| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835173
GI number: 15835173
Start: 663431
End: 665503
Strand: Reverse
Name: Not Available
Synonym: TC0556
Alternate gene names: NA
Gene position: 665503-663431 (Counterclockwise)
Preceding gene: 15835174
Following gene: 15835172
Centisome position: 62.03
GC content: 37.72
Gene sequence:
>2073_bases TTGTTAGCGTTTTTTAACAAACATCAAAAGAAATTTATCGGATTAGTTATCGCTGGCGTTTGTTTATCTGGAGTTGGCGT AGGTATTGGTCAGACCTTTAAAAAAACGCAAAAATTCGGGTCTAACAAAACCGTTTATAAAACTCCATCGGGTAGAAAAT ACTCTGAAAAAGAATTTTTTCTTTTAAAACGGTTTTTATCTAACGAAGCTTATCCTTTTACTGGTAATCCCAAAGAATGG AATTTTCTTAATGAAGGGGTATTAACGGAGCGTTTCTTAACGAATAAATTAGGAGAGAAATTATTTCTTAGTGTGTACAA GTCAGGGTTCCCTGCTTTCGATAAGGAACGGAGCTATGAGGGGTATCGGCGTTTTGATGCTCCTTTTATTTCTTCTGAAG AAGTTTGGAAATCCTCCGCTCCTCAATTACGAGATGCTTTTCATATATTCCAACAATTAGAAAACCCAGTTTCTCCGGAA GGGTTTGCTGCTAGAGTAAGGTTATTCTTAGAAGAAAAAAAATTCCCTCATTATGTCCTTAGACAAATGTTAGAATATCG TCGCCAGATGTTTAATCTTCCGGTAGACGGCTCTTTGGCGCAAGGCCGGGACTTGCGTTTGTTTGGATATCGTAATATTA AAGATTGGTTTGGAGATAGGTATGTTTCTGCAGTAACAGAAGCGGTGTTACGTTTCATAGATGAGCAGAAAAAGAACATC GCAATGCCATCTTTGAAAGAAGCTCAGCAGGATTTCTATGATAAAGCACAACAGGCTTTCTTGAGACTCAGTAGGCATGC GGAGTTTAATCTGACATTAGATCAGCTAGTTTCTTCTTTTTACTCTTTTATGGGAGTTGAAGAAGCAGAGTTTATCCGTA TGTATCGAGAAATTTTGTTATATAAAAGAGCTCTTTTAGCATTGGAAGGTGCTGTTGCCTTTGACTTCTATCCTTTACAG AAATTCTTTTCTATGGGGAAAGATACGGTCTCTGTAGAAATGTTTCATTTACCAGAAACTTTAGTCTTTAAGGATAAAGA AGATTTAGAGGCTTTTGAGACATATCTCAGTTTAGTAGCCGCGCCTTCGAGTCATATCTTAGACGTTCAAACGAAATTGC TTCCTATCGAAAAGGTAAAAAGCAAAGCTGAGTGTTTGGTAGGGAAGAGATTTTCTGTTTGTTATCGACGTGTGAAACTC TCGGAACTTGAAAAATATATCCCTATGGCTCAGGTATACCAGTGGTATCAGAATCCCGAGAATTTCGAAGAAATTTTATT AGAGTTTCCTGAACTAGAGACGTGTTCTTCTCTTCGTGATGTCTTGAATTTGAAACCAGCAATCGTAGAGAGAGCGCATT CTTATGTAAGGAAGGCGATTCTTCGAGCTGATTTAGGAATCATTCAGTCTGAGTTAGCTAAGCAAGAGCAAAAAGAAGAG GAGCTTTTCTTATCTTTAGGGCCAGATCATCTATTGCCTGGCATTCAAAATGGAGTTCGTCTGGCTAACGTTTTGATGCA GCAAGATTCCGTTGATTACTATACACAGGACGATGAATATTTTTATTCTATCATTGTAAAAAATCGTACTGGTACGGATG AGGTATTGCCTTATAAGGAAGTAGTTCGTAAGGGGCTGAAGAAAGTTTTGCTAGAACGTTATAAAGCAGAAGAGCGCATT ACTAGGGTCTTGGCTCATTTACAAGAGGCTTTCCCTAATTGTCAGGGCAAGGATCTCTATCAAAGACGTTTAATTAGATT TGTTAAGTCGCTTCAATCTGGAAGATTTTCTCAAGGAGATCTGTTCTGGGGATTGGAGAAAACTGTGAAGACGTTTTCTA GAGGAGATCAAGGAGTCCCTCAAGAGTTTGAAGAAATGCTGGCCTTGAAAGAAGGGCAAGTATCGGATGTATTATTTGAT TCGGATAAAGGTCCTTTCTATTATACCTTTATCTCAAAAACTTATTGCGATTATCCGGTAAGTTTAGACAAATTGCTGTT TGCAAAAAATCATTTGAATGAAGAGCTTTTAAGACCTTATTTATCAGAGATTTTTTTCCAAAACGAGAGTTAG
Upstream 100 bases:
>100_bases ACCATGAGGCATTCTGGGGAAAACTCCTTCCCCATTAAGGAATCCTATAAGAGTAGATTTCCTTTTTTCTTAATAAATTT TCTCAAAAAAGAAGGGCCTC
Downstream 100 bases:
>100_bases AAATATTGAAATTGAATGGGACATGTATGAAAGGTAAAAAATATTATTCCGACTACCATGTATGGATAGAGCCTATTCAT TCTCAAATTGTGAGACTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 690; Mature: 690
Protein sequence:
>690_residues MLAFFNKHQKKFIGLVIAGVCLSGVGVGIGQTFKKTQKFGSNKTVYKTPSGRKYSEKEFFLLKRFLSNEAYPFTGNPKEW NFLNEGVLTERFLTNKLGEKLFLSVYKSGFPAFDKERSYEGYRRFDAPFISSEEVWKSSAPQLRDAFHIFQQLENPVSPE GFAARVRLFLEEKKFPHYVLRQMLEYRRQMFNLPVDGSLAQGRDLRLFGYRNIKDWFGDRYVSAVTEAVLRFIDEQKKNI AMPSLKEAQQDFYDKAQQAFLRLSRHAEFNLTLDQLVSSFYSFMGVEEAEFIRMYREILLYKRALLALEGAVAFDFYPLQ KFFSMGKDTVSVEMFHLPETLVFKDKEDLEAFETYLSLVAAPSSHILDVQTKLLPIEKVKSKAECLVGKRFSVCYRRVKL SELEKYIPMAQVYQWYQNPENFEEILLEFPELETCSSLRDVLNLKPAIVERAHSYVRKAILRADLGIIQSELAKQEQKEE ELFLSLGPDHLLPGIQNGVRLANVLMQQDSVDYYTQDDEYFYSIIVKNRTGTDEVLPYKEVVRKGLKKVLLERYKAEERI TRVLAHLQEAFPNCQGKDLYQRRLIRFVKSLQSGRFSQGDLFWGLEKTVKTFSRGDQGVPQEFEEMLALKEGQVSDVLFD SDKGPFYYTFISKTYCDYPVSLDKLLFAKNHLNEELLRPYLSEIFFQNES
Sequences:
>Translated_690_residues MLAFFNKHQKKFIGLVIAGVCLSGVGVGIGQTFKKTQKFGSNKTVYKTPSGRKYSEKEFFLLKRFLSNEAYPFTGNPKEW NFLNEGVLTERFLTNKLGEKLFLSVYKSGFPAFDKERSYEGYRRFDAPFISSEEVWKSSAPQLRDAFHIFQQLENPVSPE GFAARVRLFLEEKKFPHYVLRQMLEYRRQMFNLPVDGSLAQGRDLRLFGYRNIKDWFGDRYVSAVTEAVLRFIDEQKKNI AMPSLKEAQQDFYDKAQQAFLRLSRHAEFNLTLDQLVSSFYSFMGVEEAEFIRMYREILLYKRALLALEGAVAFDFYPLQ KFFSMGKDTVSVEMFHLPETLVFKDKEDLEAFETYLSLVAAPSSHILDVQTKLLPIEKVKSKAECLVGKRFSVCYRRVKL SELEKYIPMAQVYQWYQNPENFEEILLEFPELETCSSLRDVLNLKPAIVERAHSYVRKAILRADLGIIQSELAKQEQKEE ELFLSLGPDHLLPGIQNGVRLANVLMQQDSVDYYTQDDEYFYSIIVKNRTGTDEVLPYKEVVRKGLKKVLLERYKAEERI TRVLAHLQEAFPNCQGKDLYQRRLIRFVKSLQSGRFSQGDLFWGLEKTVKTFSRGDQGVPQEFEEMLALKEGQVSDVLFD SDKGPFYYTFISKTYCDYPVSLDKLLFAKNHLNEELLRPYLSEIFFQNES >Mature_690_residues MLAFFNKHQKKFIGLVIAGVCLSGVGVGIGQTFKKTQKFGSNKTVYKTPSGRKYSEKEFFLLKRFLSNEAYPFTGNPKEW NFLNEGVLTERFLTNKLGEKLFLSVYKSGFPAFDKERSYEGYRRFDAPFISSEEVWKSSAPQLRDAFHIFQQLENPVSPE GFAARVRLFLEEKKFPHYVLRQMLEYRRQMFNLPVDGSLAQGRDLRLFGYRNIKDWFGDRYVSAVTEAVLRFIDEQKKNI AMPSLKEAQQDFYDKAQQAFLRLSRHAEFNLTLDQLVSSFYSFMGVEEAEFIRMYREILLYKRALLALEGAVAFDFYPLQ KFFSMGKDTVSVEMFHLPETLVFKDKEDLEAFETYLSLVAAPSSHILDVQTKLLPIEKVKSKAECLVGKRFSVCYRRVKL SELEKYIPMAQVYQWYQNPENFEEILLEFPELETCSSLRDVLNLKPAIVERAHSYVRKAILRADLGIIQSELAKQEQKEE ELFLSLGPDHLLPGIQNGVRLANVLMQQDSVDYYTQDDEYFYSIIVKNRTGTDEVLPYKEVVRKGLKKVLLERYKAEERI TRVLAHLQEAFPNCQGKDLYQRRLIRFVKSLQSGRFSQGDLFWGLEKTVKTFSRGDQGVPQEFEEMLALKEGQVSDVLFD SDKGPFYYTFISKTYCDYPVSLDKLLFAKNHLNEELLRPYLSEIFFQNES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80428; Mature: 80428
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAFFNKHQKKFIGLVIAGVCLSGVGVGIGQTFKKTQKFGSNKTVYKTPSGRKYSEKEFF CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHH LLKRFLSNEAYPFTGNPKEWNFLNEGVLTERFLTNKLGEKLFLSVYKSGFPAFDKERSYE HHHHHHCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GYRRFDAPFISSEEVWKSSAPQLRDAFHIFQQLENPVSPEGFAARVRLFLEEKKFPHYVL HHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHH RQMLEYRRQMFNLPVDGSLAQGRDLRLFGYRNIKDWFGDRYVSAVTEAVLRFIDEQKKNI HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC AMPSLKEAQQDFYDKAQQAFLRLSRHAEFNLTLDQLVSSFYSFMGVEEAEFIRMYREILL CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH YKRALLALEGAVAFDFYPLQKFFSMGKDTVSVEMFHLPETLVFKDKEDLEAFETYLSLVA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHEECCHHHHHHHHHHHHHHH APSSHILDVQTKLLPIEKVKSKAECLVGKRFSVCYRRVKLSELEKYIPMAQVYQWYQNPE CCCCCEEHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC NFEEILLEFPELETCSSLRDVLNLKPAIVERAHSYVRKAILRADLGIIQSELAKQEQKEE HHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELFLSLGPDHLLPGIQNGVRLANVLMQQDSVDYYTQDDEYFYSIIVKNRTGTDEVLPYKE HHHHHCCCHHHCCCHHHHHHHHHHHHHCCCCCCEECCCCEEEEEEEECCCCCCCCCCHHH VVRKGLKKVLLERYKAEERITRVLAHLQEAFPNCQGKDLYQRRLIRFVKSLQSGRFSQGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC LFWGLEKTVKTFSRGDQGVPQEFEEMLALKEGQVSDVLFDSDKGPFYYTFISKTYCDYPV CHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHEEECCCCCEEEEEECCHHCCCCC SLDKLLFAKNHLNEELLRPYLSEIFFQNES CHHHHHHHHHHCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLAFFNKHQKKFIGLVIAGVCLSGVGVGIGQTFKKTQKFGSNKTVYKTPSGRKYSEKEFF CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHH LLKRFLSNEAYPFTGNPKEWNFLNEGVLTERFLTNKLGEKLFLSVYKSGFPAFDKERSYE HHHHHHCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GYRRFDAPFISSEEVWKSSAPQLRDAFHIFQQLENPVSPEGFAARVRLFLEEKKFPHYVL HHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHH RQMLEYRRQMFNLPVDGSLAQGRDLRLFGYRNIKDWFGDRYVSAVTEAVLRFIDEQKKNI HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC AMPSLKEAQQDFYDKAQQAFLRLSRHAEFNLTLDQLVSSFYSFMGVEEAEFIRMYREILL CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH YKRALLALEGAVAFDFYPLQKFFSMGKDTVSVEMFHLPETLVFKDKEDLEAFETYLSLVA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHEECCHHHHHHHHHHHHHHH APSSHILDVQTKLLPIEKVKSKAECLVGKRFSVCYRRVKLSELEKYIPMAQVYQWYQNPE CCCCCEEHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC NFEEILLEFPELETCSSLRDVLNLKPAIVERAHSYVRKAILRADLGIIQSELAKQEQKEE HHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELFLSLGPDHLLPGIQNGVRLANVLMQQDSVDYYTQDDEYFYSIIVKNRTGTDEVLPYKE HHHHHCCCHHHCCCHHHHHHHHHHHHHCCCCCCEECCCCEEEEEEEECCCCCCCCCCHHH VVRKGLKKVLLERYKAEERITRVLAHLQEAFPNCQGKDLYQRRLIRFVKSLQSGRFSQGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC LFWGLEKTVKTFSRGDQGVPQEFEEMLALKEGQVSDVLFDSDKGPFYYTFISKTYCDYPV CHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHEEECCCCCEEEEEECCHHCCCCC SLDKLLFAKNHLNEELLRPYLSEIFFQNES CHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA