| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
Click here to switch to the map view.
The map label for this gene is ps122
Identifier: 15672028
GI number: 15672028
Start: 47988
End: 48293
Strand: Direct
Name: ps122
Synonym: L47979
Alternate gene names: NA
Gene position: 47988-48293 (Clockwise)
Preceding gene: 30023972
Following gene: 15672029
Centisome position: 2.03
GC content: 33.66
Gene sequence:
>306_bases ATGGCAGACAATGATAAAACATCTCAAATAAAATTAGATTTTTTAAATACACTTTATAATCTTATCCTTAGTGAGGATAT AAAAGAAGAAGAACGTAGAGTGCTGACTAAAGCAAAGAATCTAGTAGAAAAAGGAGAGTATATTCCCAATGTCATCAGAC GTATGCAGACAAATTTTACGTTGGATGCCATAAATAGTAACTTATCTCCAAGTGTGAGTGAGTTTTATAGTACATTGCCT AAAATACTTGCAGAGATTCTACCAGCATTTCCAGGTACTGGCTCTAGTTTAGGGATTCCTCTCTAA
Upstream 100 bases:
>100_bases CCCTTTTTCCACCAATTCCATAAGTAAATTATTGAATCTTTTTTACTTAACCCCAATACGTGCAAACCTGAACCACGTTA AAAGCTGATAGGAGGTATTT
Downstream 100 bases:
>100_bases TTATCTTGTTACCCTTGATACCTTACTGTTACTCTTCTTTTAGAGAAAGGTAACAGTATAAACCCTTGATATAACTACCT TTATAATACTTTGTTACTCT
Product: prophage ps1 protein 22
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MADNDKTSQIKLDFLNTLYNLILSEDIKEEERRVLTKAKNLVEKGEYIPNVIRRMQTNFTLDAINSNLSPSVSEFYSTLP KILAEILPAFPGTGSSLGIPL
Sequences:
>Translated_101_residues MADNDKTSQIKLDFLNTLYNLILSEDIKEEERRVLTKAKNLVEKGEYIPNVIRRMQTNFTLDAINSNLSPSVSEFYSTLP KILAEILPAFPGTGSSLGIPL >Mature_100_residues ADNDKTSQIKLDFLNTLYNLILSEDIKEEERRVLTKAKNLVEKGEYIPNVIRRMQTNFTLDAINSNLSPSVSEFYSTLPK ILAEILPAFPGTGSSLGIPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11315; Mature: 11184
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADNDKTSQIKLDFLNTLYNLILSEDIKEEERRVLTKAKNLVEKGEYIPNVIRRMQTNFT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCH LDAINSNLSPSVSEFYSTLPKILAEILPAFPGTGSSLGIPL HHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure ADNDKTSQIKLDFLNTLYNLILSEDIKEEERRVLTKAKNLVEKGEYIPNVIRRMQTNFT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCH LDAINSNLSPSVSEFYSTLPKILAEILPAFPGTGSSLGIPL HHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA