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The map label for this gene is omcB

Identifier: 15835342

GI number: 15835342

Start: 864582

End: 866246

Strand: Reverse

Name: omcB

Synonym: TC0727

Alternate gene names: 15835342

Gene position: 866246-864582 (Counterclockwise)

Preceding gene: 15835343

Following gene: 15835341

Centisome position: 80.73

GC content: 41.44

Gene sequence:

>1665_bases
ATGCGAATAGGAGATCCTATGAACAAACTCATCAGACGAGCTGTGACGATCTTCGCGGTGACTAGTGTGGCGAGTTTATT
TGCTAGCGGGGTGTTAGAGACCTCTATGGCAGAGTCTCTCTCTACCAACGTTATTAGCTTAGCTGACACCAAAGCGAAAG
AGACCACTTCTCATCAAAAAGACAGAAAAGCAAGAAAAAATCATCAAAATAGGACTTCCGTAGTCCGTAAAGAGGTTACT
GCAGTTCGTGATACTAAAGCTGTAGAGCCTAGACAGGATTCTTGCTTTGGCAAAATGTATACAGTCAAAGTTAATGATGA
TCGTAATGTAGAAATCGTGCAGTCCGTTCCTGAATATGCTACGGTAGGATCTCCATATCCTATTGAGATTACTGCTATAG
GGAAAAGAGACTGTGTTGATGTAATCATTACACAGCAATTACCATGCGAAGCAGAGTTTGTTAGCAGTGATCCAGCTACT
ACTCCTACTGCTGATGGTAAGCTAGTTTGGAAAATTGATCGGTTAGGACAGGGCGAAAAGAGTAAAATTACTGTATGGGT
AAAACCTCTTAAAGAAGGTTGCTGCTTTACAGCTGCAACGGTTTGTGCTTGTCCAGAGATCCGTTCGGTTACGAAATGTG
GCCAGCCTGCTATCTGTGTTAAACAGGAAGGTCCAGAAAGCGCATGTTTGCGTTGCCCAGTAACTTATAGAATTAATGTA
GTCAACCAAGGAACAGCAACAGCACGTAATGTTGTTGTGGAAAATCCTGTTCCAGATGGCTATGCTCATGCATCCGGACA
GCGTGTATTGACATATACTCTTGGGGATATGCAACCTGGAGAACAGAGAACAATCACCGTGGAGTTTTGTCCGCTTAAAC
GTGGTCGAGTCACAAATATTGCTACAGTTTCTTACTGTGGTGGACACAAAAATACTGCTAGCGTAACAACAGTGATCAAT
GAGCCTTGCGTGCAAGTTAACATCGAGGGAGCAGATTGGTCTTATGTTTGTAAGCCTGTAGAATATGTTATCTCTGTTTC
TAACCCTGGTGACTTAGTTTTACGAGACGTTGTAATTGAAGATACGCTTTCTCCTGGAATAACTGTTGTTGAAGCAGCTG
GAGCTCAGATTTCTTGTAATAAATTGGTTTGGACTTTGAAGGAACTCAATCCTGGAGAGTCTTTACAATATAAGGTTCTA
GTAAGAGCTCAAACTCCAGGGCAATTCACAAACAACGTTGTTGTGAAAAGTTGCTCTGATTGCGGTATTTGTACTTCTTG
CGCAGAAGCAACAACTTACTGGAAAGGAGTTGCTGCTACTCATATGTGCGTAGTAGATACTTGTGATCCTATTTGCGTAG
GAGAGAACACTGTTTATCGTATCTGTGTGACAAACAGAGGTTCTGCTGAAGATACAAATGTGTCCTTAATTTTGAAATTC
TCTAAAGAATTACAACCTATATCTTTCTCTGGACCAACTAAAGGAACCATTACAGGAAACACGGTAGTGTTTGATTCGTT
ACCTAGATTAGGTTCTAAAGAAACTGTAGAGTTTTCTGTAACGTTGAAAGCAGTATCCGCTGGAGATGCTCGTGGGGAAG
CTATTCTTTCTTCCGATACATTGACAGTTCCTGTATCTGATACGGAGAATACACATATCTATTAA

Upstream 100 bases:

>100_bases
AAATGCTTTTCCTTACTAACTATTTCGGATAAAAGAAAAATGTGTAGGGTAAAAGTTAGTTAATAACAATTTCTACCCGA
TGGCAGACAAAAAATAATCT

Downstream 100 bases:

>100_bases
TCTTTGAATTTCAAATAGATGTGTGAAAAAGCCGCCCAAGAGATGTCTTGGGCGGCTTTTTTTATTTTCTGAAAAAAAAT
ATTTTTTTCATTTTCCTGCT

Product: 60 kDa outer membrane protein

Products: NA

Alternate protein names: Large-CRP; 60 kDa CRP; 60 kDa outer membrane protein; Cysteine-rich outer membrane protein [H]

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MRIGDPMNKLIRRAVTIFAVTSVASLFASGVLETSMAESLSTNVISLADTKAKETTSHQKDRKARKNHQNRTSVVRKEVT
AVRDTKAVEPRQDSCFGKMYTVKVNDDRNVEIVQSVPEYATVGSPYPIEITAIGKRDCVDVIITQQLPCEAEFVSSDPAT
TPTADGKLVWKIDRLGQGEKSKITVWVKPLKEGCCFTAATVCACPEIRSVTKCGQPAICVKQEGPESACLRCPVTYRINV
VNQGTATARNVVVENPVPDGYAHASGQRVLTYTLGDMQPGEQRTITVEFCPLKRGRVTNIATVSYCGGHKNTASVTTVIN
EPCVQVNIEGADWSYVCKPVEYVISVSNPGDLVLRDVVIEDTLSPGITVVEAAGAQISCNKLVWTLKELNPGESLQYKVL
VRAQTPGQFTNNVVVKSCSDCGICTSCAEATTYWKGVAATHMCVVDTCDPICVGENTVYRICVTNRGSAEDTNVSLILKF
SKELQPISFSGPTKGTITGNTVVFDSLPRLGSKETVEFSVTLKAVSAGDARGEAILSSDTLTVPVSDTENTHIY

Sequences:

>Translated_554_residues
MRIGDPMNKLIRRAVTIFAVTSVASLFASGVLETSMAESLSTNVISLADTKAKETTSHQKDRKARKNHQNRTSVVRKEVT
AVRDTKAVEPRQDSCFGKMYTVKVNDDRNVEIVQSVPEYATVGSPYPIEITAIGKRDCVDVIITQQLPCEAEFVSSDPAT
TPTADGKLVWKIDRLGQGEKSKITVWVKPLKEGCCFTAATVCACPEIRSVTKCGQPAICVKQEGPESACLRCPVTYRINV
VNQGTATARNVVVENPVPDGYAHASGQRVLTYTLGDMQPGEQRTITVEFCPLKRGRVTNIATVSYCGGHKNTASVTTVIN
EPCVQVNIEGADWSYVCKPVEYVISVSNPGDLVLRDVVIEDTLSPGITVVEAAGAQISCNKLVWTLKELNPGESLQYKVL
VRAQTPGQFTNNVVVKSCSDCGICTSCAEATTYWKGVAATHMCVVDTCDPICVGENTVYRICVTNRGSAEDTNVSLILKF
SKELQPISFSGPTKGTITGNTVVFDSLPRLGSKETVEFSVTLKAVSAGDARGEAILSSDTLTVPVSDTENTHIY
>Mature_554_residues
MRIGDPMNKLIRRAVTIFAVTSVASLFASGVLETSMAESLSTNVISLADTKAKETTSHQKDRKARKNHQNRTSVVRKEVT
AVRDTKAVEPRQDSCFGKMYTVKVNDDRNVEIVQSVPEYATVGSPYPIEITAIGKRDCVDVIITQQLPCEAEFVSSDPAT
TPTADGKLVWKIDRLGQGEKSKITVWVKPLKEGCCFTAATVCACPEIRSVTKCGQPAICVKQEGPESACLRCPVTYRINV
VNQGTATARNVVVENPVPDGYAHASGQRVLTYTLGDMQPGEQRTITVEFCPLKRGRVTNIATVSYCGGHKNTASVTTVIN
EPCVQVNIEGADWSYVCKPVEYVISVSNPGDLVLRDVVIEDTLSPGITVVEAAGAQISCNKLVWTLKELNPGESLQYKVL
VRAQTPGQFTNNVVVKSCSDCGICTSCAEATTYWKGVAATHMCVVDTCDPICVGENTVYRICVTNRGSAEDTNVSLILKF
SKELQPISFSGPTKGTITGNTVVFDSLPRLGSKETVEFSVTLKAVSAGDARGEAILSSDTLTVPVSDTENTHIY

Specific function: In elementary bodies (EBs, the infectious stage, which is able to survive outside the host cell) provides the structural integrity of the outer envelope through disulfide cross-links with the small cysteine-rich protein and the major outer membrane porin.

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003506
- InterPro:   IPR001434 [H]

Pfam domain/function: PF03504 Chlam_OMP6; PF01345 DUF11 [H]

EC number: NA

Molecular weight: Translated: 59785; Mature: 59785

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIGDPMNKLIRRAVTIFAVTSVASLFASGVLETSMAESLSTNVISLADTKAKETTSHQK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH
DRKARKNHQNRTSVVRKEVTAVRDTKAVEPRQDSCFGKMYTVKVNDDRNVEIVQSVPEYA
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCHH
TVGSPYPIEITAIGKRDCVDVIITQQLPCEAEFVSSDPATTPTADGKLVWKIDRLGQGEK
HCCCCCCEEEEEECCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCC
SKITVWVKPLKEGCCFTAATVCACPEIRSVTKCGQPAICVKQEGPESACLRCPVTYRINV
CEEEEEEEECCCCCHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCCCCEEECCEEEEEEE
VNQGTATARNVVVENPVPDGYAHASGQRVLTYTLGDMQPGEQRTITVEFCPLKRGRVTNI
EECCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCCEEEE
ATVSYCGGHKNTASVTTVINEPCVQVNIEGADWSYVCKPVEYVISVSNPGDLVLRDVVIE
EEEEECCCCCCCCEEEEEECCCEEEEEECCCCCCEEECEEEEEEEECCCCCEEEEEEEEC
DTLSPGITVVEAAGAQISCNKLVWTLKELNPGESLQYKVLVRAQTPGQFTNNVVVKSCSD
CCCCCCEEEEEECCCEEECHHEEEEEECCCCCCCEEEEEEEEECCCCCCCCCEEEECCCC
CGICTSCAEATTYWKGVAATHMCVVDTCDPICVGENTVYRICVTNRGSAEDTNVSLILKF
CCCHHHHHHHHHHHCCHHHEEEEEEECCCCEEECCCCEEEEEEECCCCCCCCCEEEEEEE
SKELQPISFSGPTKGTITGNTVVFDSLPRLGSKETVEFSVTLKAVSAGDARGEAILSSDT
CCCCCCEECCCCCCCEEECCEEEEECCCCCCCCCEEEEEEEEEEEECCCCCCCEEEECCE
LTVPVSDTENTHIY
EEEEECCCCCCCCC
>Mature Secondary Structure
MRIGDPMNKLIRRAVTIFAVTSVASLFASGVLETSMAESLSTNVISLADTKAKETTSHQK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH
DRKARKNHQNRTSVVRKEVTAVRDTKAVEPRQDSCFGKMYTVKVNDDRNVEIVQSVPEYA
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCHH
TVGSPYPIEITAIGKRDCVDVIITQQLPCEAEFVSSDPATTPTADGKLVWKIDRLGQGEK
HCCCCCCEEEEEECCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCC
SKITVWVKPLKEGCCFTAATVCACPEIRSVTKCGQPAICVKQEGPESACLRCPVTYRINV
CEEEEEEEECCCCCHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCCCCEEECCEEEEEEE
VNQGTATARNVVVENPVPDGYAHASGQRVLTYTLGDMQPGEQRTITVEFCPLKRGRVTNI
EECCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCCEEEE
ATVSYCGGHKNTASVTTVINEPCVQVNIEGADWSYVCKPVEYVISVSNPGDLVLRDVVIE
EEEEECCCCCCCCEEEEEECCCEEEEEECCCCCCEEECEEEEEEEECCCCCEEEEEEEEC
DTLSPGITVVEAAGAQISCNKLVWTLKELNPGESLQYKVLVRAQTPGQFTNNVVVKSCSD
CCCCCCEEEEEECCCEEECHHEEEEEECCCCCCCEEEEEEEEECCCCCCCCCEEEECCCC
CGICTSCAEATTYWKGVAATHMCVVDTCDPICVGENTVYRICVTNRGSAEDTNVSLILKF
CCCHHHHHHHHHHHCCHHHEEEEEEECCCCEEECCCCEEEEEEECCCCCCCCCEEEEEEE
SKELQPISFSGPTKGTITGNTVVFDSLPRLGSKETVEFSVTLKAVSAGDARGEAILSSDT
CCCCCCEECCCCCCCEEECCEEEEECCCCCCCCCEEEEEEEEEEEECCCCCCCEEEECCE
LTVPVSDTENTHIY
EEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10684935 [H]