNLLRFYTPEGFKAVDPKDYNYTVKATEKRLKKENEDLAARSNSLLSQNQGKSTLPDYSVEIPEVEKGQDSPKV
KD

Sequences:

>Translated_722_residues
MSIFSGDNKLKKLLSAFNTRVGLLSFIVFFVWVKSMIAYFGVFNLRGVGPAELLLMIINPIGFTAICFAVLLFIRRTSLF
YLATLVLTIAANFLLYLNILYYREFTDFITIDTMTGGAGMFQHGFDFGSVPVHLMDWVYWIDLVVIIVLLIAKKMKFDQR
PVGAKRAFTYFSMGLALFGLNFWFGDFNKHQLILRKAQSDKTYIVRYLGLGPWMLTDGYYTNLANTQRKDASKERLQEIQ
KYIASNRYLAPNLKMYGIAKNRNVIEIHLESFQQALIDLKIKGTDGKEHVVTPFLNSIYHSNSTYSFSNFFNQVGQGKTS
DAENLLETSTFGLPAGSLFAKYGSTQTFQAMPAILNQTDGYSSAVVHGNVGAFYNRLNTYKQMGYQNFFDQSFFDNSASN
MSPWGIKDKLLFRDSVPLLEQMQQPFYVKYLTVTNHLTYTMDDEDKDPNFATVDSGNKLVDGYFETAHYLDQAVQQFYDY
LKKSGLYDKSIIVLYGDHYGISGSDNKAFAPYVGYNADTFNSYDSTMLQRTPFMVDIPGQTNGHIINTYVGQLDVMPTLE
HLLGIDTKKYVQFGQDMFASGRQDFVALRNGGFVTPTITQPSLNGNYYDTQTGLQIEKLNAQQEQYVKETKQKVSDLLKA
SDKLNNQNLLRFYTPEGFKAVDPKDYNYTVKATEKRLKKENEDLAARSNSLLSQNQGKSTLPDYSVEIPEVEKGQDSPKV
KD
>Mature_721_residues
SIFSGDNKLKKLLSAFNTRVGLLSFIVFFVWVKSMIAYFGVFNLRGVGPAELLLMIINPIGFTAICFAVLLFIRRTSLFY
LATLVLTIAANFLLYLNILYYREFTDFITIDTMTGGAGMFQHGFDFGSVPVHLMDWVYWIDLVVIIVLLIAKKMKFDQRP
VGAKRAFTYFSMGLALFGLNFWFGDFNKHQLILRKAQSDKTYIVRYLGLGPWMLTDGYYTNLANTQRKDASKERLQEIQK
YIASNRYLAPNLKMYGIAKNRNVIEIHLESFQQALIDLKIKGTDGKEHVVTPFLNSIYHSNSTYSFSNFFNQVGQGKTSD
AENLLETSTFGLPAGSLFAKYGSTQTFQAMPAILNQTDGYSSAVVHGNVGAFYNRLNTYKQMGYQNFFDQSFFDNSASNM
SPWGIKDKLLFRDSVPLLEQMQQPFYVKYLTVTNHLTYTMDDEDKDPNFATVDSGNKLVDGYFETAHYLDQAVQQFYDYL
KKSGLYDKSIIVLYGDHYGISGSDNKAFAPYVGYNADTFNSYDSTMLQRTPFMVDIPGQTNGHIINTYVGQLDVMPTLEH
LLGIDTKKYVQFGQDMFASGRQDFVALRNGGFVTPTITQPSLNGNYYDTQTGLQIEKLNAQQEQYVKETKQKVSDLLKAS
DKLNNQNLLRFYTPEGFKAVDPKDYNYTVKATEKRLKKENEDLAARSNSLLSQNQGKSTLPDYSVEIPEVEKGQDSPKVK
D

Specific function: Catalyzes the polymerization of lipoteichoic acid (LTA) polyglycerol phosphate, a reaction that presumably uses phosphatidylglycerol (PG) as substrate [H]

COG id: COG1368

COG function: function code M; Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily

Gene ontology:

Cell location: Processed glycerol phosphate lipoteichoic acid synthase 1:Secreted. Note=The secretion into the extracellular medium is dependent on secA and ffh [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LTA synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR012160
- InterPro:   IPR000917 [H]

Pfam domain/function: PF00884 Sulfatase [H]

EC number: NA

Molecular weight: Translated: 82029; Mature: 81898

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIFSGDNKLKKLLSAFNTRVGLLSFIVFFVWVKSMIAYFGVFNLRGVGPAELLLMIINP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
IGFTAICFAVLLFIRRTSLFYLATLVLTIAANFLLYLNILYYREFTDFITIDTMTGGAGM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCH
FQHGFDFGSVPVHLMDWVYWIDLVVIIVLLIAKKMKFDQRPVGAKRAFTYFSMGLALFGL
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
NFWFGDFNKHQLILRKAQSDKTYIVRYLGLGPWMLTDGYYTNLANTQRKDASKERLQEIQ
HHHCCCCCCHHHHEECCCCCCEEEEEEECCCCEEECCCCCCCCCCCHHHCHHHHHHHHHH
KYIASNRYLAPNLKMYGIAKNRNVIEIHLESFQQALIDLKIKGTDGKEHVVTPFLNSIYH
HHHHCCCEECCCCEEEEEECCCCEEEEEHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHC
SNSTYSFSNFFNQVGQGKTSDAENLLETSTFGLPAGSLFAKYGSTQTFQAMPAILNQTDG
CCCCEEHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCC
YSSAVVHGNVGAFYNRLNTYKQMGYQNFFDQSFFDNSASNMSPWGIKDKLLFRDSVPLLE
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHH
QMQQPFYVKYLTVTNHLTYTMDDEDKDPNFATVDSGNKLVDGYFETAHYLDQAVQQFYDY
HCCCCEEEEEEEEECCEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
LKKSGLYDKSIIVLYGDHYGISGSDNKAFAPYVGYNADTFNSYDSTMLQRTPFMVDIPGQ
HHHCCCCCCEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHCCCEEEECCCC
TNGHIINTYVGQLDVMPTLEHLLGIDTKKYVQFGQDMFASGRQDFVALRNGGFVTPTITQ
CCCEEEEEECCCEECHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEECEECC
PSLNGNYYDTQTGLQIEKLNAQQEQYVKETKQKVSDLLKASDKLNNQNLLRFYTPEGFKA
CCCCCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEE
VDPKDYNYTVKATEKRLKKENEDLAARSNSLLSQNQGKSTLPDYSVEIPEVEKGQDSPKV
CCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCC
KD
CC
>Mature Secondary Structure 
SIFSGDNKLKKLLSAFNTRVGLLSFIVFFVWVKSMIAYFGVFNLRGVGPAELLLMIINP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
IGFTAICFAVLLFIRRTSLFYLATLVLTIAANFLLYLNILYYREFTDFITIDTMTGGAGM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCH
FQHGFDFGSVPVHLMDWVYWIDLVVIIVLLIAKKMKFDQRPVGAKRAFTYFSMGLALFGL
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
NFWFGDFNKHQLILRKAQSDKTYIVRYLGLGPWMLTDGYYTNLANTQRKDASKERLQEIQ
HHHCCCCCCHHHHEECCCCCCEEEEEEECCCCEEECCCCCCCCCCCHHHCHHHHHHHHHH
KYIASNRYLAPNLKMYGIAKNRNVIEIHLESFQQALIDLKIKGTDGKEHVVTPFLNSIYH
HHHHCCCEECCCCEEEEEECCCCEEEEEHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHC
SNSTYSFSNFFNQVGQGKTSDAENLLETSTFGLPAGSLFAKYGSTQTFQAMPAILNQTDG
CCCCEEHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCC
YSSAVVHGNVGAFYNRLNTYKQMGYQNFFDQSFFDNSASNMSPWGIKDKLLFRDSVPLLE
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHH
QMQQPFYVKYLTVTNHLTYTMDDEDKDPNFATVDSGNKLVDGYFETAHYLDQAVQQFYDY
HCCCCEEEEEEEEECCEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
LKKSGLYDKSIIVLYGDHYGISGSDNKAFAPYVGYNADTFNSYDSTMLQRTPFMVDIPGQ
HHHCCCCCCEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHCCCEEEECCCC
TNGHIINTYVGQLDVMPTLEHLLGIDTKKYVQFGQDMFASGRQDFVALRNGGFVTPTITQ
CCCEEEEEECCCEECHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEECEECC
PSLNGNYYDTQTGLQIEKLNAQQEQYVKETKQKVSDLLKASDKLNNQNLLRFYTPEGFKA
CCCCCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEE
VDPKDYNYTVKATEKRLKKENEDLAARSNSLLSQNQGKSTLPDYSVEIPEVEKGQDSPKV
CCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCC
KD
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377; 10658653 [H]