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The map label for this gene is gatC

Identifier: 15672144

GI number: 15672144

Start: 165330

End: 165635

Strand: Direct

Name: gatC

Synonym: L0475

Alternate gene names: 15672144

Gene position: 165330-165635 (Clockwise)

Preceding gene: 15672143

Following gene: 15672145

Centisome position: 6.99

GC content: 39.54

Gene sequence:

>306_bases
ATGAGTCAAATTACAGAGGAACAAGTCAAGCACGTGGCGCTTTTGTCAAAGCTTGAATTCTCGGAAAATGAAGTAAAATC
ATTTACCGATACTTTTGGAAAAATCATTGATATGGTTGAAATGTTAGATGAAGTTGATGGTGAAGGTGTCCCATTTACTA
TGAATGTGGCAGATAATCTCAACTTCATGCGTGAAGATGTGGCAGAAAAAGGACTTGACCGTGAAAAACTCATGGCAGCC
GTTCCTGAAAAGGAAGACGGCTTTATCAAAGTTCCAGCAATGCTTTCTGATGGAGGAGATGCTTAA

Upstream 100 bases:

>100_bases
AATGACTGGTAAATGGTTTAAAATCACTGACAGACTGTTAAAATGCCGATTTTTTGTTATAATTAACAAGAATAAACTCT
AAAAAATGGAGATTGAAAAT

Downstream 100 bases:

>100_bases
TGTCATACAATAACAAATCAATCAAAGAGCTTCATGAGCTACTTGTAAATAAAGAAATTTCTGCTCTTGAACTGACAAAA
GCAACGCTTTCTGATATTTC

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Glu-ADT subunit C

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MSQITEEQVKHVALLSKLEFSENEVKSFTDTFGKIIDMVEMLDEVDGEGVPFTMNVADNLNFMREDVAEKGLDREKLMAA
VPEKEDGFIKVPAMLSDGGDA

Sequences:

>Translated_101_residues
MSQITEEQVKHVALLSKLEFSENEVKSFTDTFGKIIDMVEMLDEVDGEGVPFTMNVADNLNFMREDVAEKGLDREKLMAA
VPEKEDGFIKVPAMLSDGGDA
>Mature_100_residues
SQITEEQVKHVALLSKLEFSENEVKSFTDTFGKIIDMVEMLDEVDGEGVPFTMNVADNLNFMREDVAEKGLDREKLMAAV
PEKEDGFIKVPAMLSDGGDA

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_LACLA (Q9CJ44)

Other databases:

- EMBL:   AE005176
- PIR:   B86645
- RefSeq:   NP_266318.1
- ProteinModelPortal:   Q9CJ44
- SMR:   Q9CJ44
- GeneID:   1113770
- GenomeReviews:   AE005176_GR
- KEGG:   lla:L0475
- NMPDR:   fig|272623.1.peg.169
- HOGENOM:   HBG586403
- OMA:   KDVAYIA
- ProtClustDB:   PRK00034
- BioCyc:   LLAC272623:L0475-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 11214; Mature: 11083

Theoretical pI: Translated: 4.00; Mature: 4.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.9 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQITEEQVKHVALLSKLEFSENEVKSFTDTFGKIIDMVEMLDEVDGEGVPFTMNVADNL
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHH
NFMREDVAEKGLDREKLMAAVPEKEDGFIKVPAMLSDGGDA
HHHHHHHHHCCCCHHHHHHHCCCCCCCEEECCEECCCCCCC
>Mature Secondary Structure 
SQITEEQVKHVALLSKLEFSENEVKSFTDTFGKIIDMVEMLDEVDGEGVPFTMNVADNL
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHH
NFMREDVAEKGLDREKLMAAVPEKEDGFIKVPAMLSDGGDA
HHHHHHHHHCCCCHHHHHHHCCCCCCCEEECCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471