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The map label for this gene is ps123

Identifier: 15672029

GI number: 15672029

Start: 48543

End: 49727

Strand: Direct

Name: ps123

Synonym: L48477

Alternate gene names: 15672029

Gene position: 48543-49727 (Clockwise)

Preceding gene: 15672028

Following gene: 15672030

Centisome position: 2.05

GC content: 36.71

Gene sequence:

>1185_bases
ATGAATATTAAAGAATATACAAAAAAAGACGGTACAAAGGTGTACCGCGCTAATGTTTATCTGGGGGTTGATTCTCTAAC
TGGTAAGCAAGTGAGAAAAGTTATAACGGCTAAATCTGAAAAGATGTGTAATACAAAAATAAGTAGAGCTATTAATGAGT
TTGAAAAGAACGGCCAAACAGTCAGAAAAGTAAGTGTAGATGATTTTAAAGATATTGCCATGCTGTGGTTTGATAGTTAT
AAGCTAGGGGTAAAACCTCGAACAGTTCAAATCATGCAGACACGCTTAAATAATTATGTTTTGCCAGCTCTTGGAGAGTA
TAGAATAGATAAAGTAAATTCTATTATTCTTCAGCAAATTGTTAATCAATGGATGATTAATGCTAGTCAACCATTAAATG
GGGCTTACCACAGACCAAAAGGAAAAGGCAAAGACTTCAAAATATACTTTAATATCGTTGAGCGTATTTTTAAGCATGCC
TTATCTCTTGGGCTAGTTAAAGATAACCCTTGTGTTAATGTTATTGTACCAAAAGTAAGACTTGAAAGCACCGAAAAGAA
AGTAAAACATCTTACAGCGGAGCAACTGAAAATATTTTTTGAGTATATTGGAGCACTACCCAAAGAGAAATATACTAATG
AGCTGATGACTGGACTTTGTCGTTTGCTTGTTGCCTCCGGTTTGCGTATTGGGGAAGCTGTGGCCTTGTCATGGTCTGAT
ATTGACTTTAAGACAGGTTCTGTGTCTGTCAGTAAAACAACGCTTAGAGCGGTCATACAATCAACCCCAAAGACTGACAA
AAGTAATAGGATTGTTTTAATAGACAGCAAAGCAGTAGAAGTTTTAAAGCATTGGGAACTATTTCAAGCGAAATACTTCA
TGAGTATTGGAAAGGGAAAGCAAGAACTGGTATTTCCCAACCGAACAGGAGGGGTGTTGGACTATCAGACAATGAGGCCA
TTCTTAATAAAATGGTTGAGAGCCTGCCAGCTACCACAAGTTGGCTTTCATGGTTTTAGACATTCTCATGCTAGCCTTCT
ACTTAATGCTGATGTTCCCTATAAAGAGATACAAGAACGCTTAGGACACGCAAGCATAAAAATGACTATGGACACATACA
GCCACCTTGAATCTGACAATAAAATAAAAGCAGTTGAACGCTTTGAATCAATTGTAAATTTCTAG

Upstream 100 bases:

>100_bases
ACTAATAAACCAGTTAACTAAATATCTCTAATAAAAATATTTCTCAATCCTCGTACATGCCTTGCCTGACATTAGTACAA
AATGGAAAGGAAGAAATAAT

Downstream 100 bases:

>100_bases
TAAAAAAATGCTACTCGTAATAAATCTCGTAATAAATTTAGCTTTTTTAAAAAACAAAATCTCTACAACGTAGATATACC
AGTATTTAACGAGGTTTTTC

Product: integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MNIKEYTKKDGTKVYRANVYLGVDSLTGKQVRKVITAKSEKMCNTKISRAINEFEKNGQTVRKVSVDDFKDIAMLWFDSY
KLGVKPRTVQIMQTRLNNYVLPALGEYRIDKVNSIILQQIVNQWMINASQPLNGAYHRPKGKGKDFKIYFNIVERIFKHA
LSLGLVKDNPCVNVIVPKVRLESTEKKVKHLTAEQLKIFFEYIGALPKEKYTNELMTGLCRLLVASGLRIGEAVALSWSD
IDFKTGSVSVSKTTLRAVIQSTPKTDKSNRIVLIDSKAVEVLKHWELFQAKYFMSIGKGKQELVFPNRTGGVLDYQTMRP
FLIKWLRACQLPQVGFHGFRHSHASLLLNADVPYKEIQERLGHASIKMTMDTYSHLESDNKIKAVERFESIVNF

Sequences:

>Translated_394_residues
MNIKEYTKKDGTKVYRANVYLGVDSLTGKQVRKVITAKSEKMCNTKISRAINEFEKNGQTVRKVSVDDFKDIAMLWFDSY
KLGVKPRTVQIMQTRLNNYVLPALGEYRIDKVNSIILQQIVNQWMINASQPLNGAYHRPKGKGKDFKIYFNIVERIFKHA
LSLGLVKDNPCVNVIVPKVRLESTEKKVKHLTAEQLKIFFEYIGALPKEKYTNELMTGLCRLLVASGLRIGEAVALSWSD
IDFKTGSVSVSKTTLRAVIQSTPKTDKSNRIVLIDSKAVEVLKHWELFQAKYFMSIGKGKQELVFPNRTGGVLDYQTMRP
FLIKWLRACQLPQVGFHGFRHSHASLLLNADVPYKEIQERLGHASIKMTMDTYSHLESDNKIKAVERFESIVNF
>Mature_394_residues
MNIKEYTKKDGTKVYRANVYLGVDSLTGKQVRKVITAKSEKMCNTKISRAINEFEKNGQTVRKVSVDDFKDIAMLWFDSY
KLGVKPRTVQIMQTRLNNYVLPALGEYRIDKVNSIILQQIVNQWMINASQPLNGAYHRPKGKGKDFKIYFNIVERIFKHA
LSLGLVKDNPCVNVIVPKVRLESTEKKVKHLTAEQLKIFFEYIGALPKEKYTNELMTGLCRLLVASGLRIGEAVALSWSD
IDFKTGSVSVSKTTLRAVIQSTPKTDKSNRIVLIDSKAVEVLKHWELFQAKYFMSIGKGKQELVFPNRTGGVLDYQTMRP
FLIKWLRACQLPQVGFHGFRHSHASLLLNADVPYKEIQERLGHASIKMTMDTYSHLESDNKIKAVERFESIVNF

Specific function: Putative integrase that is involved in the insertion of the integrative and conjugative element ICEBs1. Required for the excision of ICEBs1 from the donor cell genome and subsequent integration in the recipient cell genome. Appears not to be transferred t

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 45028; Mature: 45028

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKEYTKKDGTKVYRANVYLGVDSLTGKQVRKVITAKSEKMCNTKISRAINEFEKNGQT
CCCHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
VRKVSVDDFKDIAMLWFDSYKLGVKPRTVQIMQTRLNNYVLPALGEYRIDKVNSIILQQI
EEEECHHHHHHHHHHHHHCEECCCCCHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHHH
VNQWMINASQPLNGAYHRPKGKGKDFKIYFNIVERIFKHALSLGLVKDNPCVNVIVPKVR
HHHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCH
LESTEKKVKHLTAEQLKIFFEYIGALPKEKYTNELMTGLCRLLVASGLRIGEAVALSWSD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
IDFKTGSVSVSKTTLRAVIQSTPKTDKSNRIVLIDSKAVEVLKHWELFQAKYFMSIGKGK
CCCCCCCEEHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCC
QELVFPNRTGGVLDYQTMRPFLIKWLRACQLPQVGFHGFRHSHASLLLNADVPYKEIQER
CEEECCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEECCCCHHHHHHH
LGHASIKMTMDTYSHLESDNKIKAVERFESIVNF
HCCCEEEEEHHHHHHCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIKEYTKKDGTKVYRANVYLGVDSLTGKQVRKVITAKSEKMCNTKISRAINEFEKNGQT
CCCHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
VRKVSVDDFKDIAMLWFDSYKLGVKPRTVQIMQTRLNNYVLPALGEYRIDKVNSIILQQI
EEEECHHHHHHHHHHHHHCEECCCCCHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHHH
VNQWMINASQPLNGAYHRPKGKGKDFKIYFNIVERIFKHALSLGLVKDNPCVNVIVPKVR
HHHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCH
LESTEKKVKHLTAEQLKIFFEYIGALPKEKYTNELMTGLCRLLVASGLRIGEAVALSWSD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
IDFKTGSVSVSKTTLRAVIQSTPKTDKSNRIVLIDSKAVEVLKHWELFQAKYFMSIGKGK
CCCCCCCEEHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCC
QELVFPNRTGGVLDYQTMRPFLIKWLRACQLPQVGFHGFRHSHASLLLNADVPYKEIQER
CEEECCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEECCCCHHHHHHH
LGHASIKMTMDTYSHLESDNKIKAVERFESIVNF
HCCCEEEEEHHHHHHCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]