| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835151
GI number: 15835151
Start: 643257
End: 644027
Strand: Direct
Name: Not Available
Synonym: TC0533
Alternate gene names: NA
Gene position: 643257-644027 (Clockwise)
Preceding gene: 15835150
Following gene: 15835152
Centisome position: 59.95
GC content: 40.08
Gene sequence:
>771_bases ATGACTTTCTCCGTAGCTTTTTCCCCTTGTCCAAATGATATTTTTTTGTTTAGGTCTTTCTTGGAAAAACATGAAGGGGC CCCTTCTTTGCGCCAAATTATGATCGCGGATATAGCCTCTTTAAATCACCTTGCTTTAGAAACTCGATTCTCTTTAATTA AAATCTCCGCGAGCCTATATCCCCGAATTGCAGATGCCTATCATGTTTTGGATGTTGGAACCACTTTAGGGCACAAGATA GGTCCGTTGGTTCTTTCTAAACATCCTGATAAGCTTTTAAGAACTCTCGCTACTCCAGGTGAAACAACAACGGCACATGC TCTTTGCCGACTGTTCTATCCGCAAACAGAACTAATTCCTATGAAATATCATGAGATCATCCCCGCTATCCTTGCAAATC AGGTAGACGGTGGAGCAGTAATTCATGAAGAACGTTTCTCTTTTCCAAAAGAGTTGTGCCTTGTGGACGATCTTGGTCAA CTTTGGGAAGAAAAGTGGCATCTTCCTTTACCTTTAGGATGTATTGCAATCTCTAAAGAGATTTCTGCTGATGACTCTTA TCGGTTAAATTATGCCCTTCTGAGATCCTTAAGGAGATCTTTAACAGAAAGCTCTTTGGCTATTCAAAAAGCTTCTGAGT ATTCTCGAGATAAAAATGCAGCTACTATCCAACGTTTTATTGATACTTATGTAACGGAAGAAACATTCTGTCTCTCACCT ATCGGAAGAGAAGCTCTCTCTACATTATGGACGGCTTGTCGTAATGTTTAA
Upstream 100 bases:
>100_bases TCCCTTCTAGTTACATTGCTTGGTTACAAAAAGGAGATTACCTGTTACAACCAGAGAATAAAGAAATTAAAGCAGCTATC GAGGCTTATCAACAACTCAA
Downstream 100 bases:
>100_bases ACTTCTTCTCATTTTTGCGGATCCTGTAGAGGCCTCTGAAACTCTTGCTCTTTTTCCTTTTTCCGCTCGTAGCGAATTCC TATATTCTTACTCCACAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MTFSVAFSPCPNDIFLFRSFLEKHEGAPSLRQIMIADIASLNHLALETRFSLIKISASLYPRIADAYHVLDVGTTLGHKI GPLVLSKHPDKLLRTLATPGETTTAHALCRLFYPQTELIPMKYHEIIPAILANQVDGGAVIHEERFSFPKELCLVDDLGQ LWEEKWHLPLPLGCIAISKEISADDSYRLNYALLRSLRRSLTESSLAIQKASEYSRDKNAATIQRFIDTYVTEETFCLSP IGREALSTLWTACRNV
Sequences:
>Translated_256_residues MTFSVAFSPCPNDIFLFRSFLEKHEGAPSLRQIMIADIASLNHLALETRFSLIKISASLYPRIADAYHVLDVGTTLGHKI GPLVLSKHPDKLLRTLATPGETTTAHALCRLFYPQTELIPMKYHEIIPAILANQVDGGAVIHEERFSFPKELCLVDDLGQ LWEEKWHLPLPLGCIAISKEISADDSYRLNYALLRSLRRSLTESSLAIQKASEYSRDKNAATIQRFIDTYVTEETFCLSP IGREALSTLWTACRNV >Mature_255_residues TFSVAFSPCPNDIFLFRSFLEKHEGAPSLRQIMIADIASLNHLALETRFSLIKISASLYPRIADAYHVLDVGTTLGHKIG PLVLSKHPDKLLRTLATPGETTTAHALCRLFYPQTELIPMKYHEIIPAILANQVDGGAVIHEERFSFPKELCLVDDLGQL WEEKWHLPLPLGCIAISKEISADDSYRLNYALLRSLRRSLTESSLAIQKASEYSRDKNAATIQRFIDTYVTEETFCLSPI GREALSTLWTACRNV
Specific function: Unknown
COG id: COG2107
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28758; Mature: 28627
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFSVAFSPCPNDIFLFRSFLEKHEGAPSLRQIMIADIASLNHLALETRFSLIKISASLY CEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHH PRIADAYHVLDVGTTLGHKIGPLVLSKHPDKLLRTLATPGETTTAHALCRLFYPQTELIP HHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC MKYHEIIPAILANQVDGGAVIHEERFSFPKELCLVDDLGQLWEEKWHLPLPLGCIAISKE HHHHHHHHHHHHCCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH ISADDSYRLNYALLRSLRRSLTESSLAIQKASEYSRDKNAATIQRFIDTYVTEETFCLSP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHCCCC IGREALSTLWTACRNV CCHHHHHHHHHHHHCC >Mature Secondary Structure TFSVAFSPCPNDIFLFRSFLEKHEGAPSLRQIMIADIASLNHLALETRFSLIKISASLY EEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHH PRIADAYHVLDVGTTLGHKIGPLVLSKHPDKLLRTLATPGETTTAHALCRLFYPQTELIP HHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC MKYHEIIPAILANQVDGGAVIHEERFSFPKELCLVDDLGQLWEEKWHLPLPLGCIAISKE HHHHHHHHHHHHCCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH ISADDSYRLNYALLRSLRRSLTESSLAIQKASEYSRDKNAATIQRFIDTYVTEETFCLSP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHCCCC IGREALSTLWTACRNV CCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA