| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15835326
GI number: 15835326
Start: 849692
End: 850492
Strand: Direct
Name: Not Available
Synonym: TC0711
Alternate gene names: NA
Gene position: 849692-850492 (Clockwise)
Preceding gene: 15835325
Following gene: 15835327
Centisome position: 79.19
GC content: 39.33
Gene sequence:
>801_bases ATGTCTCGTCAGTTCCGCTCTTGTTTAACTGTTGGGTGTGTATGCTACGTTAACGCCCTACCTTTTTCTATTGGGTTGTC CCAAGCTCCAGGAGTTTCTCTCCAGACGGATACGCCATCTAATCTGGTTTCTAAGCTACTTTCAAAGGAAATTGATTATG CATTAACTTCAGTAATAGCGAAATTTTCTTCTCCATTACACCAAGTTTCCTTTTTTGGAATTGCTGCCTATCAAAAAATC TTAAGTGTGAACTTACATGCCACGCCTCAATTTTTTGCTAAAGAGGCTCCACGTATAGCTGCTACCAAAGAAAGTCGCTC TTCAATTGCACTTATGCGCATTCTTTGCAAGAATCTTTGGAAAATTCCGTTTCCTTCCATTACCCTTCTTTCTTCAAAGG AAATTCTTGATCAAGTAGAGCTGTACGATGCTTTATTATTAATAGGAGATACAGCTCTCCACCACCAGATCATTCCTGGA TTTCAAACTTATGACCTAGTAACTTCTTGGCATGACCTTACATCAAAACCATTCGTTTTTGCTGGAGTTCTTAGCCATTC TTCAACCCTTCCGTTGCAACTTCAGCAAGAATTTTTTTCTTCCCTCCATTATTTCCAAGATCATAGGGAGGAAATCTGGA GAAAAGCAGCCGCATTACTGAAGCTTCCAGAGTCACTAATGCAGCAATATTACTCTTTATGTCGTTACGAACTTTCTGAA GAAGATTTTGCAGGTTTACAACAGTTTAAGAACTATTATGACAAACTTCCAAGACAAGCCGAACATCCGAATCATGTTTG A
Upstream 100 bases:
>100_bases ATCTAGGAGAAAAGGTTTTTCAAATGTCCTCTTCCAAAGAGCCCATCCGAATGGACATTGAAGGGATGGCTAAGCTGATT ACGCAACAAGGTCGTATCCC
Downstream 100 bases:
>100_bases TTCCCTAGCACCCACCTACGATAAAATTAATAAAATTCTGTCGTTAGGTTTGCACCTCACATGGAATCATTCTTTTGTTT CTCTTTTAGGTAGATCTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MSRQFRSCLTVGCVCYVNALPFSIGLSQAPGVSLQTDTPSNLVSKLLSKEIDYALTSVIAKFSSPLHQVSFFGIAAYQKI LSVNLHATPQFFAKEAPRIAATKESRSSIALMRILCKNLWKIPFPSITLLSSKEILDQVELYDALLLIGDTALHHQIIPG FQTYDLVTSWHDLTSKPFVFAGVLSHSSTLPLQLQQEFFSSLHYFQDHREEIWRKAAALLKLPESLMQQYYSLCRYELSE EDFAGLQQFKNYYDKLPRQAEHPNHV
Sequences:
>Translated_266_residues MSRQFRSCLTVGCVCYVNALPFSIGLSQAPGVSLQTDTPSNLVSKLLSKEIDYALTSVIAKFSSPLHQVSFFGIAAYQKI LSVNLHATPQFFAKEAPRIAATKESRSSIALMRILCKNLWKIPFPSITLLSSKEILDQVELYDALLLIGDTALHHQIIPG FQTYDLVTSWHDLTSKPFVFAGVLSHSSTLPLQLQQEFFSSLHYFQDHREEIWRKAAALLKLPESLMQQYYSLCRYELSE EDFAGLQQFKNYYDKLPRQAEHPNHV >Mature_265_residues SRQFRSCLTVGCVCYVNALPFSIGLSQAPGVSLQTDTPSNLVSKLLSKEIDYALTSVIAKFSSPLHQVSFFGIAAYQKIL SVNLHATPQFFAKEAPRIAATKESRSSIALMRILCKNLWKIPFPSITLLSSKEILDQVELYDALLLIGDTALHHQIIPGF QTYDLVTSWHDLTSKPFVFAGVLSHSSTLPLQLQQEFFSSLHYFQDHREEIWRKAAALLKLPESLMQQYYSLCRYELSEE DFAGLQQFKNYYDKLPRQAEHPNHV
Specific function: Unknown
COG id: COG1427
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30177; Mature: 30046
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRQFRSCLTVGCVCYVNALPFSIGLSQAPGVSLQTDTPSNLVSKLLSKEIDYALTSVIA CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH KFSSPLHQVSFFGIAAYQKILSVNLHATPQFFAKEAPRIAATKESRSSIALMRILCKNLW HHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHH KIPFPSITLLSSKEILDQVELYDALLLIGDTALHHQIIPGFQTYDLVTSWHDLTSKPFVF CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHH AGVLSHSSTLPLQLQQEFFSSLHYFQDHREEIWRKAAALLKLPESLMQQYYSLCRYELSE HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH EDFAGLQQFKNYYDKLPRQAEHPNHV HHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SRQFRSCLTVGCVCYVNALPFSIGLSQAPGVSLQTDTPSNLVSKLLSKEIDYALTSVIA CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH KFSSPLHQVSFFGIAAYQKILSVNLHATPQFFAKEAPRIAATKESRSSIALMRILCKNLW HHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHH KIPFPSITLLSSKEILDQVELYDALLLIGDTALHHQIIPGFQTYDLVTSWHDLTSKPFVF CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHH AGVLSHSSTLPLQLQQEFFSSLHYFQDHREEIWRKAAALLKLPESLMQQYYSLCRYELSE HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH EDFAGLQQFKNYYDKLPRQAEHPNHV HHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA