Click here to switch to the map view.

The map label for this gene is icaC

Identifier: 15672666

GI number: 15672666

Start: 683636

End: 684646

Strand: Direct

Name: icaC

Synonym: L83620

Alternate gene names: 15672666

Gene position: 683636-684646 (Clockwise)

Preceding gene: 15672665

Following gene: 15672669

Centisome position: 28.9

GC content: 34.92

Gene sequence:

>1011_bases
ATGAGTGTCAATGTTCCTGATTTATTAACTTTATCAAAAGATATTACTTTTGAAATAAAAGATGAAGCTGGAAATATTAT
CGGAACGGCGGTTGCCAATCATCTTACGGGGGTGGTAACTGTTACTTTTTTAAAACTTGTTGAAAATGCAACTTCAGACA
TTAAAGGTTCATTTTCCGTTTGGGTTAATTGGGATGAACAAAAAGTAGAGGAAGACACAAGGGTAGTAGTTGATTGGAAA
GATGGAGGAACAACAGAGGTTAACATTGGTCCGGCAACAGGACCGGATAAAGATGAGGTACTTTATAAATGGGGATGGGT
TGACGAGAATGATTCAACCTTAATTCATTGGCAGGTTCGGATCAATTATGCTAAAGAAAATATCCAGAAAGCTATTTATA
CTGATATTATTGGTGGGAATCAGAATTTAGTTTCTGGTTCGATTTCGGTAGCTAATGTGACTTATAGTAGTGATGGAGAG
AATTATAATGTTGATAGCTATTATCCTCAAGCTAGTATTTTAGAAAATGGCGTGAACGGATTTACCGTGAATTTAGGTGA
TATTTCAAATACGATTATTATCGATTATTCAACGAGGGCAACGGATGGAGGGCTTTCTCAACAGTATGAAAATAGAGGAG
AATTGACGGGAGAAAATATTGAAAAACAGGTAGTAGAAGTTCATACTCCTAACAATGGTGGAAATGGAAATGCAAGTATG
AAACTTTCTATTTCTGGAGAGAAAACTTGGATTAATGACAATAATGCACGTGGTTTAAGACCAAGTTTTATTAGTATTGA
GTTATATCGGAATGGAGAGAAAGTTGATTCACGAGATGTGACGGCTAAAGAAAATTGGAAATATTCGTTTACCAATTTGG
ATAAGTATGATGAAAGTGGGAAACTTTACGATTATGATGTAAAAGAGGTGTCTGTTAGTAATTACACGAGTCAACAAGAG
GGGTATAATTTTATAAATACAATCATCCCTGTTAAAGAAGAAACTCCTTAA

Upstream 100 bases:

>100_bases
ATGATTTGGGAAATCCGAAAACAGATTTTGGTATTTATGATGATGTTCAGGCTCATTGGGATTTTGATATTCCAGTGGGA
AGCGTTTCTCAGGGGATACA

Downstream 100 bases:

>100_bases
AAACCCGACCAATCAATTACTACTCCTAGTTCATCCTCACAAGTAATGTCGGTTTCGTCTTCTTCAATGGAATCAGAAAC
ATCTGAAGAGTTTCCTAAAA

Product: collagen adhesin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MSVNVPDLLTLSKDITFEIKDEAGNIIGTAVANHLTGVVTVTFLKLVENATSDIKGSFSVWVNWDEQKVEEDTRVVVDWK
DGGTTEVNIGPATGPDKDEVLYKWGWVDENDSTLIHWQVRINYAKENIQKAIYTDIIGGNQNLVSGSISVANVTYSSDGE
NYNVDSYYPQASILENGVNGFTVNLGDISNTIIIDYSTRATDGGLSQQYENRGELTGENIEKQVVEVHTPNNGGNGNASM
KLSISGEKTWINDNNARGLRPSFISIELYRNGEKVDSRDVTAKENWKYSFTNLDKYDESGKLYDYDVKEVSVSNYTSQQE
GYNFINTIIPVKEETP

Sequences:

>Translated_336_residues
MSVNVPDLLTLSKDITFEIKDEAGNIIGTAVANHLTGVVTVTFLKLVENATSDIKGSFSVWVNWDEQKVEEDTRVVVDWK
DGGTTEVNIGPATGPDKDEVLYKWGWVDENDSTLIHWQVRINYAKENIQKAIYTDIIGGNQNLVSGSISVANVTYSSDGE
NYNVDSYYPQASILENGVNGFTVNLGDISNTIIIDYSTRATDGGLSQQYENRGELTGENIEKQVVEVHTPNNGGNGNASM
KLSISGEKTWINDNNARGLRPSFISIELYRNGEKVDSRDVTAKENWKYSFTNLDKYDESGKLYDYDVKEVSVSNYTSQQE
GYNFINTIIPVKEETP
>Mature_335_residues
SVNVPDLLTLSKDITFEIKDEAGNIIGTAVANHLTGVVTVTFLKLVENATSDIKGSFSVWVNWDEQKVEEDTRVVVDWKD
GGTTEVNIGPATGPDKDEVLYKWGWVDENDSTLIHWQVRINYAKENIQKAIYTDIIGGNQNLVSGSISVANVTYSSDGEN
YNVDSYYPQASILENGVNGFTVNLGDISNTIIIDYSTRATDGGLSQQYENRGELTGENIEKQVVEVHTPNNGGNGNASMK
LSISGEKTWINDNNARGLRPSFISIELYRNGEKVDSRDVTAKENWKYSFTNLDKYDESGKLYDYDVKEVSVSNYTSQQEG
YNFINTIIPVKEETP

Specific function: Mediates attachment of staphylococcal cells to collagen- containing substrata [H]

COG id: COG4932

COG function: function code M; Predicted outer membrane protein

Gene ontology:

Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR008456
- InterPro:   IPR008454
- InterPro:   IPR008970
- InterPro:   IPR019931 [H]

Pfam domain/function: PF05738 Cna_B; PF05737 Collagen_bind [H]

EC number: NA

Molecular weight: Translated: 37346; Mature: 37215

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVNVPDLLTLSKDITFEIKDEAGNIIGTAVANHLTGVVTVTFLKLVENATSDIKGSFSV
CCCCCCCCEEECCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
WVNWDEQKVEEDTRVVVDWKDGGTTEVNIGPATGPDKDEVLYKWGWVDENDSTLIHWQVR
EEECCHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCEEEEEEEE
INYAKENIQKAIYTDIIGGNQNLVSGSISVANVTYSSDGENYNVDSYYPQASILENGVNG
EEECHHHHHHHHHHHCCCCCCCEEECCEEEEEEEECCCCCCCCCCCCCCCHHHHHCCCCE
FTVNLGDISNTIIIDYSTRATDGGLSQQYENRGELTGENIEKQVVEVHTPNNGGNGNASM
EEEEECCCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCEEE
KLSISGEKTWINDNNARGLRPSFISIELYRNGEKVDSRDVTAKENWKYSFTNLDKYDESG
EEEECCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCC
KLYDYDVKEVSVSNYTSQQEGYNFINTIIPVKEETP
CEEEECHHEEEECCCCCHHCCCEEEHEEEEECCCCC
>Mature Secondary Structure 
SVNVPDLLTLSKDITFEIKDEAGNIIGTAVANHLTGVVTVTFLKLVENATSDIKGSFSV
CCCCCCCEEECCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
WVNWDEQKVEEDTRVVVDWKDGGTTEVNIGPATGPDKDEVLYKWGWVDENDSTLIHWQVR
EEECCHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCEEEEEEEE
INYAKENIQKAIYTDIIGGNQNLVSGSISVANVTYSSDGENYNVDSYYPQASILENGVNG
EEECHHHHHHHHHHHCCCCCCCEEECCEEEEEEEECCCCCCCCCCCCCCCHHHHHCCCCE
FTVNLGDISNTIIIDYSTRATDGGLSQQYENRGELTGENIEKQVVEVHTPNNGGNGNASM
EEEEECCCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCEEE
KLSISGEKTWINDNNARGLRPSFISIELYRNGEKVDSRDVTAKENWKYSFTNLDKYDESG
EEEECCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCC
KLYDYDVKEVSVSNYTSQQEGYNFINTIIPVKEETP
CEEEECHHEEEECCCCCHHCCCEEEHEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1311320; 8218209; 9334749 [H]